Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa016194 Carpinus fangiana HOM05D008044 ORTHO05D010106 1.2e-91 339.7 161 100.0
Haze_00261 Corylus avellana HOM05D008044 ORTHO05D010106 2.1e-72 275.8 133 97.0
QL09p007646 Quercus lobata HOM05D008044 ORTHO05D010106 3.4e-70 268.5 193 71.5
CiPaw.06G043900 Carya illinoinensis HOM05D008044 ORTHO05D010106 1.9e-68 262.7 162 79.6
Dinv35361 Davidia involucrata HOM05D008044 ORTHO05D010106 9.9e-62 240.4 164 72.0
Sabra15G0006200 Salix brachista HOM05D002361 ORTHO05D002843 1.4e-60 236.5 160 74.4
Glyma.04G232600 Glycine max HOM05D008044 ORTHO05D010106 2.4e-60 235.7 166 72.9
CsaV3_3G019660 Cucumis sativus L. HOM05D008044 ORTHO05D010106 2.3e-58 229.2 164 72.0
Manes.01G037300 Manihot esculenta HOM05D008044 ORTHO05D010106 3.9e-58 228.4 161 72.0
Glyma.06G132400 Glycine max HOM05D008044 ORTHO05D010106 5.1e-58 228.0 166 71.1
Sed0010771 Sechium edule HOM05D008044 ORTHO05D010106 8.7e-58 227.3 164 72.0
Medtr3g092020 Medicago truncatula HOM05D008044 ORTHO05D010106 1.9e-57 226.1 163 68.1
arahy.Tifrunner.gnm1.ann1.QU8WMY Arachis hypogaea HOM05D008044 ORTHO05D010106 2.5e-57 225.7 166 69.9
MELO3C019381.2 Cucumis melo HOM05D008044 ORTHO05D010106 2.5e-57 225.7 164 72.0
TPR.G33642 Trifolium pratense HOM05D008044 ORTHO05D010106 9.6e-57 223.8 166 67.5
arahy.Tifrunner.gnm1.ann1.4AVA7A Arachis hypogaea HOM05D008044 ORTHO05D010106 3.6e-56 221.9 166 68.7
Dinv29244 Davidia involucrata HOM05D008044 ORTHO05D010106 1.4e-55 219.9 163 67.5
Phvul.009G048200 Phaseolus vulgaris HOM05D008044 ORTHO05D010106 1.4e-55 219.9 160 69.4
Atru.chr12.2313 Acer truncatum HOM05D008044 ORTHO05D010106 4.0e-55 218.4 166 68.1
Lalb_Chr23g0271711 Lupinus albus HOM05D008044 ORTHO05D010106 4.0e-55 218.4 162 67.3
Psat5g074880 Pisum sativum HOM05D008044 ORTHO05D010106 5.3e-55 218.0 163 65.6
Duzib205G1586 Durio zibethinus HOM05D008044 ORTHO05D010106 6.9e-55 217.6 164 67.7
CiPaw.05G200900 Carya illinoinensis HOM05D008044 ORTHO05D010106 3.4e-54 215.3 162 70.4
GSVIVG01038604001 Vitis vinifera HOM05D008044 ORTHO05D010106 7.6e-54 214.2 164 68.3
TAR636G0016 Trochodendron aralioides HOM05D008044 ORTHO05D010106 9.9e-54 213.8 163 71.2
Ciclev10022664m.g Citrus clementina HOM05D008044 ORTHO05D010106 2.9e-53 212.2 162 67.9
Lj1g0025539 Lotus japonicus HOM05D008044 ORTHO05D010106 6.4e-53 211.1 164 66.5
AUR62035573 Chenopodium quinoa HOM05D008044 ORTHO05D010106 1.4e-52 209.9 159 64.8
Eucgr.A01433 Eucalyptus grandis HOM05D008044 ORTHO05D010106 4.2e-52 208.4 164 65.2
CSS0007407 Camellia sinensis var. sinensis HOM05D008044 ORTHO05D010106 9.3e-52 207.2 164 64.6
AUR62006056 Chenopodium quinoa HOM05D008044 ORTHO05D010106 1.6e-51 206.5 159 64.2
Thecc.03G204500 Theobroma cacao HOM05D008044 ORTHO05D010106 2.7e-51 205.7 164 64.0
PSO063G1947 Papaver somniferum HOM05D008044 ORTHO05D010106 3.9e-50 201.8 163 62.0
Aqoxy5G02418 Aquilegia oxysepala HOM05D008044 ORTHO05D010106 5.1e-50 201.4 162 63.6
ClCG05G009120 Citrullus lanatus HOM05D008044 ORTHO05D010106 1.1e-49 200.3 135 73.3
Hund11636 Selenicereus undatus HOM05D008044 ORTHO05D010106 1.1e-49 200.3 165 64.2
Gohir.D03G116200 Gossypium hirsutum HOM05D008044 ORTHO05D010106 3.3e-49 198.7 164 62.8
Gorai.003G122500 Gossypium raimondii HOM05D008044 ORTHO05D010106 3.3e-49 198.7 164 62.8
Gohir.A03G051500 Gossypium hirsutum HOM05D008044 ORTHO05D010106 4.3e-49 198.4 164 62.8
MSTRG.8632 Avicennia marina HOM05D008044 ORTHO05D010106 1.6e-48 196.4 162 63.0
SGA_v2.0_scaffold44G16829 Striga asiatica HOM05D008044 ORTHO05D010106 6.2e-48 194.5 160 63.8
PGR042G2636 Punica granatum HOM05D008044 ORTHO05D010106 3.1e-47 192.2 160 62.5
Migut.F00176 Erythranthe guttata HOM05D008044 ORTHO05D010106 6.9e-47 191.0 162 61.1
Actinidia08675 Actinidia chinensis HOM05D008044 ORTHO05D010106 9.0e-47 190.7 131 67.2
Sc25g0000980 Simmondsia chinensis HOM05D008044 ORTHO05D010106 2.0e-46 189.5 163 61.3
Lsat_1_v5_gn_2_135221 Lactuca sativa HOM05D008044 ORTHO05D010106 3.4e-46 188.7 164 57.3
Ca_16735_v3 Cicer arietinum L. HOM05D008044 ORTHO05D010106 5.8e-46 188.0 133 71.4
Cc02_g01150 Coffea canephora HOM05D008044 ORTHO05D010106 1.7e-45 186.4 163 62.0
DCAR_020347 Daucus carota HOM05D008044 ORTHO05D010106 2.2e-45 186.0 162 61.7
CAN.G481.61 Capsicum annuum HOM05D008044 ORTHO05D010106 3.8e-45 185.3 159 59.7
HanXRQChr04g0100441 Helianthus annuus HOM05D008044 ORTHO05D010106 4.9e-45 184.9 163 58.9
PGSC0003DMG400018537 Solanum tuberosum HOM05D008044 ORTHO05D010106 1.9e-44 183.0 159 58.5
CANSAT21G1192 Cannabis sativa HOM05D008044 ORTHO05D010106 1.2e-43 180.3 162 61.1
Nitab4.5_0008197g0010 Nicotiana tabacum HOM05D008044 ORTHO05D010106 1.6e-43 179.9 160 59.4
Solyc03g082670.3 Solanum lycopersicum HOM05D008044 ORTHO05D010106 1.6e-43 179.9 159 58.5
EL10Ac3g05235 Beta vulgaris HOM05D008044 ORTHO05D010106 7.9e-43 177.6 130 65.4
ATR0620G028 Amborella trichopoda HOM05D008044 ORTHO05D010106 1.0e-42 177.2 159 57.2
MBI04_g11918_MAGBIO Magnolia biondii HOM05D008044 ORTHO05D010106 1.3e-42 176.8 187 54.0
Hma1.2p1_0512F.1_g169310 Hydrangea macrophylla HOM05D008044 ORTHO05D010106 6.7e-42 174.5 130 69.2
Zm00001eb187590 Zea mays HOM05D008044 ORTHO05D010106 1.9e-41 172.9 159 56.0
PSO782G0454 Papaver somniferum HOM05D008044 ORTHO05D010106 1.6e-40 169.9 131 62.6
Oeu037043.1 Olea europaea HOM05D001626 ORTHO05D010106 2.8e-40 169.1 154 57.1
COL.COLO4_16822 Corchorus olitorius HOM05D004333 ORTHO05D005363 6.2e-40 167.9 137 65.0
Ah.07g205140 Amaranthus hybridus HOM05D008044 ORTHO05D010106 2.4e-39 166.0 158 53.8
SalBow4G0010 Salvia bowleyana HOM05D008044 ORTHO05D010106 2.4e-39 166.0 165 55.2
SGA_v2.0_scaffold18G08440 Striga asiatica HOM05D008044 ORTHO05D010106 1.2e-38 163.7 161 54.7
Rhsim03G0212200 Rhododendron simsii HOM05D004333 ORTHO05D005363 2.2e-37 159.5 133 60.2
SEGI_00721 Sequoiadendron giganteum HOM05D008044 ORTHO05D010106 1.4e-36 156.8 176 47.2
Nitab4.5_0010367g0020 Nicotiana tabacum HOM05D008044 ORTHO05D010106 3.2e-36 155.6 130 59.2
Sopen03g022430 Solanum pennellii HOM05D008044 ORTHO05D010106 1.3e-34 150.2 126 60.3
VMungo1309G3147 Vigna mungo HOM05D004333 ORTHO05D005363 2.1e-27 126.3 80 72.5
Zm00001eb421680 Zea mays HOM05D001260 ORTHO05D010106 2.7e-27 125.9 94 60.6
Peaxi162Scf00740g00427 Petunia axillaris HOM05D008044 ORTHO05D010106 5.7e-25 118.2 162 43.2
Lsat_1_v5_gn_9_14140 Lactuca sativa HOM05D008044 ORTHO05D010106 4.8e-24 115.2 137 48.9
CDE02G3408 Ceratophyllum demersum HOM05D008044 ORTHO05D010106 1.1e-23 114.0 110 52.7
Mapoly0007s0051 Marchantia polymorpha HOM05D008044 ORTHO05D010106 6.9e-23 111.3 164 39.0
AagrBONN_evm.TU.Sc2ySwM_117.1515 Anthoceros agrestis HOM05D008044 ORTHO05D010106 2.5e-20 102.8 187 33.7
Os02g0686500 Oryza sativa ssp. japonica HOM05D008044 ORTHO05D010106 7.2e-20 101.3 80 58.8
Nn1g00365 Nelumbo nucifera HOM05D008044 ORTHO05D010106 3.0e-18 95.9 83 66.3
ECA238G1983 Erigeron canadensis HOM05D008044 ORTHO05D010106 6.3e-16 88.2 83 59.0


User provided reference genes

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