Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 8.5e-235 816.6 411 100.0
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 5.0e-211 737.6 401 90.8
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 1.1e-205 719.9 408 87.7
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 3.1e-200 701.8 401 86.3
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 6.8e-200 700.7 392 86.2
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 1.5e-199 699.5 401 85.3
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 1.5e-199 699.5 393 88.3
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 7.5e-199 697.2 399 85.2
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 1.3e-198 696.4 401 84.8
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 6.4e-198 694.1 373 88.7
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 6.4e-198 694.1 402 86.1
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 8.3e-198 693.7 401 86.0
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.4e-197 693.0 404 86.9
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 1.4e-197 693.0 400 87.5
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.4e-197 692.2 405 86.7
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 4.1e-197 691.4 394 84.3
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 5.4e-197 691.0 400 86.0
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 5.4e-197 691.0 399 84.5
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 7.1e-197 690.6 392 84.9
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 7.1e-197 690.6 393 84.2
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 1.6e-196 689.5 402 84.1
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 1.6e-196 689.5 392 86.2
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 2.1e-196 689.1 401 84.8
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 4.6e-196 688.0 405 85.7
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 4.6e-196 688.0 394 84.3
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 6.0e-196 687.6 397 83.9
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 6.0e-196 687.6 404 86.4
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 1.0e-195 686.8 401 83.5
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 1.3e-195 686.4 396 84.6
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 2.3e-195 685.6 401 82.8
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 5.1e-195 684.5 401 82.5
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 8.6e-195 683.7 370 89.2
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 1.5e-194 682.9 373 87.1
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 2.5e-194 682.2 368 89.1
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 3.3e-194 681.8 419 81.6
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 3.3e-194 681.8 392 85.5
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 3.3e-194 681.8 392 86.0
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 4.3e-194 681.4 397 82.6
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 4.3e-194 681.4 397 83.6
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 5.6e-194 681.0 397 82.6
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 9.6e-194 680.2 401 82.3
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 9.6e-194 680.2 401 82.3
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 1.2e-193 679.9 401 84.0
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 8.1e-193 677.2 398 82.4
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 8.1e-193 677.2 395 83.3
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 1.4e-192 676.4 396 82.8
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 1.8e-192 676.0 368 87.2
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 3.1e-192 675.2 396 82.6
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 4.0e-192 674.9 401 81.5
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 4.0e-192 674.9 400 82.2
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 6.8e-192 674.1 398 81.4
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 6.8e-192 674.1 402 81.8
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 3.4e-191 671.8 401 82.3
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 7.6e-191 670.6 428 78.3
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 7.6e-191 670.6 403 82.4
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 9.9e-191 670.2 399 82.0
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 9.9e-191 670.2 372 86.0
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 2.9e-190 668.7 402 81.3
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.4e-189 666.4 401 84.0
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 3.2e-189 665.2 370 85.7
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 7.1e-189 664.1 406 81.5
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 7.1e-189 664.1 368 85.6
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 9.3e-189 663.7 375 84.5
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 9.3e-189 663.7 385 82.6
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 1.2e-188 663.3 404 80.7
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 1.6e-188 662.9 405 80.7
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 4.6e-188 661.4 404 80.4
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 1.7e-187 659.4 373 84.5
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 2.5e-186 655.6 364 86.0
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 4.3e-186 654.8 423 76.6
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 4.8e-185 651.4 372 83.6
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 9.0e-184 647.1 371 82.2
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 2.0e-183 646.0 389 79.7
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 1.1e-181 640.2 364 83.5
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 4.2e-181 638.3 379 81.5
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 7.1e-181 637.5 397 77.8
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 7.8e-180 634.0 423 78.3
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 5.6e-178 627.9 373 81.8
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 3.6e-177 625.2 375 80.8
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 6.2e-177 624.4 411 74.5
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 7.6e-175 617.5 340 87.4
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 1.3e-174 616.7 368 81.0
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 3.5e-172 608.6 375 76.8
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 3.5e-172 608.6 429 72.3
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 6.0e-172 607.8 340 84.4
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.3e-171 606.7 452 72.3
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 2.3e-171 605.9 380 75.8
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 3.9e-171 605.1 375 76.5
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.9e-166 589.0 376 77.1
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 2.5e-165 585.9 389 75.8
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 1.2e-164 583.6 432 69.9
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 6.7e-163 577.8 321 86.6
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 3.3e-162 575.5 491 64.0
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 7.6e-159 564.3 355 77.7
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.7e-158 563.1 394 70.6
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 1.1e-154 550.4 271 98.9
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 1.9e-154 549.7 326 82.5
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 9.7e-154 547.4 363 71.9
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 1.3e-150 537.0 296 87.8
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 1.3e-142 510.4 367 65.9
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 1.4e-141 506.9 374 66.8
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 2.1e-140 503.1 317 79.8
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 4.7e-140 501.9 309 79.6
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 1.2e-135 487.3 316 77.8
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 5.7e-130 468.4 431 60.6
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 4.7e-116 422.2 259 80.3
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 1.2e-111 407.5 324 62.3
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 2.4e-104 383.3 401 53.1
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 7.6e-42 175.6 97 80.4
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 3.4e-34 150.2 86 82.6
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 3.0e-30 137.1 129 59.7
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 9.7e-29 132.1 81 72.8
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.7e-28 131.3 94 70.2
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 4.5e-26 123.2 70 85.7
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 2.2e-20 104.4 57 84.2
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 2.2e-17 94.4 49 91.8
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 4.5e-10 70.1 42 73.8
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 4.5e-10 70.1 46 69.6
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 5.9e-10 69.7 49 65.3
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 1.0e-06 58.9 40 70.0


User provided reference genes

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