Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 5.5e-245 850.5 426 100.0
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 9.2e-216 753.4 425 87.8
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 2.3e-211 738.8 426 86.6
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.4e-203 713.0 421 83.4
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 6.8e-203 710.7 429 82.5
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.7e-201 706.1 431 80.7
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 1.4e-200 703.0 429 81.1
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 4.1e-200 701.4 424 80.9
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 2.7e-199 698.7 428 80.4
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 3.5e-199 698.4 419 81.1
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 1.1e-197 693.3 428 79.4
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 1.9e-197 692.6 421 80.8
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 2.8e-196 688.7 421 80.8
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 3.6e-196 688.3 429 79.0
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 1.1e-195 686.8 419 79.5
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 6.9e-195 684.1 431 78.0
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 9.0e-195 683.7 459 73.9
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 2.0e-194 682.6 419 80.2
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 4.4e-194 681.4 430 78.8
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 7.6e-194 680.6 419 79.7
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 7.6e-194 680.6 428 77.3
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 9.9e-194 680.2 419 79.7
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 2.9e-193 678.7 428 77.1
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 1.4e-192 676.4 427 79.2
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 1.9e-192 676.0 428 76.6
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 3.2e-192 675.2 430 77.0
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 7.1e-192 674.1 430 76.7
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 3.5e-191 671.8 430 77.0
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 3.5e-191 671.8 429 76.9
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 1.0e-190 670.2 426 78.2
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 1.5e-189 666.4 427 78.0
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 1.9e-189 666.0 427 77.0
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 1.9e-189 666.0 427 77.0
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 3.6e-188 661.8 427 77.8
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 1.8e-187 659.4 434 76.5
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 2.4e-187 659.1 427 76.1
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 4.0e-187 658.3 437 76.0
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 2.0e-186 656.0 413 78.2
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 2.0e-186 656.0 419 76.1
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 2.0e-186 656.0 427 76.3
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 1.3e-185 653.3 423 76.6
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 1.3e-185 653.3 423 76.6
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 2.9e-185 652.1 431 74.7
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 1.1e-184 650.2 426 74.4
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 5.4e-184 647.9 430 73.0
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 2.1e-183 646.0 419 75.4
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 6.0e-183 644.4 419 74.5
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 1.3e-182 643.3 335 96.7
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 6.7e-182 641.0 419 73.7
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 3.3e-181 638.6 419 74.5
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 4.3e-181 638.3 420 74.3
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 5.6e-181 637.9 424 73.8
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 1.6e-180 636.3 421 76.2
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 1.8e-179 632.9 420 73.6
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 2.0e-178 629.4 423 72.1
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 2.6e-178 629.0 430 71.4
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 5.8e-178 627.9 421 75.5
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 5.8e-178 627.9 430 71.4
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 5.8e-178 627.9 423 72.1
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 1.7e-177 626.3 421 74.3
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 3.8e-177 625.2 428 74.1
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 4.9e-177 624.8 419 74.2
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 8.4e-177 624.0 420 72.6
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 1.1e-176 623.6 421 74.8
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 1.1e-176 623.6 419 71.8
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 3.2e-176 622.1 421 74.3
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 3.2e-176 622.1 421 74.3
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 5.5e-176 621.3 421 74.3
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 7.1e-176 620.9 421 74.3
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 7.1e-176 620.9 421 74.3
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 1.6e-175 619.8 423 73.5
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 3.5e-175 618.6 421 74.3
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 3.5e-175 618.6 421 72.9
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 4.6e-175 618.2 424 71.7
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 4.6e-175 618.2 424 71.7
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 3.0e-174 615.5 443 68.8
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 3.0e-174 615.5 420 71.2
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 5.1e-174 614.8 420 71.2
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 5.1e-174 614.8 420 71.0
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 6.7e-174 614.4 434 69.6
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 1.1e-173 613.6 448 69.2
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 1.1e-173 613.6 420 71.0
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.9e-173 612.8 423 72.6
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 3.3e-173 612.1 423 72.3
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 5.6e-173 611.3 529 62.6
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.6e-172 609.8 423 72.1
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 6.2e-172 607.8 434 69.1
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 5.3e-171 604.7 467 64.5
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 2.9e-169 599.0 419 69.2
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 8.4e-169 597.4 420 70.5
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 1.4e-168 596.7 419 70.9
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 1.4e-168 596.7 420 69.5
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 2.5e-168 595.9 419 67.8
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 2.7e-167 592.4 419 68.7
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 4.6e-167 591.7 416 72.1
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 1.6e-164 583.2 419 67.3
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 5.3e-163 578.2 419 67.5
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 4.2e-160 568.5 423 65.0
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 7.2e-160 567.8 420 67.4
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 9.1e-155 550.8 423 63.6
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 9.1e-155 550.8 423 62.4
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.2e-154 550.4 417 66.4
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 1.9e-144 516.5 427 58.3
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 1.8e-142 510.0 429 58.5
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 7.4e-141 504.6 423 61.7
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 3.7e-140 502.3 356 69.1
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 2.0e-138 496.5 432 55.3
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 9.4e-136 487.6 420 61.9
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 3.6e-135 485.7 423 55.8
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 1.9e-128 463.4 434 58.3
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 2.5e-128 463.0 287 77.0
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 1.2e-127 460.7 351 67.2
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 7.5e-125 451.4 275 80.0
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 1.6e-122 443.7 425 51.1
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 1.5e-117 427.2 254 81.9
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 1.3e-116 424.1 420 55.2
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 7.1e-91 338.6 194 84.0
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 8.6e-89 331.6 426 43.9
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 2.5e-80 303.5 234 61.1
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 9.6e-72 275.0 292 53.1
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 1.9e-64 250.8 184 70.1
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 5.5e-51 206.1 138 76.1
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 1.6e-34 151.4 93 73.1
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 5.7e-32 142.9 89 71.9
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 5.3e-30 136.3 89 71.9
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 4.7e-26 123.2 88 64.8
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 4.1e-14 83.6 355 23.9
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 4.5e-13 80.1 90 48.9
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 5.2e-09 66.6 41 70.7


User provided reference genes

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