Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 5.1e-188 661.0 349 100.0
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 1.3e-170 603.2 351 92.0
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 2.1e-157 559.3 347 85.9
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 8.8e-156 553.9 345 85.5
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 1.7e-138 496.5 345 77.1
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 2.8e-138 495.7 321 79.4
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 1.4e-137 493.4 321 79.8
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 8.5e-135 484.2 345 75.1
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 5.5e-134 481.5 343 75.5
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 1.6e-133 479.9 345 73.6
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 3.6e-133 478.8 328 76.2
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 4.7e-133 478.4 328 76.2
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 6.1e-133 478.0 324 76.9
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 1.0e-132 477.2 345 74.8
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 2.3e-132 476.1 328 75.3
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.0e-132 475.7 328 75.9
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 4.0e-132 475.3 328 76.5
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 4.0e-132 475.3 345 76.5
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 5.2e-132 474.9 328 75.3
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 2.6e-131 472.6 346 74.3
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 4.4e-131 471.9 328 75.0
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 4.4e-131 471.9 332 75.6
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 5.7e-131 471.5 334 74.3
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 2.8e-130 469.2 336 73.8
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 6.3e-130 468.0 329 74.5
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 6.3e-130 468.0 325 72.0
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 1.1e-129 467.2 343 72.3
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 1.1e-129 467.2 337 73.6
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 5.4e-129 464.9 336 72.0
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 1.0e-127 460.7 317 74.8
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 1.3e-127 460.3 326 73.6
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 2.2e-127 459.5 323 75.5
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 6.5e-127 458.0 319 71.8
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 6.5e-127 458.0 319 71.8
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 1.1e-126 457.2 321 74.1
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 1.5e-126 456.8 332 74.4
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 3.2e-126 455.7 317 73.8
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 9.5e-126 454.1 321 73.2
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 1.2e-125 453.8 317 73.5
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 6.1e-125 451.4 317 72.9
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 2.0e-123 446.4 323 72.8
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 3.4e-123 445.7 319 71.8
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 7.5e-123 444.5 320 73.8
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 9.8e-123 444.1 317 69.7
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 2.8e-122 442.6 317 69.4
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 1.4e-121 440.3 317 70.0
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 9.2e-121 437.6 317 71.0
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 2.7e-120 436.0 317 70.3
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 4.5e-120 435.3 325 69.8
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 1.0e-119 434.1 324 69.1
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 1.3e-119 433.7 324 69.1
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 1.7e-119 433.3 324 69.1
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 8.6e-119 431.0 321 71.0
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 1.1e-118 430.6 338 68.0
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 2.5e-118 429.5 317 68.8
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 2.5e-118 429.5 317 71.9
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 2.5e-118 429.5 336 67.9
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 7.3e-118 427.9 345 63.8
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 9.5e-118 427.6 321 68.5
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 1.6e-117 426.8 317 68.8
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 3.6e-117 425.6 323 68.7
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 4.7e-117 425.2 348 66.7
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 1.4e-116 423.7 318 69.2
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 2.3e-116 422.9 317 67.8
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 2.3e-116 422.9 317 67.8
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 6.8e-116 421.4 336 66.4
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 2.0e-115 419.9 285 73.7
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 5.7e-115 418.3 318 67.9
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 2.9e-114 416.0 302 70.2
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 6.4e-114 414.8 335 64.8
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 1.1e-113 414.1 302 70.2
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 3.5e-112 409.1 317 66.9
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 7.8e-112 407.9 330 63.9
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 2.3e-111 406.4 318 66.7
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 7.3e-110 401.4 320 68.4
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 9.5e-110 401.0 266 72.9
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 4.7e-109 398.7 324 63.3
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 3.7e-106 389.0 319 63.3
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 8.3e-106 387.9 318 64.8
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 1.1e-105 387.5 346 60.7
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 1.2e-104 384.0 324 63.3
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 3.5e-104 382.5 265 74.0
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 1.0e-103 380.9 328 61.6
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 1.4e-100 370.5 323 62.5
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 2.3e-100 369.8 236 76.7
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 8.9e-100 367.9 325 61.5
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 4.3e-94 349.0 327 59.0
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 2.9e-90 336.3 273 62.6
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 6.0e-88 328.6 318 59.1
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 9.6e-86 321.2 297 62.0
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 1.1e-84 317.8 324 53.7
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 2.4e-81 306.6 320 53.1
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 3.9e-79 299.3 322 52.5
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 1.9e-78 297.0 355 50.4
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 1.6e-77 293.9 316 50.0
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 2.1e-69 266.9 189 73.5
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 2.8e-69 266.5 199 68.3
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 1.5e-67 260.8 319 46.4
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 2.6e-67 260.0 186 71.0
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 9.9e-67 258.1 225 62.7
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 1.6e-64 250.8 159 81.1
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 2.7e-64 250.0 322 48.1
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 9.7e-54 214.9 200 57.5
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 1.4e-44 184.5 252 44.8
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 9.4e-41 171.8 90 97.8
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 2.3e-39 167.2 110 75.5
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 6.7e-39 165.6 110 74.5
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 2.3e-23 114.0 269 29.0
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 6.7e-23 112.5 110 58.2
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 1.2e-19 101.7 120 45.0
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 8.0e-16 89.0 79 65.8
Cfa016299 Carpinus fangiana HOM05D002465 ORTHO05D008860 2.4e-12 77.4 82 59.8


User provided reference genes

Program Settings