Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa020788 Carpinus fangiana HOM05D005762 ORTHO05D006823 3.4e-71 271.6 137 100.0
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 6.3e-49 197.6 110 91.8
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 7.2e-37 157.5 114 74.6
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 1.2e-36 156.8 112 76.8
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 2.1e-36 156.0 110 75.5
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 7.9e-36 154.1 110 72.7
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 7.9e-36 154.1 110 73.6
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 7.9e-36 154.1 111 72.1
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 2.3e-35 152.5 112 75.0
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 2.3e-35 152.5 110 73.6
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 6.7e-35 151.0 109 73.4
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 1.5e-34 149.8 110 73.6
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 3.3e-34 148.7 110 71.8
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 9.7e-34 147.1 109 71.6
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 1.3e-33 146.7 113 73.5
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 1.3e-33 146.7 112 72.3
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 2.2e-33 146.0 110 71.8
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 2.8e-33 145.6 110 73.6
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 2.8e-33 145.6 111 68.5
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 1.1e-32 143.7 110 70.9
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 1.4e-32 143.3 111 67.6
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 2.4e-32 142.5 110 71.8
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 2.4e-32 142.5 110 71.8
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 2.4e-32 142.5 110 72.7
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 2.4e-32 142.5 112 70.5
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 2.4e-32 142.5 109 71.6
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 4.1e-32 141.7 110 70.9
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 5.3e-32 141.4 111 69.4
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 1.2e-31 140.2 113 67.3
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 2.0e-31 139.4 110 70.9
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 2.0e-31 139.4 110 70.9
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 1.0e-30 137.1 110 71.8
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 1.7e-30 136.3 110 68.2
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 2.2e-30 136.0 110 66.4
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 2.9e-30 135.6 109 67.0
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 1.1e-29 133.7 112 67.9
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 1.4e-29 133.3 113 70.8
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 4.7e-28 128.3 121 61.2
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 1.4e-27 126.7 113 64.6
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 3.0e-27 125.6 111 64.0
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 3.9e-27 125.2 110 65.5
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 6.7e-27 124.4 113 64.6
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 8.8e-27 124.0 113 66.4
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 1.5e-26 123.2 112 67.9
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 4.8e-25 118.2 110 63.6
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 6.3e-25 117.9 113 61.9
Dinv09756 Davidia involucrata HOM05D000667 ORTHO05D002614 1.8e-24 116.3 96 66.7
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 1.8e-24 116.3 111 63.1
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 3.1e-24 115.5 112 62.5
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 7.0e-24 114.4 113 61.9
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 1.6e-23 113.2 110 61.8
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 2.0e-23 112.8 111 63.1
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 3.5e-23 112.1 113 57.5
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 4.5e-23 111.7 110 60.0
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 4.5e-23 111.7 114 61.4
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 5.9e-23 111.3 111 62.2
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 5.9e-23 111.3 110 59.1
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 5.9e-23 111.3 110 59.1
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 1.0e-22 110.5 110 60.0
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 1.0e-22 110.5 116 57.8
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 1.3e-22 110.2 111 58.6
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 1.7e-22 109.8 102 66.7
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 1.7e-22 109.8 109 57.8
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 1.7e-22 109.8 115 58.3
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 2.9e-22 109.0 110 58.2
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 3.8e-22 108.6 112 60.7
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 8.5e-22 107.5 112 58.0
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 8.5e-22 107.5 111 57.7
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 1.1e-21 107.1 116 59.5
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 2.5e-21 105.9 112 57.1
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 4.2e-21 105.1 110 56.4
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 5.5e-21 104.8 110 56.4
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 9.4e-21 104.0 110 57.3
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 1.2e-20 103.6 109 56.9
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 1.6e-20 103.2 112 56.2
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 2.7e-20 102.4 113 57.5
vmacro13054 Vaccinium macrocarpon HOM05D006258 ORTHO05D007961 2.7e-20 102.4 84 65.5
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 4.7e-20 101.7 113 51.3
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 4.7e-20 101.7 107 55.1
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 1.4e-19 100.1 113 57.5
THA.LOC104804493 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 2.3e-19 99.4 110 54.5
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 2.3e-19 99.4 110 54.5
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 5.2e-19 98.2 110 58.2
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 8.8e-19 97.4 113 55.8
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 2.6e-18 95.9 109 56.0
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 4.4e-18 95.1 110 50.9
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 4.4e-18 95.1 109 55.0
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 4.4e-18 95.1 109 56.0
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 1.7e-17 93.2 110 52.7
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 2.8e-17 92.4 114 52.6
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 6.3e-17 91.3 115 51.3
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 6.3e-17 91.3 113 54.0
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 6.3e-17 91.3 113 54.0
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 1.1e-16 90.5 110 53.6
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 7.0e-16 87.8 113 56.6
Nitab4.5_0008759g0010 Nicotiana tabacum HOM05D005762 ORTHO05D006823 2.0e-15 86.3 81 55.6
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 3.5e-15 85.5 116 46.6
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 3.5e-15 85.5 116 43.1
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 5.9e-15 84.7 113 46.0
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 1.3e-14 83.6 109 52.3
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 5.0e-14 81.6 95 52.6
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 5.0e-14 81.6 126 44.4
Thhalv10026542m.g Eutrema salsugineum HOM05D005762 ORTHO05D006823 8.5e-14 80.9 110 48.2
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 4.2e-13 78.6 110 46.4
AL7G21310 Arabidopsis lyrata HOM05D005762 ORTHO05D006823 5.5e-13 78.2 111 45.9
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 5.5e-13 78.2 110 50.0
CiPaw.15G164900 Carya illinoinensis HOM05D005762 ORTHO05D006823 5.5e-13 78.2 88 56.8
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 1.2e-12 77.0 114 47.4
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 1.6e-12 76.6 111 43.2
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 1.6e-12 76.6 113 46.0
Aa31LG2G19570 Aethionema arabicum HOM05D005762 ORTHO05D006823 1.4e-11 73.6 92 47.8
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 2.6e-10 69.3 109 43.1
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 2.6e-10 69.3 109 43.1
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 3.4e-10 68.9 110 44.5
MD02G1004700 Malus domestica HOM05D005762 ORTHO05D006823 4.4e-10 68.6 54 63.0
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 9.8e-10 67.4 112 43.8
BolC3t21157H Brassica oleracea HOM05D005762 ORTHO05D006823 9.8e-10 67.4 112 43.8
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 2.8e-09 65.9 117 40.2
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 8.3e-09 64.3 45 64.4
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 1.8e-08 63.2 112 38.4
PSO357G0231 Papaver somniferum HOM05D005762 ORTHO05D006823 7.0e-08 61.2 112 41.1
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 9.1e-08 60.8 109 37.6
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 9.1e-08 60.8 109 37.6
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 4.5e-07 58.5 115 39.1
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 3.8e-06 55.5 41 56.1
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 3.8e-06 55.5 41 56.1


User provided reference genes

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