Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa021608 Carpinus fangiana HOM05D003601 ORTHO05D004896 1.7e-167 592.8 341 100.0
Carub.0001s0088 Capsella rubella HOM05D003601 ORTHO05D004896 5.7e-43 179.1 249 39.0
SMO351G0471 Selaginella moellendorffii HOM05D003601 ORTHO05D004896 2.8e-42 176.8 184 46.7
Rhsim07G0005200 Rhododendron simsii HOM05D003601 ORTHO05D004896 4.9e-42 176.0 239 38.1
Sed0004785 Sechium edule HOM05D003601 ORTHO05D004896 1.8e-41 174.1 247 40.1
CSS0019404 Camellia sinensis var. sinensis HOM05D003601 ORTHO05D004896 3.1e-41 173.3 252 36.9
CSS0034548 Camellia sinensis var. sinensis HOM05D003601 ORTHO05D004896 3.1e-41 173.3 252 36.9
Ca_09198_v3 Cicer arietinum L. HOM05D003601 ORTHO05D004896 9.2e-41 171.8 230 37.8
Dinv18735 Davidia involucrata HOM05D003601 ORTHO05D004896 1.2e-40 171.4 239 37.2
BcaB03g13574 Brassica carinata HOM05D003601 ORTHO05D004896 3.5e-40 169.9 255 37.6
CiPaw.01G074700 Carya illinoinensis HOM05D003601 ORTHO05D004896 3.5e-40 169.9 239 38.1
Sabra14G0071300 Salix brachista HOM05D003601 ORTHO05D004896 4.5e-40 169.5 239 39.7
Medtr7g109250 Medicago truncatula HOM05D003601 ORTHO05D004896 7.8e-40 168.7 233 38.6
Aqoxy3G00289 Aquilegia oxysepala HOM05D003601 ORTHO05D004896 1.0e-39 168.3 242 37.6
Cfa003813 Carpinus fangiana HOM05D003601 ORTHO05D004896 1.0e-39 168.3 217 39.2
Nn2g12387 Nelumbo nucifera HOM05D003601 ORTHO05D004896 1.0e-39 168.3 237 37.1
Potri.014G097300 Populus trichocarpa HOM05D003601 ORTHO05D004896 1.3e-39 167.9 239 37.7
AT1G01350 Arabidopsis thaliana HOM05D003601 ORTHO05D004896 1.7e-39 167.5 205 41.5
ClCG08G004950 Citrullus lanatus HOM05D003601 ORTHO05D004896 1.7e-39 167.5 239 37.7
CANSAT11G0274 Cannabis sativa HOM05D003601 ORTHO05D004896 2.3e-39 167.2 233 39.1
unitig_0.g331 Utricularia gibba HOM05D003601 ORTHO05D004896 3.8e-39 166.4 258 38.4
TAR374G1433 Trochodendron aralioides HOM05D003601 ORTHO05D004896 5.0e-39 166.0 246 36.6
TAR374G1718 Trochodendron aralioides HOM05D003601 ORTHO05D004896 5.0e-39 166.0 246 36.6
AL1G11100 Arabidopsis lyrata HOM05D003601 ORTHO05D004896 6.6e-39 165.6 249 37.8
AT5G06420 Arabidopsis thaliana HOM05D003601 ORTHO05D004896 6.6e-39 165.6 251 37.5
Lalb_Chr04g0261591 Lupinus albus HOM05D003601 ORTHO05D004896 6.6e-39 165.6 248 37.1
Peaxi162Scf00130g01110 Petunia axillaris HOM05D003601 ORTHO05D004896 6.6e-39 165.6 253 36.0
arahy.Tifrunner.gnm1.ann1.EN9PMD Arachis hypogaea HOM05D003601 ORTHO05D004896 8.6e-39 165.2 259 36.3
AUR62016842 Chenopodium quinoa HOM05D003601 ORTHO05D004896 8.6e-39 165.2 252 36.5
Cc05_g04050 Coffea canephora HOM05D003601 ORTHO05D004896 8.6e-39 165.2 237 37.1
Lj1g0023495 Lotus japonicus HOM05D003601 ORTHO05D004896 8.6e-39 165.2 248 37.1
ATR1127G077 Amborella trichopoda HOM05D003601 ORTHO05D004896 1.1e-38 164.9 241 35.7
TWI59G1066 Tripterygium wilfordii HOM05D003601 ORTHO05D004896 1.1e-38 164.9 247 35.6
Migut.B01852 Erythranthe guttata HOM05D003601 ORTHO05D004896 1.5e-38 164.5 197 41.1
CsaV3_6G034170 Cucumis sativus L. HOM05D003601 ORTHO05D004896 1.9e-38 164.1 247 37.2
Mapoly0066s0113 Marchantia polymorpha HOM05D003601 ORTHO05D004896 1.9e-38 164.1 253 37.9
Haze_15640 Corylus avellana HOM05D003601 ORTHO05D004896 2.5e-38 163.7 246 36.6
ECA236G1416 Erigeron canadensis HOM05D003601 ORTHO05D004896 2.5e-38 163.7 253 36.4
Os02g0301000 Oryza sativa ssp. japonica HOM05D003601 ORTHO05D004896 2.5e-38 163.7 196 39.8
SHI13229 Sapria himalayana HOM05D003601 ORTHO05D004896 2.5e-38 163.7 254 35.4
vmacro23173 Vaccinium macrocarpon HOM05D003601 ORTHO05D004896 2.5e-38 163.7 265 35.1
Phvul.010G084000 Phaseolus vulgaris HOM05D003601 ORTHO05D004896 3.3e-38 163.3 234 38.0
Sp1g00940 Schrenkiella parvula HOM05D003601 ORTHO05D004896 3.3e-38 163.3 205 41.0
SEGI_12555 Sequoiadendron giganteum HOM05D003601 ORTHO05D004896 3.3e-38 163.3 255 38.4
Eucgr.D01238 Eucalyptus grandis HOM05D003601 ORTHO05D004896 4.3e-38 162.9 245 35.5
QL05p061139 Quercus lobata HOM05D003601 ORTHO05D004896 4.3e-38 162.9 239 36.8
Thecc.04G197100 Theobroma cacao HOM05D003601 ORTHO05D004896 4.3e-38 162.9 254 36.2
EL10Ac9g21625 Beta vulgaris HOM05D003601 ORTHO05D004896 5.6e-38 162.5 255 35.3
Manes.07G071780 Manihot esculenta HOM05D003601 ORTHO05D004896 5.6e-38 162.5 239 36.4
HPP92_024723 Vanilla planifolia HOM05D003601 ORTHO05D004896 7.3e-38 162.2 245 35.9
Thhalv10009432m.g Eutrema salsugineum HOM05D003601 ORTHO05D004896 9.5e-38 161.8 211 39.3
QL05p061428 Quercus lobata HOM05D003601 ORTHO05D004896 9.5e-38 161.8 239 36.4
MD07G1148000 Malus domestica HOM05D003601 ORTHO05D004896 1.2e-37 161.4 196 39.3
PRCOL_00000030 Prasinoderma coloniale HOM05D003601 ORTHO05D004896 1.2e-37 161.4 241 39.8
Aa31LG11G12300 Aethionema arabicum HOM05D003601 ORTHO05D004896 1.6e-37 161.0 252 36.5
COL.COLO4_20208 Corchorus olitorius HOM05D003601 ORTHO05D004896 1.6e-37 161.0 247 35.6
SGA_v2.0_scaffold5G03009 Striga asiatica HOM05D003601 ORTHO05D004896 1.6e-37 161.0 244 36.1
Atru.chr5.650 Acer truncatum HOM05D003601 ORTHO05D004896 2.1e-37 160.6 258 34.5
Pp3c8_16180 Physcomitrium patens HOM05D003601 ORTHO05D004896 2.1e-37 160.6 267 37.8
A10p00590 Brassica napus HOM05D003601 ORTHO05D004896 2.8e-37 160.2 257 36.2
CBR_g49220 Chara braunii HOM05D003601 ORTHO05D004896 2.8e-37 160.2 177 44.1
FAN02G3979 Fragaria x ananassa HOM05D004408 ORTHO05D005486 2.8e-37 160.2 242 35.5
VMungo0331G0886 Vigna mungo HOM05D003601 ORTHO05D004896 2.8e-37 160.2 252 36.1
BraA10t42337Z Brassica rapa HOM05D003601 ORTHO05D004896 3.6e-37 159.8 257 36.2
TAR375G0212 Trochodendron aralioides HOM05D003601 ORTHO05D004896 3.6e-37 159.8 152 44.1
CARHR001090 Cardamine hirsuta HOM05D003601 ORTHO05D004896 4.7e-37 159.5 253 36.0
MCO16G487 Micromonas commoda HOM05D003601 ORTHO05D004896 4.7e-37 159.5 236 39.8
Glyma.05G210600 Glycine max HOM05D003601 ORTHO05D004896 6.1e-37 159.1 250 34.8
HanXRQChr06g0170651 Helianthus annuus HOM05D003601 ORTHO05D004896 6.1e-37 159.1 257 33.9
BcaB03g13575 Brassica carinata HOM05D003601 ORTHO05D004896 8.0e-37 158.7 257 36.2
C05p00620 Brassica napus HOM05D003601 ORTHO05D004896 8.0e-37 158.7 257 36.2
BolC5t28850H Brassica oleracea HOM05D003601 ORTHO05D004896 8.0e-37 158.7 257 36.2
Cpa.g.sc273.4 Carica papaya HOM05D003601 ORTHO05D004896 8.0e-37 158.7 263 33.5
Duzib151G0301 Durio zibethinus HOM05D003601 ORTHO05D004896 8.0e-37 158.7 243 35.8
FAN05G2697 Fragaria x ananassa HOM05D004408 ORTHO05D005486 8.0e-37 158.7 243 35.0
Manes.02G115900 Manihot esculenta HOM05D003601 ORTHO05D004896 8.0e-37 158.7 244 35.2
AagrBONN_evm.TU.Sc2ySwM_344.3813 Anthoceros agrestis HOM05D003601 ORTHO05D004896 1.4e-36 157.9 260 36.5
PGSC0003DMG400013655 Solanum tuberosum HOM05D003601 ORTHO05D004896 1.4e-36 157.9 257 34.2
FvH4_6g10411 Fragaria vesca HOM05D003601 ORTHO05D004896 1.8e-36 157.5 243 34.6
FAN14G0738 Fragaria x ananassa HOM05D003601 ORTHO05D004896 1.8e-36 157.5 243 34.6
MD01G1079100 Malus domestica HOM05D003601 ORTHO05D004896 1.8e-36 157.5 239 34.7
Glyma.03G025400 Glycine max HOM05D003601 ORTHO05D004896 2.3e-36 157.1 235 37.4
MD04G1169800 Malus domestica HOM05D003601 ORTHO05D004896 2.3e-36 157.1 239 35.1
FAN09G0115 Fragaria x ananassa HOM05D004408 ORTHO05D005486 3.0e-36 156.8 243 34.6
THA.LOC104812142 Tarenaya hassleriana HOM05D003601 ORTHO05D004896 3.0e-36 156.8 241 36.5
Gohir.A03G095300 Gossypium hirsutum HOM05D003601 ORTHO05D004896 4.0e-36 156.4 261 35.2
Peaxi162Scf01343g00152 Petunia axillaris HOM05D003601 ORTHO05D004896 4.0e-36 156.4 252 34.5
GSVIVG01027082001 Vitis vinifera HOM05D003601 ORTHO05D004896 4.0e-36 156.4 250 33.2
PGR042G1585 Punica granatum HOM05D003601 ORTHO05D004896 5.2e-36 156.0 198 38.4
DCAR_004784 Daucus carota HOM05D003601 ORTHO05D004896 6.8e-36 155.6 225 38.7
Gohir.D02G113600 Gossypium hirsutum HOM05D003601 ORTHO05D004896 6.8e-36 155.6 254 35.0
Nitab4.5_0010133g0020 Nicotiana tabacum HOM05D003601 ORTHO05D004896 6.8e-36 155.6 202 39.6
Hma1.2p1_0180F.1_g079650 Hydrangea macrophylla HOM05D003601 ORTHO05D004896 8.9e-36 155.2 218 40.4
Hund16704 Selenicereus undatus HOM05D003601 ORTHO05D004896 8.9e-36 155.2 239 33.9
QL01p016478 Quercus lobata HOM05D003601 ORTHO05D004896 1.2e-35 154.8 239 35.6
Prupe.6G288300 Prunus persica HOM05D003601 ORTHO05D004896 1.5e-35 154.5 234 36.3
Dinv32573 Davidia involucrata HOM05D003601 ORTHO05D004896 2.0e-35 154.1 217 37.3
Lsat_1_v5_gn_7_1360 Lactuca sativa HOM05D003601 ORTHO05D004896 2.0e-35 154.1 246 34.6
LjContig00564g0001173 Lotus japonicus HOM05D003601 ORTHO05D004896 2.0e-35 154.1 240 35.0
HanXRQChr04g0120251 Helianthus annuus HOM05D003601 ORTHO05D004896 3.4e-35 153.3 263 33.1
Cre06.g254650 Chlamydomonas reinhardtii HOM05D003601 ORTHO05D004896 4.4e-35 152.9 218 39.9
MELO3C010640.2 Cucumis melo HOM05D003601 ORTHO05D004896 4.4e-35 152.9 267 33.7
Zm00001eb204190 Zea mays HOM05D003601 ORTHO05D004896 4.4e-35 152.9 254 34.3
Glyma.08G286000 Glycine max HOM05D003601 ORTHO05D004896 7.5e-35 152.1 235 38.3
Peaxi162Scf00119g01222 Petunia axillaris HOM05D003601 ORTHO05D004896 9.8e-35 151.8 226 36.7
MSTRG.17333 Avicennia marina HOM05D003601 ORTHO05D004896 1.7e-34 151.0 246 32.9
PSO541G5643 Papaver somniferum HOM05D003601 ORTHO05D004896 1.7e-34 151.0 247 34.4
PSO675G3308 Papaver somniferum HOM05D003601 ORTHO05D004896 1.7e-34 151.0 247 34.4
Ciclev10021165m.g Citrus clementina HOM05D003601 ORTHO05D004896 2.2e-34 150.6 237 33.3
Haze_27631 Corylus avellana HOM05D003601 ORTHO05D004896 2.9e-34 150.2 152 44.1
RcHm_v2.0_Chr3g0492261 Rosa chinensis HOM05D003601 ORTHO05D004896 3.7e-34 149.8 244 33.6
Hma1.2p1_1566F.1_g291000 Hydrangea macrophylla HOM05D003601 ORTHO05D004896 2.4e-33 147.1 182 41.2
Gorai.005G129300 Gossypium raimondii HOM05D003601 ORTHO05D004896 3.2e-33 146.7 259 32.8
Sopen02g026770 Solanum pennellii HOM05D003601 ORTHO05D004896 3.2e-33 146.7 250 32.4
Ah.01g018710 Amaranthus hybridus HOM05D003601 ORTHO05D004896 4.1e-33 146.4 223 35.9
Lj8C0T4 Lonicera japonica HOM05D003601 ORTHO05D004896 1.2e-32 144.8 231 36.8
Peaxi162Scf00036g00412 Petunia axillaris HOM05D003601 ORTHO05D004896 3.5e-32 143.3 238 32.8
Lj8C4T0 Lonicera japonica HOM05D003601 ORTHO05D004896 4.6e-32 142.9 232 36.6
TPR.G20293 Trifolium pratense HOM05D003601 ORTHO05D004896 1.0e-31 141.7 239 33.9
Sed0000777 Sechium edule HOM05D003601 ORTHO05D004896 1.7e-31 141.0 213 38.5
Sc23g0002160 Simmondsia chinensis HOM05D003601 ORTHO05D004896 8.6e-31 138.7 223 35.9
QL05p063445 Quercus lobata HOM05D003601 ORTHO05D004896 3.6e-29 133.3 191 37.2
arahy.Tifrunner.gnm1.ann1.JS26LE Arachis hypogaea HOM05D003601 ORTHO05D004896 1.5e-27 127.9 255 32.2
CAN.G809.19 Capsicum annuum HOM05D003601 ORTHO05D004896 5.8e-27 125.9 222 32.4
Duzib212G0966 Durio zibethinus HOM05D003601 ORTHO05D004896 5.8e-27 125.9 243 35.0
COL.COLO4_33292 Corchorus olitorius HOM05D002650 ORTHO05D002924 1.3e-26 124.8 135 43.7
Nitab4.5_0001815g0040 Nicotiana tabacum HOM05D003601 ORTHO05D004896 3.7e-26 123.2 222 32.0
Nitab4.5_0000614g0020 Nicotiana tabacum HOM05D003601 ORTHO05D004896 4.9e-26 122.9 224 31.2
Nitab4.5_0005819g0040 Nicotiana tabacum HOM05D003601 ORTHO05D004896 1.3e-23 114.8 150 38.7
ECA247G1228 Erigeron canadensis HOM05D003601 ORTHO05D004896 1.7e-23 114.4 240 31.2
CDE08G1615 Ceratophyllum demersum HOM05D003601 ORTHO05D004896 4.7e-21 106.3 113 39.8
Aqoxy5G01484 Aquilegia oxysepala HOM05D003601 ORTHO05D004896 6.8e-20 102.4 154 35.7
Sc08g0001920 Simmondsia chinensis HOM05D003601 ORTHO05D004896 2.0e-19 100.9 122 37.7
Carub.0008s2038 Capsella rubella HOM05D003601 ORTHO05D004896 3.4e-19 100.1 144 36.1
Prupe.7G095500 Prunus persica HOM05D003601 ORTHO05D004896 5.8e-19 99.4 146 32.2
Medtr7g108868 Medicago truncatula HOM05D003601 ORTHO05D004896 1.1e-17 95.1 91 46.2
Medtr8g058593 Medicago truncatula HOM05D003601 ORTHO05D004896 1.1e-17 95.1 91 46.2
CBR_g26342 Chara braunii HOM05D003601 ORTHO05D004896 1.4e-17 94.7 126 33.3
EL10Ac5g12528 Beta vulgaris HOM05D003601 ORTHO05D004896 4.1e-17 93.2 143 37.8
AL6G52380 Arabidopsis lyrata HOM05D003601 ORTHO05D015895 2.1e-16 90.9 115 40.0
Actinidia10120 Actinidia chinensis HOM05D003601 ORTHO05D004896 2.7e-16 90.5 142 36.6
Medtr8g058607 Medicago truncatula HOM05D003601 ORTHO05D004896 2.7e-16 90.5 87 44.8
TPR.G29640 Trifolium pratense HOM05D003601 ORTHO05D004896 3.5e-16 90.1 66 53.0
PSO824G0013 Papaver somniferum HOM05D003601 ORTHO05D004896 7.8e-16 89.0 88 46.6
AagrBONN_evm.TU.Sc2ySwM_344.929 Anthoceros agrestis HOM05D003601 ORTHO05D004896 2.3e-15 87.4 94 44.7
CDE08G0937 Ceratophyllum demersum HOM05D003601 ORTHO05D004896 5.6e-14 82.8 43 65.1
BraA09t42245Z Brassica rapa HOM05D000288 ORTHO05D000173 7.3e-14 82.4 87 44.8
CARHR001100 Cardamine hirsuta HOM05D003601 ORTHO05D004896 7.3e-14 82.4 108 39.8
DCAR_004777 Daucus carota HOM05D003601 ORTHO05D004896 7.3e-14 82.4 226 29.6
AT4G01023 Arabidopsis thaliana HOM05D003601 ORTHO05D015895 9.5e-14 82.0 82 43.9
C02p38360 Brassica napus HOM05D003601 ORTHO05D015895 1.2e-13 81.6 79 45.6
Thecc.07G081100 Theobroma cacao HOM05D003601 ORTHO05D004896 2.8e-13 80.5 154 34.4
Thhalv10029283m.g Eutrema salsugineum HOM05D003601 ORTHO05D015895 1.1e-12 78.6 69 47.8
A02p24300 Brassica napus HOM05D003601 ORTHO05D015895 1.4e-12 78.2 69 46.4
BraA02t07420Z Brassica rapa HOM05D003601 ORTHO05D015895 1.4e-12 78.2 69 46.4
QL04p075812 Quercus lobata HOM05D003601 ORTHO05D004896 5.2e-12 76.3 88 37.5
vmacro10191 Vaccinium macrocarpon HOM05D003601 ORTHO05D004896 5.2e-12 76.3 142 31.7
vmacro20852 Vaccinium macrocarpon HOM05D003601 ORTHO05D004896 5.2e-12 76.3 142 31.7
Carub.0006s3606 Capsella rubella HOM05D003601 ORTHO05D015895 6.8e-12 75.9 105 39.0
CARHR249320 Cardamine hirsuta HOM05D003601 ORTHO05D015895 6.8e-12 75.9 69 49.3
QL05p061570 Quercus lobata HOM05D003601 ORTHO05D004896 1.5e-11 74.7 149 30.9
Sc08g0001910 Simmondsia chinensis HOM05D003601 ORTHO05D004896 1.5e-11 74.7 43 62.8
Sp6g01130 Schrenkiella parvula HOM05D003601 ORTHO05D015895 2.6e-11 73.9 67 47.8
BcaC03g16072 Brassica carinata HOM05D003601 ORTHO05D015895 5.8e-11 72.8 88 36.4
BolC2t09850H Brassica oleracea HOM05D003601 ORTHO05D015895 5.8e-11 72.8 88 36.4
Rhsim01G0171500 Rhododendron simsii HOM05D003601 ORTHO05D004896 5.4e-09 66.2 120 34.2
A01p41390 Brassica napus HOM05D003601 ORTHO05D023606 9.2e-09 65.5 83 37.3
BNapus_Darmor_BZH_scaffold_78p00320 Brassica napus HOM05D003601 ORTHO05D023606 9.2e-09 65.5 83 37.3
Actinidia20220 Actinidia chinensis HOM05D003601 ORTHO05D004896 1.0e-07 62.0 79 36.7


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