Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa019933 Carpinus fangiana HOM05D006918 ORTHO05D008525 1.4e-91 339.7 189 100.0
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 4.6e-50 201.8 214 52.3
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 1.2e-47 193.7 211 51.7
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 1.1e-46 190.7 211 50.7
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 1.2e-45 187.2 212 49.1
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 3.4e-45 185.7 211 49.8
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 5.8e-45 184.9 211 49.3
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 4.2e-43 178.7 208 48.6
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 4.6e-42 175.3 208 48.1
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 3.0e-41 172.6 209 46.9
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 8.7e-41 171.0 209 46.4
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 4.9e-36 155.2 211 47.4
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 4.2e-35 152.1 210 43.8
BcaC08g47471 Brassica carinata HOM05D006918 ORTHO05D008525 1.8e-30 136.7 182 43.4
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 1.2e-29 134.0 99 65.7
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 3.4e-29 132.5 83 75.9
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 4.5e-29 132.1 128 54.7
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 4.5e-29 132.1 128 54.7
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 1.0e-25 120.9 84 69.0
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 6.7e-25 118.2 161 44.1
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 2.5e-24 116.3 80 72.5
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 9.6e-24 114.4 84 64.3
SalBow8G1439 Salvia bowleyana HOM05D006918 ORTHO05D008525 2.8e-23 112.8 80 66.2
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 3.7e-23 112.5 84 63.1
FAN16G1729 Fragaria x ananassa HOM05D006918 ORTHO05D008525 4.8e-23 112.1 70 77.1
CDE12G0330 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 4.0e-22 109.0 67 71.6
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 2.5e-19 99.8 90 54.4
Lj5C202T3 Lonicera japonica HOM05D006918 ORTHO05D008525 7.1e-19 98.2 195 33.3
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 1.6e-18 97.1 161 50.3
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 3.5e-18 95.9 63 71.4
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 3.0e-17 92.8 60 70.0
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 8.7e-17 91.3 115 46.1
Cfa019931 Carpinus fangiana HOM05D006918 ORTHO05D008525 1.5e-16 90.5 64 67.2
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 1.9e-16 90.1 55 74.5
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 2.8e-15 86.3 52 75.0
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 8.2e-15 84.7 88 51.1
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 1.4e-14 84.0 84 50.0
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 1.5e-13 80.5 52 73.1
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 1.5e-13 80.5 52 71.2
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 2.6e-13 79.7 52 69.2
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 4.5e-13 79.0 50 72.0
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 5.8e-13 78.6 53 73.6
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 5.8e-13 78.6 50 68.0
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 5.8e-13 78.6 50 68.0
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 7.6e-13 78.2 164 36.0
Cfa019930 Carpinus fangiana HOM05D006918 ORTHO05D008525 1.3e-12 77.4 72 56.9
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 1.3e-12 77.4 49 71.4
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 2.9e-12 76.3 38 94.7
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 2.9e-12 76.3 47 72.3
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 3.8e-12 75.9 48 70.8
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 4.9e-12 75.5 52 67.3
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 4.9e-12 75.5 83 49.4
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 4.9e-12 75.5 102 41.2
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 6.5e-12 75.1 50 72.0
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 8.4e-12 74.7 50 66.0
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 1.4e-11 73.9 38 92.1
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 5.5e-11 72.0 50 62.0
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 7.1e-11 71.6 163 36.8
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 1.6e-10 70.5 163 36.2
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 7.9e-10 68.2 45 62.2
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 6.7e-09 65.1 41 73.2
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 6.7e-09 65.1 35 88.6
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 1.9e-08 63.5 35 80.0
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 2.5e-08 63.2 37 78.4
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 3.3e-08 62.8 37 81.1
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 3.3e-08 62.8 36 80.6
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 7.4e-08 61.6 35 82.9
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 7.4e-08 61.6 35 82.9
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 7.4e-08 61.6 52 59.6
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 9.7e-08 61.2 37 75.7
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 1.6e-07 60.5 37 75.7
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 2.2e-07 60.1 34 79.4
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 6.3e-07 58.5 37 70.3
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 1.4e-06 57.4 39 66.7
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 1.4e-06 57.4 35 77.1
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 1.8e-06 57.0 37 70.3
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 1.8e-06 57.0 36 75.0
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 2.4e-06 56.6 34 76.5
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 2.4e-06 56.6 35 71.4
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 3.1e-06 56.2 37 70.3
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 9.0e-06 54.7 34 70.6


User provided reference genes

Program Settings