Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa020386 Carpinus fangiana HOM05D005249 ORTHO05D006457 2.1e-94 349.0 173 100.0
Haze_09646 Corylus avellana HOM05D005249 ORTHO05D006457 4.0e-93 344.7 173 98.3
QL08p011891 Quercus lobata HOM05D005249 ORTHO05D006457 4.0e-85 318.2 172 89.0
QL08p012062 Quercus lobata HOM05D005249 ORTHO05D006457 4.0e-85 318.2 172 89.0
CiPaw.11G187100 Carya illinoinensis HOM05D005249 ORTHO05D006457 1.0e-80 303.5 173 85.0
Manes.15G073900 Manihot esculenta HOM05D005249 ORTHO05D006457 4.0e-77 291.6 174 83.3
FvH4_3g22190 Fragaria vesca HOM05D005249 ORTHO05D006457 9.0e-77 290.4 176 82.4
Prupe.4G209000 Prunus persica HOM05D005249 ORTHO05D006457 4.4e-76 288.1 175 82.9
Dinv22281 Davidia involucrata HOM05D005249 ORTHO05D006457 1.9e-74 282.7 180 78.3
Gohir.D01G064800 Gossypium hirsutum HOM05D005249 ORTHO05D006457 9.3e-74 280.4 173 78.6
Gorai.002G085700 Gossypium raimondii HOM05D005249 ORTHO05D006457 9.3e-74 280.4 173 78.6
Thecc.07G044000 Theobroma cacao HOM05D005249 ORTHO05D006457 1.2e-73 280.0 173 76.9
Ciclev10009689m.g Citrus clementina HOM05D005249 ORTHO05D006457 1.6e-73 279.6 174 80.5
RcHm_v2.0_Chr5g0038151 Rosa chinensis HOM05D005249 ORTHO05D006457 1.6e-73 279.6 176 80.7
TAR626G0063 Trochodendron aralioides HOM05D005249 ORTHO05D006457 1.6e-73 279.6 182 78.6
COL.COLO4_09631 Corchorus olitorius HOM05D005249 ORTHO05D006457 2.1e-73 279.3 173 78.6
Manes.03G127000 Manihot esculenta HOM05D005249 ORTHO05D006457 6.0e-73 277.7 174 79.3
Gohir.A01G077300 Gossypium hirsutum HOM05D005249 ORTHO05D006457 7.8e-73 277.3 173 78.0
GSVIVG01002001001 Vitis vinifera HOM05D005249 ORTHO05D006457 7.8e-73 277.3 173 78.0
Duzib213G0461 Durio zibethinus HOM05D005249 ORTHO05D006457 3.0e-72 275.4 173 77.5
Sabra16G0285800 Salix brachista HOM05D005249 ORTHO05D006457 8.7e-72 273.9 173 78.6
MD03G1207700 Malus domestica HOM05D005249 ORTHO05D006457 1.9e-71 272.7 173 78.0
Hma1.2p1_1271F.1_g271820 Hydrangea macrophylla HOM05D005249 ORTHO05D006457 2.5e-71 272.3 179 76.5
Hma1.2p1_1609F.1_g293423 Hydrangea macrophylla HOM05D005249 ORTHO05D006457 2.5e-71 272.3 179 76.5
TAR624G0120 Trochodendron aralioides HOM05D005249 ORTHO05D006457 2.5e-71 272.3 178 78.7
Cpa.g.sc97.36 Carica papaya HOM05D005249 ORTHO05D006457 4.3e-71 271.6 167 79.0
Potri.001G420900 Populus trichocarpa HOM05D005249 ORTHO05D006457 5.6e-71 271.2 173 77.5
TWI38G0945 Tripterygium wilfordii HOM05D005249 ORTHO05D006457 5.6e-71 271.2 173 76.3
Gohir.D05G366500 Gossypium hirsutum HOM05D005249 ORTHO05D006457 7.3e-71 270.8 174 77.0
Lj8A167T50 Lonicera japonica HOM05D005249 ORTHO05D006457 8.1e-70 267.3 180 75.0
Eucgr.F03446 Eucalyptus grandis HOM05D005249 ORTHO05D006457 1.1e-69 266.9 177 76.3
PGR031G1044 Punica granatum HOM05D005249 ORTHO05D006457 1.4e-69 266.5 175 76.6
CSS0021065 Camellia sinensis var. sinensis HOM05D005249 ORTHO05D006457 4.0e-69 265.0 181 74.0
Lalb_Chr15g0080371 Lupinus albus HOM05D005249 ORTHO05D006457 7.6e-68 260.8 176 76.1
CANSAT21G2135 Cannabis sativa HOM05D005249 ORTHO05D006457 6.4e-67 257.7 177 76.8
Aqoxy1G03622 Aquilegia oxysepala HOM05D005249 ORTHO05D006457 1.4e-66 256.5 178 71.9
SGA_v2.0_scaffold258G45797 Striga asiatica HOM05D005249 ORTHO05D006457 3.2e-66 255.4 182 74.2
arahy.Tifrunner.gnm1.ann1.EK5LIC Arachis hypogaea HOM05D005249 ORTHO05D006457 7.1e-66 254.2 185 70.8
arahy.Tifrunner.gnm1.ann1.I048YJ Arachis hypogaea HOM05D005249 ORTHO05D006457 7.1e-66 254.2 182 72.5
Gohir.A04G019300 Gossypium hirsutum HOM05D005249 ORTHO05D006457 3.5e-65 251.9 152 80.3
MBI02_g28338_MAGBIO Magnolia biondii HOM05D005249 ORTHO05D006457 3.5e-65 251.9 178 73.6
Cc05_g13500 Coffea canephora HOM05D005249 ORTHO05D006457 6.0e-65 251.1 188 71.3
Lsat_1_v5_gn_5_5181 Lactuca sativa HOM05D005249 ORTHO05D006457 1.8e-64 249.6 178 72.5
Lj6g0004310 Lotus japonicus HOM05D005249 ORTHO05D006457 1.8e-64 249.6 175 72.6
Gorai.009G425200 Gossypium raimondii HOM05D005249 ORTHO05D006457 2.3e-64 249.2 214 62.1
Peaxi162Scf00387g00046 Petunia axillaris HOM05D005249 ORTHO05D006457 5.1e-64 248.1 175 71.4
VMungo0540G0590 Vigna mungo HOM05D005249 ORTHO05D006457 6.7e-64 247.7 178 72.5
PSO832G4498 Papaver somniferum HOM05D005249 ORTHO05D006457 1.5e-63 246.5 184 68.5
PSO210G5271 Papaver somniferum HOM05D005249 ORTHO05D006457 2.5e-63 245.7 184 70.1
Phvul.006G038600 Phaseolus vulgaris HOM05D005249 ORTHO05D006457 3.3e-63 245.4 174 70.7
Glyma.08G312800 Glycine max HOM05D005249 ORTHO05D006457 4.3e-63 245.0 183 71.0
Glyma.18G102100 Glycine max HOM05D005249 ORTHO05D006457 9.6e-63 243.8 179 72.1
Nn1g07102 Nelumbo nucifera HOM05D005249 ORTHO05D006457 9.6e-63 243.8 180 71.1
Aa31LG10G3330 Aethionema arabicum HOM05D005249 ORTHO05D006457 1.6e-62 243.0 172 69.8
FAN16G3206 Fragaria x ananassa HOM05D005249 ORTHO05D006340 1.6e-62 243.0 286 50.3
A06p02830 Brassica napus HOM05D005249 ORTHO05D006457 2.1e-62 242.7 171 70.8
BraA06t23490Z Brassica rapa HOM05D005249 ORTHO05D006457 2.1e-62 242.7 171 70.8
FAN11G3900 Fragaria x ananassa HOM05D005249 ORTHO05D006340 2.1e-62 242.7 286 50.3
BcaC08g43263 Brassica carinata HOM05D005249 ORTHO05D006457 2.8e-62 242.3 172 70.9
C06p06070 Brassica napus HOM05D005249 ORTHO05D006457 2.8e-62 242.3 172 70.9
BolC6t35720H Brassica oleracea HOM05D005249 ORTHO05D006457 2.8e-62 242.3 172 70.9
Sp1g37640 Schrenkiella parvula HOM05D005249 ORTHO05D006457 1.1e-61 240.4 173 71.1
PGSC0003DMG400014394 Solanum tuberosum HOM05D005249 ORTHO05D006457 1.1e-61 240.4 176 69.3
THA.LOC104798778 Tarenaya hassleriana HOM05D005249 ORTHO05D006457 1.1e-61 240.4 181 68.0
AL8G37450 Arabidopsis lyrata HOM05D005249 ORTHO05D006457 1.4e-61 240.0 171 69.0
ClCG10G005560 Citrullus lanatus HOM05D005249 ORTHO05D006457 2.4e-61 239.2 173 69.9
Migut.M01785 Erythranthe guttata HOM05D005249 ORTHO05D006457 2.4e-61 239.2 146 80.1
MSTRG.15162 Avicennia marina HOM05D005249 ORTHO05D006457 3.1e-61 238.8 180 72.2
Carub.0001s3985 Capsella rubella HOM05D005249 ORTHO05D006457 4.0e-61 238.4 172 69.8
HanXRQChr05g0159111 Helianthus annuus HOM05D005249 ORTHO05D006457 5.3e-61 238.0 173 71.7
Atru.chr2.3277 Acer truncatum HOM05D005249 ORTHO05D006457 1.2e-60 236.9 176 69.3
AT1G50900 Arabidopsis thaliana HOM05D005249 ORTHO05D006457 1.2e-60 236.9 157 74.5
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.2e-60 236.9 157 75.8
A05p19870 Brassica napus HOM05D005249 ORTHO05D006457 1.5e-60 236.5 171 69.6
BolC5t33095H Brassica oleracea HOM05D005249 ORTHO05D006457 1.5e-60 236.5 184 69.6
BraA05t20892Z Brassica rapa HOM05D005249 ORTHO05D006457 1.5e-60 236.5 171 69.6
Solyc10g006370.3 Solanum lycopersicum HOM05D005249 ORTHO05D006457 1.5e-60 236.5 176 68.2
BcaB07g33531 Brassica carinata HOM05D005249 ORTHO05D006457 2.0e-60 236.1 171 69.0
Carub.0003s2051 Capsella rubella HOM05D005249 ORTHO05D006457 2.0e-60 236.1 176 73.3
Nitab4.5_0005048g0030 Nicotiana tabacum HOM05D005249 ORTHO05D006457 2.6e-60 235.7 182 70.9
A05p28310 Brassica napus HOM05D005249 ORTHO05D006457 3.4e-60 235.3 160 75.6
C05p33210 Brassica napus HOM05D005249 ORTHO05D006457 3.4e-60 235.3 161 71.4
BraA05t21713Z Brassica rapa HOM05D005249 ORTHO05D006457 3.4e-60 235.3 160 75.6
Ca_08298_v3 Cicer arietinum L. HOM05D005249 ORTHO05D006457 4.5e-60 235.0 179 71.5
Thhalv10021639m.g Eutrema salsugineum HOM05D005249 ORTHO05D006457 4.5e-60 235.0 178 72.5
Psat5g216840 Pisum sativum HOM05D005249 ORTHO05D006457 5.8e-60 234.6 177 68.4
Medtr3g019320 Medicago truncatula HOM05D005249 ORTHO05D006457 1.0e-59 233.8 181 68.5
AL1G58630 Arabidopsis lyrata HOM05D005249 ORTHO05D006457 1.3e-59 233.4 147 75.5
Sp3g18550 Schrenkiella parvula HOM05D005249 ORTHO05D006457 1.3e-59 233.4 157 76.4
Actinidia09913 Actinidia chinensis HOM05D005249 ORTHO05D006457 1.7e-59 233.0 181 69.6
ECA246G1486 Erigeron canadensis HOM05D005249 ORTHO05D006457 2.2e-59 232.6 157 74.5
C05p43800 Brassica napus HOM05D005249 ORTHO05D006457 4.9e-59 231.5 183 68.9
MELO3C025397.2 Cucumis melo HOM05D005249 ORTHO05D006457 4.9e-59 231.5 173 67.6
CsaV3_3G005280 Cucumis sativus L. HOM05D005249 ORTHO05D006457 6.5e-59 231.1 173 67.1
Dinv40734 Davidia involucrata HOM05D005249 ORTHO05D006457 6.5e-59 231.1 149 76.5
Thhalv10011819m.g Eutrema salsugineum HOM05D005249 ORTHO05D006457 8.4e-59 230.7 162 70.4
unitig_578.g16003 Utricularia gibba HOM05D005249 ORTHO05D006457 1.1e-58 230.3 161 71.4
Actinidia05108 Actinidia chinensis HOM05D005249 ORTHO05D006457 3.2e-58 228.8 181 68.0
Sc16g0006280 Simmondsia chinensis HOM05D005249 ORTHO05D006457 5.5e-58 228.0 183 68.9
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 7.1e-58 227.6 131 83.2
Oeu062605.1 Olea europaea HOM05D005249 ORTHO05D006457 1.6e-57 226.5 180 66.7
AUR62015702 Chenopodium quinoa HOM05D005249 ORTHO05D006457 3.5e-57 225.3 179 67.0
AUR62020502 Chenopodium quinoa HOM05D005249 ORTHO05D006457 4.6e-57 224.9 179 67.0
ATR0752G229 Amborella trichopoda HOM05D005249 ORTHO05D006457 7.9e-57 224.2 172 66.3
Sed0007548 Sechium edule HOM05D005249 ORTHO05D006457 2.3e-56 222.6 180 67.2
HPP92_017607 Vanilla planifolia HOM05D005249 ORTHO05D006457 3.0e-56 222.2 180 67.8
Rhsim04G0001800 Rhododendron simsii HOM05D005249 ORTHO05D006457 8.7e-56 220.7 189 65.6
CDE05G2685 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.5e-55 219.9 125 84.0
CAN.G1781.9 Capsicum annuum HOM05D005249 ORTHO05D006457 4.3e-55 218.4 182 63.7
Sopen10g002320 Solanum pennellii HOM05D005249 ORTHO05D006457 5.7e-55 218.0 137 75.9
Ah.06g182920 Amaranthus hybridus HOM05D005249 ORTHO05D006457 2.8e-54 215.7 179 64.8
CDE05G0273 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 2.8e-54 215.7 177 63.3
BcaB02g11192 Brassica carinata HOM05D005249 ORTHO05D006457 3.4e-52 208.8 166 66.3
Zm00001eb322850 Zea mays HOM05D005249 ORTHO05D006457 5.8e-52 208.0 190 62.1
EL10Ac4g07899 Beta vulgaris HOM05D005249 ORTHO05D006457 1.0e-51 207.2 177 63.8
BcaB07g33530 Brassica carinata HOM05D005249 ORTHO05D006457 3.2e-50 202.2 145 69.7
CDE11G0574 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.3e-48 196.8 158 62.7
Os07g0520800 Oryza sativa ssp. japonica HOM05D005249 ORTHO05D006457 1.3e-48 196.8 143 72.0
SMO137G0373 Selaginella moellendorffii HOM05D005249 ORTHO05D006457 5.1e-48 194.9 140 67.9
vmacro09735 Vaccinium macrocarpon HOM05D005249 ORTHO05D006457 2.8e-46 189.1 214 55.1
Nitab4.5_0001393g0170 Nicotiana tabacum HOM05D005249 ORTHO05D006457 1.4e-45 186.8 182 61.0
SEGI_08050 Sequoiadendron giganteum HOM05D005249 ORTHO05D006457 1.7e-43 179.9 153 62.7
CBR_g12744 Chara braunii HOM05D005249 ORTHO05D006457 3.2e-42 175.6 125 68.8
Mapoly0006s0110 Marchantia polymorpha HOM05D005249 ORTHO05D006457 4.3e-39 165.2 129 64.3
Cfa020388 Carpinus fangiana HOM05D005249 ORTHO05D006457 1.1e-37 160.6 82 100.0
Pp3c5_16520 Physcomitrium patens HOM05D005249 ORTHO05D006457 1.4e-37 160.2 120 62.5
BcaB06g26188 Brassica carinata HOM05D005249 ORTHO05D006457 1.9e-34 149.8 157 54.8
Rhsim04G0000700 Rhododendron simsii HOM05D005249 ORTHO05D006457 2.5e-34 149.4 87 83.9
FAN21G3293 Fragaria x ananassa HOM05D005249 ORTHO05D006457 3.2e-34 149.1 82 90.2
CARHR096310 Cardamine hirsuta HOM05D005249 ORTHO05D006457 6.1e-33 144.8 87 81.6
CARHR040950 Cardamine hirsuta HOM05D005249 ORTHO05D006457 5.7e-31 138.3 87 74.7
Cre12.g551950 Chlamydomonas reinhardtii HOM05D005249 ORTHO05D006457 7.4e-31 137.9 105 57.1
PRCOL_00000858 Prasinoderma coloniale HOM05D005249 ORTHO05D006457 2.2e-27 126.3 97 59.8
TPR.G3850 Trifolium pratense HOM05D005249 ORTHO05D006457 2.9e-27 125.9 82 76.8
Glyma.09G102000 Glycine max HOM05D005249 ORTHO05D006457 4.2e-26 122.1 87 72.4
MCO16G329 Micromonas commoda HOM05D005249 ORTHO05D006457 2.0e-23 113.2 103 52.4
CARHR040940 Cardamine hirsuta HOM05D005249 ORTHO05D006457 4.8e-22 108.6 86 65.1
Nn1g07101 Nelumbo nucifera HOM05D005249 ORTHO05D006457 8.2e-22 107.8 91 60.4
BcaC05g27384 Brassica carinata HOM05D005249 ORTHO05D006457 7.7e-20 101.3 75 65.3
CARHR096330 Cardamine hirsuta HOM05D005249 ORTHO05D006457 5.0e-19 98.6 83 62.7
Atru.chr2.3276 Acer truncatum HOM05D005249 ORTHO05D006457 1.2e-17 94.0 54 81.5
FAN11G2388 Fragaria x ananassa HOM05D000371 ORTHO05D006340 1.7e-14 83.6 93 53.8
BcaC05g27382 Brassica carinata HOM05D005249 ORTHO05D006457 2.2e-14 83.2 54 74.1
FvH4_3g22200 Fragaria vesca HOM05D000371 ORTHO05D006340 8.3e-14 81.3 93 53.8
FAN16G2982 Fragaria x ananassa HOM05D000371 ORTHO05D006340 7.0e-13 78.2 93 52.7
RcHm_v2.0_Chr5g0038161 Rosa chinensis HOM05D000371 ORTHO05D006340 1.6e-12 77.0 91 52.7
Hund02097 Selenicereus undatus HOM05D000420 ORTHO05D000110 5.5e-10 68.6 86 50.0
CBR_g602 Chara braunii HOM05D005249 ORTHO05D006457 1.2e-09 67.4 69 40.6
Pp3c6_9300 Physcomitrium patens HOM05D005249 ORTHO05D006457 3.7e-06 55.8 66 39.4
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 8.3e-06 54.7 38 71.1


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