Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa019931 Carpinus fangiana HOM05D006918 ORTHO05D008525 5.7e-32 140.2 66 100.0
Cfa019933 Carpinus fangiana HOM05D006918 ORTHO05D008525 2.3e-17 91.7 64 67.2
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 5.2e-17 90.5 59 67.8
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 3.7e-15 84.3 59 64.4
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 8.3e-15 83.2 59 62.7
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 1.4e-14 82.4 59 62.7
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 3.1e-14 81.3 59 64.4
SalBow8G1439 Salvia bowleyana HOM05D006918 ORTHO05D008525 3.1e-14 81.3 59 61.0
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 2.0e-13 78.6 59 62.7
FAN16G1729 Fragaria x ananassa HOM05D006918 ORTHO05D008525 3.5e-13 77.8 59 62.7
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 8.6e-12 73.2 50 68.0
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 8.6e-12 73.2 51 68.6
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 8.6e-12 73.2 53 60.4
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 1.5e-11 72.4 51 68.6
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 1.9e-11 72.0 51 68.6
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 2.5e-11 71.6 51 68.6
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 2.5e-11 71.6 50 68.0
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 2.5e-11 71.6 49 67.3
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 5.6e-11 70.5 51 66.7
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 5.6e-11 70.5 49 69.4
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 5.6e-11 70.5 49 69.4
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 5.6e-11 70.5 49 67.3
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 7.3e-11 70.1 50 68.0
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 1.2e-10 69.3 59 57.6
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 5.2e-09 63.9 59 50.8
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 8.9e-09 63.2 40 70.0


User provided reference genes

Program Settings