Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa014713 Carpinus fangiana HOM05D008991 ORTHO05D010442 2.2e-115 420.2 508 100.0
Haze_13344 Corylus avellana HOM05D008991 ORTHO05D010442 2.3e-56 224.2 532 67.1
CiPaw.04G131500 Carya illinoinensis HOM05D008991 ORTHO05D010442 2.9e-22 110.9 209 42.6
QL08p041343 Quercus lobata HOM05D008991 ORTHO05D010442 1.1e-18 99.0 252 40.5
Cpa.g.sc209.19 Carica papaya HOM05D008991 ORTHO05D010442 2.9e-14 84.3 202 39.1
CiPaw.03G186100 Carya illinoinensis HOM05D008991 ORTHO05D010442 1.1e-13 82.4 209 38.3
Potri.013G118600 Populus trichocarpa HOM05D026498 ORTHO05D010442 4.1e-13 80.5 203 36.5
BolC4t28480H Brassica oleracea HOM05D008991 ORTHO05D010442 5.4e-13 80.1 193 40.9
Gohir.D11G064300 Gossypium hirsutum HOM05D020995 ORTHO05D010442 5.4e-13 80.1 246 37.0
Sp4g24690 Schrenkiella parvula HOM05D008991 ORTHO05D010442 5.4e-13 80.1 198 36.4
Gorai.007G069500 Gossypium raimondii HOM05D020995 ORTHO05D010442 1.6e-12 78.6 249 35.7
AT2G42560 Arabidopsis thaliana HOM05D008991 ORTHO05D010442 2.1e-12 78.2 200 35.0
Peaxi162Scf00469g00010 Petunia axillaris HOM05D011296 ORTHO05D010442 2.1e-12 78.2 222 35.1
A04p32280 Brassica napus HOM05D008991 ORTHO05D010442 2.7e-12 77.8 193 38.9
BraA04t18682Z Brassica rapa HOM05D008991 ORTHO05D010442 2.7e-12 77.8 193 38.9
BcaC02g07231 Brassica carinata HOM05D008991 ORTHO05D010442 3.5e-12 77.4 193 39.9
C04p69790 Brassica napus HOM05D008991 ORTHO05D010442 4.6e-12 77.0 193 39.4
AL4G41110 Arabidopsis lyrata HOM05D008991 ORTHO05D010442 1.7e-11 75.1 197 34.0
Carub.0004s2501 Capsella rubella HOM05D008991 ORTHO05D010442 1.7e-11 75.1 195 34.9
PGR142G1329 Punica granatum HOM05D008991 ORTHO05D010442 1.7e-11 75.1 193 39.4
Sabra19G0100600 Salix brachista HOM05D026498 ORTHO05D010442 3.0e-11 74.3 206 35.9
Ciclev10014817m.g Citrus clementina HOM05D008991 ORTHO05D010442 3.9e-11 73.9 233 44.6
BcaB06g29254 Brassica carinata HOM05D008991 ORTHO05D010442 5.1e-11 73.6 193 36.8
Sabra19G0104000 Salix brachista HOM05D026498 ORTHO05D010442 5.1e-11 73.6 206 37.9
CARHR137700 Cardamine hirsuta HOM05D008991 ORTHO05D010442 6.6e-11 73.2 192 33.9
BcaB01g03456 Brassica carinata HOM05D008991 ORTHO05D010442 1.1e-10 72.4 192 34.4
MELO3C019755.2 Cucumis melo HOM05D024384 ORTHO05D010442 1.1e-10 72.4 211 37.9
Nitab4.5_0008704g0010 Nicotiana tabacum HOM05D011296 ORTHO05D013264 1.5e-10 72.0 243 32.1
Nitab4.5_0014887g0020 Nicotiana tabacum HOM05D011296 ORTHO05D013264 7.3e-10 69.7 235 33.6
COL.COLO4_36295 Corchorus olitorius HOM05D020995 ORTHO05D010442 1.2e-09 68.9 189 40.7
Dinv15461 Davidia involucrata HOM05D008991 ORTHO05D010442 1.2e-09 68.9 203 35.0
Gohir.A11G060200 Gossypium hirsutum HOM05D020995 ORTHO05D010442 1.6e-09 68.6 269 35.3
Oeu036098.1 Olea europaea HOM05D008991 ORTHO05D010442 1.6e-09 68.6 213 36.2
Actinidia30443 Actinidia chinensis HOM05D008991 ORTHO05D010442 4.7e-09 67.0 191 35.1
Potri.019G090300 Populus trichocarpa HOM05D026498 ORTHO05D010442 6.2e-09 66.6 193 35.8
CsaV3_6G018720 Cucumis sativus L. HOM05D024384 ORTHO05D010442 8.1e-09 66.2 206 32.5
Eucgr.K01100 Eucalyptus grandis HOM05D020995 ORTHO05D010442 1.4e-08 65.5 262 38.2
Lsat_1_v5_gn_8_139801 Lactuca sativa HOM05D008991 ORTHO05D010442 4.0e-08 63.9 189 36.0
ClCG02G017970 Citrullus lanatus HOM05D024384 ORTHO05D010442 8.9e-08 62.8 225 45.3
Sopen07g027330 Solanum pennellii HOM05D011296 ORTHO05D013264 1.5e-07 62.0 202 33.7
CAN.G1360.5 Capsicum annuum HOM05D011296 ORTHO05D013264 4.4e-07 60.5 214 31.8
Manes.13G139000 Manihot esculenta HOM05D012920 ORTHO05D012188 5.8e-07 60.1 108 46.3
Aa31LG1G24360 Aethionema arabicum HOM05D008991 ORTHO05D010442 7.6e-07 59.7 191 31.9
PGR142G3325 Punica granatum HOM05D020995 ORTHO05D010442 1.3e-06 58.9 209 35.4
Cc05_g08110 Coffea canephora HOM05D008991 ORTHO05D010442 1.7e-06 58.5 202 30.2
Migut.H02156 Erythranthe guttata HOM05D008991 ORTHO05D010442 1.7e-06 58.5 193 33.7
BcaNung03228 Brassica carinata HOM05D008991 ORTHO05D010442 2.2e-06 58.2 193 33.7
CANSAT64G0119 Cannabis sativa HOM05D008991 ORTHO05D010442 2.2e-06 58.2 204 34.8
Solyc07g053360.4 Solanum lycopersicum HOM05D011296 ORTHO05D013264 2.9e-06 57.8 193 33.2
Sc21g0003130 Simmondsia chinensis HOM05D011296 ORTHO05D013264 3.7e-06 57.4 238 31.1
Sed0024903 Sechium edule HOM05D024384 ORTHO05D010442 6.4e-06 56.6 198 31.3


User provided reference genes

Program Settings