Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa016387 Carpinus fangiana HOM05D008085 ORTHO05D010173 4.1e-40 167.5 80 100.0
Cfa016390 Carpinus fangiana HOM05D008085 ORTHO05D010173 3.1e-32 141.4 73 93.2
Haze_00163 Corylus avellana HOM05D008085 ORTHO05D010173 1.9e-29 132.1 97 72.2
Haze_00158 Corylus avellana HOM05D008085 ORTHO05D010173 3.2e-29 131.3 73 86.3
Haze_00157 Corylus avellana HOM05D008085 ORTHO05D010173 7.9e-28 126.7 73 83.6
QL09p010254 Quercus lobata HOM05D008085 ORTHO05D010173 6.3e-17 90.5 77 62.3
GSVIVG01028701001 Vitis vinifera HOM05D008085 ORTHO05D010173 4.7e-12 74.3 74 55.4
Cpa.g.sc3.61 Carica papaya HOM05D008085 ORTHO05D010173 2.0e-10 68.9 69 58.0
Actinidia08634 Actinidia chinensis HOM05D008085 ORTHO05D010173 4.4e-10 67.8 68 55.9
Nn3g19023 Nelumbo nucifera HOM05D008085 ORTHO05D010173 1.1e-08 63.2 58 53.4
Ciclev10004407m.g Citrus clementina HOM05D008085 ORTHO05D010173 1.8e-08 62.4 69 52.2
Dinv05478 Davidia involucrata HOM05D008085 ORTHO05D010173 4.1e-08 61.2 63 52.4
Potri.012G002500 Populus trichocarpa HOM05D008085 ORTHO05D010173 4.1e-08 61.2 64 46.9
Dinv35318 Davidia involucrata HOM05D008085 ORTHO05D010173 5.3e-08 60.8 80 48.8
Duzib205G2065 Durio zibethinus HOM05D008085 ORTHO05D010173 9.1e-08 60.1 76 47.4
Manes.14G007380 Manihot esculenta HOM05D008085 ORTHO05D010173 9.1e-08 60.1 79 44.3
Lsat_1_v5_gn_2_135900 Lactuca sativa HOM05D008085 ORTHO05D010173 2.0e-07 58.9 65 49.2
Aqoxy5G04211 Aquilegia oxysepala HOM05D008085 ORTHO05D010173 2.7e-07 58.5 63 52.4
CSS0005334 Camellia sinensis var. sinensis HOM05D008085 ORTHO05D010173 3.5e-07 58.2 68 52.9
CSS0016250 Camellia sinensis var. sinensis HOM05D008085 ORTHO05D010173 3.5e-07 58.2 68 52.9
TWI23G0877 Tripterygium wilfordii HOM05D008085 ORTHO05D010173 5.9e-07 57.4 67 50.7
Gohir.D08G107600 Gossypium hirsutum HOM05D008085 ORTHO05D010173 7.7e-07 57.0 63 52.4
Gorai.004G115200 Gossypium raimondii HOM05D008085 ORTHO05D010173 7.7e-07 57.0 63 52.4
SGA_v2.0_scaffold44G16781 Striga asiatica HOM05D001322 ORTHO05D010173 7.7e-07 57.0 65 44.6
SalBow4G2621 Salvia bowleyana HOM05D008085 ORTHO05D010173 1.0e-06 56.6 71 43.7
SalBow4G3049 Salvia bowleyana HOM05D008085 ORTHO05D010173 1.0e-06 56.6 71 43.7
ECA238G3695 Erigeron canadensis HOM05D008085 ORTHO05D010173 1.3e-06 56.2 64 48.4
PGR142G3951 Punica granatum HOM05D008085 ORTHO05D010173 2.2e-06 55.5 66 54.5
Atru.chr13.230 Acer truncatum HOM05D008085 ORTHO05D010173 2.9e-06 55.1 38 73.7
Gohir.A08G096300 Gossypium hirsutum HOM05D008085 ORTHO05D010173 2.9e-06 55.1 63 52.4
Thecc.03G194500 Theobroma cacao HOM05D008085 ORTHO05D010173 5.0e-06 54.3 52 53.8


User provided reference genes

Program Settings