Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa018754 Carpinus fangiana HOM05D004371 ORTHO05D002186 1.9e-92 342.4 164 100.0
Cfa020705 Carpinus fangiana HOM05D004371 ORTHO05D002186 9.3e-92 340.1 164 99.4
Cfa018041 Carpinus fangiana HOM05D004371 ORTHO05D002186 2.4e-15 86.3 41 95.1
Haze_18084 Corylus avellana HOM05D004371 ORTHO05D002186 2.4e-15 86.3 41 95.1
Lj4C65T11 Lonicera japonica HOM05D004371 ORTHO05D002186 6.9e-10 68.2 47 72.3
Potri.002G122300 Populus trichocarpa HOM05D004371 ORTHO05D002186 1.2e-09 67.4 47 63.8
Potri.014G022100 Populus trichocarpa HOM05D004371 ORTHO05D002186 1.2e-09 67.4 47 68.1
PGR083G0083 Punica granatum HOM05D004371 ORTHO05D002186 1.2e-09 67.4 47 68.1
Sabra14G0014700 Salix brachista HOM05D004371 ORTHO05D002186 1.5e-09 67.0 47 68.1
CiPaw.15G050400 Carya illinoinensis HOM05D004371 ORTHO05D002186 5.8e-09 65.1 43 69.8
QL02p003441 Quercus lobata HOM05D004371 ORTHO05D002186 5.8e-09 65.1 38 78.9
Actinidia38086 Actinidia chinensis HOM05D004371 ORTHO05D002186 9.9e-09 64.3 44 68.2
Duzib093G1937 Durio zibethinus HOM05D004371 ORTHO05D002186 9.9e-09 64.3 50 70.0
Medtr3g102470 Medicago truncatula HOM05D004371 ORTHO05D002186 9.9e-09 64.3 46 67.4
Cpa.g.sc21.140 Carica papaya HOM05D004371 ORTHO05D002186 1.3e-08 63.9 39 76.9
Rhsim07G0223800 Rhododendron simsii HOM05D004371 ORTHO05D002186 1.7e-08 63.5 45 66.7
vmacro04572 Vaccinium macrocarpon HOM05D004371 ORTHO05D002186 1.7e-08 63.5 52 69.2
Gohir.A06G022200 Gossypium hirsutum HOM05D004371 ORTHO05D002186 2.2e-08 63.2 45 66.7
Gohir.D06G019600 Gossypium hirsutum HOM05D004371 ORTHO05D002186 2.2e-08 63.2 45 66.7
Gorai.010G023800 Gossypium raimondii HOM05D004371 ORTHO05D002186 2.2e-08 63.2 45 66.7
Prupe.1G429300 Prunus persica HOM05D004371 ORTHO05D002186 2.2e-08 63.2 38 76.3
VMungo1383G3095 Vigna mungo HOM05D004371 ORTHO05D002186 2.9e-08 62.8 46 65.2
Ca_15926_v3 Cicer arietinum L. HOM05D004371 ORTHO05D002186 3.8e-08 62.4 46 65.2
ClCG05G020280 Citrullus lanatus HOM05D004371 ORTHO05D002186 3.8e-08 62.4 39 74.4
COL.COLO4_03644 Corchorus olitorius HOM05D004371 ORTHO05D002186 3.8e-08 62.4 43 67.4
MELO3C016791.2 Cucumis melo HOM05D004371 ORTHO05D002186 3.8e-08 62.4 39 74.4
CsaV3_4G034760 Cucumis sativus L. HOM05D004371 ORTHO05D002186 3.8e-08 62.4 39 74.4
Thecc.08G095700 Theobroma cacao HOM05D004371 ORTHO05D002186 3.8e-08 62.4 43 67.4
Manes.05G178400 Manihot esculenta HOM05D004371 ORTHO05D002186 4.9e-08 62.0 42 73.8
ATR0205G008 Amborella trichopoda HOM05D004371 ORTHO05D002186 6.4e-08 61.6 45 68.9
Gohir.D05G264800 Gossypium hirsutum HOM05D004371 ORTHO05D002186 6.4e-08 61.6 39 71.8
Gorai.009G276600 Gossypium raimondii HOM05D004371 ORTHO05D002186 6.4e-08 61.6 39 71.8
THA.LOC104825757 Tarenaya hassleriana HOM05D004371 ORTHO05D002186 6.4e-08 61.6 43 69.8
FAN20G0811 Fragaria x ananassa HOM05D004371 ORTHO05D002186 8.4e-08 61.2 43 65.1
MD08G1091700 Malus domestica HOM05D004371 ORTHO05D002186 8.4e-08 61.2 45 64.4
CiPaw.16G035500 Carya illinoinensis HOM05D004371 ORTHO05D002186 1.1e-07 60.8 43 69.8
Duzib116G0411 Durio zibethinus HOM05D004371 ORTHO05D002186 1.1e-07 60.8 43 65.1
FvH4_2g33690 Fragaria vesca HOM05D004371 ORTHO05D002186 1.1e-07 60.8 41 68.3
FAN24G0693 Fragaria x ananassa HOM05D004371 ORTHO05D002186 1.1e-07 60.8 41 68.3
Glyma.17G237800 Glycine max HOM05D004371 ORTHO05D002186 1.1e-07 60.8 46 63.0
Lsat_1_v5_gn_4_129880 Lactuca sativa HOM05D004371 ORTHO05D002186 1.1e-07 60.8 39 71.8
HanXRQChr09g0267301 Helianthus annuus HOM05D004371 ORTHO05D002186 1.4e-07 60.5 38 73.7
RcHm_v2.0_Chr6g0308861 Rosa chinensis HOM05D004371 ORTHO05D002186 1.9e-07 60.1 43 65.1
TAR381G0906 Trochodendron aralioides HOM05D004371 ORTHO05D002186 1.9e-07 60.1 50 62.0
CSS0047169 Camellia sinensis var. sinensis HOM05D004371 ORTHO05D002186 2.4e-07 59.7 39 71.8
Cfa004067 Carpinus fangiana HOM05D004371 ORTHO05D002186 2.4e-07 59.7 50 58.0
Haze_15343 Corylus avellana HOM05D004371 ORTHO05D002186 2.4e-07 59.7 50 58.0
FAN27G3108 Fragaria x ananassa HOM05D004371 ORTHO05D002186 2.4e-07 59.7 39 69.2
Psat5g040440 Pisum sativum HOM05D004371 ORTHO05D002186 2.4e-07 59.7 38 73.7
TPR.G25607 Trifolium pratense HOM05D004371 ORTHO05D002186 2.4e-07 59.7 38 73.7
CANSAT01G0966 Cannabis sativa HOM05D004371 ORTHO05D002186 3.2e-07 59.3 38 73.7
Hma1.2p1_0240F.1_g100160 Hydrangea macrophylla HOM05D004371 ORTHO05D002186 4.2e-07 58.9 38 71.1
VMungo1309G1530 Vigna mungo HOM05D004371 ORTHO05D002186 4.2e-07 58.9 40 70.0
CDE04G3464 Ceratophyllum demersum HOM05D004371 ORTHO05D002186 5.4e-07 58.5 43 69.8
ECA246G0242 Erigeron canadensis HOM05D004371 ORTHO05D002186 5.4e-07 58.5 52 53.8
Lsat_1_v5_gn_6_109301 Lactuca sativa HOM05D004371 ORTHO05D002186 5.4e-07 58.5 39 66.7
TWI09G1286 Tripterygium wilfordii HOM05D004371 ORTHO05D002186 5.4e-07 58.5 45 66.7
DCAR_012798 Daucus carota HOM05D004371 ORTHO05D002186 7.1e-07 58.2 46 60.9
FAN15G2080 Fragaria x ananassa HOM05D004371 ORTHO05D002186 7.1e-07 58.2 39 66.7
Phvul.009G068500 Phaseolus vulgaris HOM05D004371 ORTHO05D002186 7.1e-07 58.2 38 71.1
Sed0008652 Sechium edule HOM05D004371 ORTHO05D002186 7.1e-07 58.2 44 63.6
Dinv26873 Davidia involucrata HOM05D004371 ORTHO05D002186 9.3e-07 57.8 47 61.7
Gohir.A05G262600 Gossypium hirsutum HOM05D004371 ORTHO05D002186 9.3e-07 57.8 39 66.7
AL7G29060 Arabidopsis lyrata HOM05D004371 ORTHO05D002186 1.2e-06 57.4 36 72.2
AT4G24210 Arabidopsis thaliana HOM05D004371 ORTHO05D002186 1.2e-06 57.4 36 72.2
Duzib041G0027 Durio zibethinus HOM05D004371 ORTHO05D002186 1.2e-06 57.4 43 65.1
Eucgr.F00160 Eucalyptus grandis HOM05D004371 ORTHO05D002186 1.2e-06 57.4 44 65.9
Glyma.04G042900 Glycine max HOM05D004371 ORTHO05D002186 1.2e-06 57.4 40 67.5
HPP92_004762 Vanilla planifolia HOM05D004371 ORTHO05D002186 1.2e-06 57.4 39 66.7
HPP92_027899 Vanilla planifolia HOM05D004371 ORTHO05D002186 1.2e-06 57.4 39 66.7
Aa31LG7G10250 Aethionema arabicum HOM05D004371 ORTHO05D002186 1.6e-06 57.0 36 72.2
BcaNung01127 Brassica carinata HOM05D004371 ORTHO05D002186 1.6e-06 57.0 40 65.0
CARHR231630 Cardamine hirsuta HOM05D004371 ORTHO05D002186 1.6e-06 57.0 36 72.2
Thhalv10026481m.g Eutrema salsugineum HOM05D004371 ORTHO05D002186 1.6e-06 57.0 36 72.2
PSO170G2383 Papaver somniferum HOM05D004371 ORTHO05D002186 1.6e-06 57.0 48 62.5
BcaC09g50896 Brassica carinata HOM05D004371 ORTHO05D002186 2.1e-06 56.6 40 65.0
A01p15540 Brassica napus HOM05D004371 ORTHO05D002186 2.1e-06 56.6 40 65.0
C01p19460 Brassica napus HOM05D004371 ORTHO05D002186 2.1e-06 56.6 40 65.0
BolC1t01875H Brassica oleracea HOM05D004371 ORTHO05D002186 2.1e-06 56.6 40 65.0
Glyma.06G043400 Glycine max HOM05D004371 ORTHO05D002186 2.1e-06 56.6 36 72.2
HanXRQChr02g0038061 Helianthus annuus HOM05D004371 ORTHO05D002186 2.1e-06 56.6 38 68.4
Lsat_1_v5_gn_1_23100 Lactuca sativa HOM05D004371 ORTHO05D002186 2.1e-06 56.6 39 69.2
Nn5g31361 Nelumbo nucifera HOM05D004371 ORTHO05D002186 2.1e-06 56.6 53 60.4
Nn5g31362 Nelumbo nucifera HOM05D004371 ORTHO05D002186 2.1e-06 56.6 53 60.4
Nn5g31363 Nelumbo nucifera HOM05D004371 ORTHO05D002186 2.1e-06 56.6 53 60.4
TWI56G0459 Tripterygium wilfordii HOM05D004371 ORTHO05D002186 2.1e-06 56.6 42 69.0
Dinv35916 Davidia involucrata HOM05D004371 ORTHO05D002186 2.7e-06 56.2 47 63.8
MD15G1075800 Malus domestica HOM05D004371 ORTHO05D002186 2.7e-06 56.2 40 67.5
Sed0011342 Sechium edule HOM05D004371 ORTHO05D002186 2.7e-06 56.2 39 69.2
BraA01t01493Z Brassica rapa HOM05D004371 ORTHO05D002186 3.5e-06 55.8 40 65.0
CDE07G1639 Ceratophyllum demersum HOM05D004371 ORTHO05D002186 3.5e-06 55.8 44 63.6
Carub.0007s1686 Capsella rubella HOM05D004371 ORTHO05D002186 4.6e-06 55.5 36 69.4
Sp7g22190 Schrenkiella parvula HOM05D004371 ORTHO05D002186 4.6e-06 55.5 36 69.4
Lalb_Chr11g0062751 Lupinus albus HOM05D004371 ORTHO05D002186 6.0e-06 55.1 40 62.5


User provided reference genes

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