Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 0.0e+00 1156.0 595 100.0
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 0.0e+00 1089.7 614 93.0
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 1.4e-241 839.7 613 72.8
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 1.8e-230 802.7 674 66.3
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 4.3e-211 738.4 603 64.7
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 1.0e-196 690.6 611 61.2
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 2.1e-194 682.9 601 61.2
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 5.3e-193 678.3 619 59.9
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 1.3e-191 673.7 593 62.7
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 3.8e-191 672.2 600 59.3
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 8.4e-191 671.0 610 60.3
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 1.9e-190 669.8 618 59.9
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 2.4e-190 669.5 609 60.9
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 3.0e-188 662.5 594 60.9
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 2.8e-186 656.0 599 59.3
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 2.8e-186 656.0 609 59.6
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 1.1e-185 654.1 595 60.2
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 1.4e-185 653.7 591 59.7
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 1.8e-185 653.3 595 61.8
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 5.3e-185 651.7 595 58.8
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 9.0e-185 651.0 621 56.8
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 1.5e-184 650.2 620 57.1
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 9.9e-184 647.5 597 58.8
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 2.9e-183 646.0 621 56.7
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 8.4e-183 644.4 595 59.3
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 1.6e-181 640.2 603 58.2
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 3.5e-181 639.0 599 58.4
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 3.9e-180 635.6 597 58.6
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 7.4e-179 631.3 611 57.0
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 7.4e-179 631.3 593 58.5
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 2.0e-176 623.2 658 54.3
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 1.3e-175 620.5 595 59.2
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 1.1e-174 617.5 599 55.1
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 4.2e-174 615.5 615 56.7
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 2.1e-173 613.2 583 56.3
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 2.8e-170 602.8 560 59.8
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.4e-169 600.5 605 55.4
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 3.4e-168 595.9 621 53.3
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 3.4e-168 595.9 656 50.9
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 1.7e-167 593.6 604 55.3
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 3.8e-167 592.4 599 57.3
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 7.2e-166 588.2 596 55.7
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.6e-165 587.0 605 54.5
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 6.1e-165 585.1 613 53.5
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 1.3e-162 577.4 596 54.4
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 1.8e-161 573.5 597 52.4
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 3.1e-161 572.8 597 52.1
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 4.1e-161 572.4 607 51.6
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 7.2e-158 561.6 601 51.6
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 1.8e-156 557.0 608 53.5
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 2.0e-155 553.5 601 50.4
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 1.4e-153 547.4 593 51.3
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 4.1e-153 545.8 603 52.4
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 1.4e-148 530.8 612 49.0
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 3.0e-148 529.6 637 48.7
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 2.6e-144 516.5 659 45.1
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 3.5e-144 516.2 617 48.1
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 1.3e-143 514.2 611 49.1
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 1.3e-143 514.2 604 47.5
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 3.2e-142 509.6 607 49.3
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 3.6e-141 506.1 599 48.6
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 4.4e-139 499.2 569 49.6
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 1.3e-138 497.7 529 52.7
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 3.7e-138 496.1 579 49.2
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 3.2e-134 483.0 600 47.2
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 1.6e-133 480.7 598 46.3
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 1.4e-132 477.6 600 46.7
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 1.4e-132 477.6 484 53.3
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 6.3e-130 468.8 599 47.2
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 7.0e-129 465.3 600 46.3
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 2.9e-127 459.9 603 43.8
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.3e-124 450.3 386 62.4
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 8.8e-124 448.4 507 51.7
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.0e-123 447.2 386 62.4
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 7.5e-123 445.3 535 47.7
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 5.9e-120 435.6 386 61.1
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 1.0e-119 434.9 636 42.9
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 4.3e-118 429.5 625 42.1
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 8.0e-117 425.2 612 42.6
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 2.3e-116 423.7 495 47.7
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 3.4e-115 419.9 420 55.0
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 1.3e-114 417.9 602 40.4
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 3.7e-114 416.4 610 41.6
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 6.4e-114 415.6 526 47.0
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 7.0e-113 412.1 611 41.7
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 2.3e-111 407.1 410 52.4
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 3.3e-110 403.3 598 41.6
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 5.6e-110 402.5 611 41.1
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 6.2e-109 399.1 386 57.3
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 4.9e-106 389.4 344 61.0
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 2.4e-105 387.1 650 39.2
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 3.2e-105 386.7 584 41.3
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 5.4e-105 386.0 603 36.8
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 7.0e-105 385.6 381 55.1
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 3.5e-104 383.3 610 39.5
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 5.8e-99 365.9 634 39.0
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 3.9e-95 353.2 561 42.1
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 4.6e-80 303.1 451 38.8
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 7.3e-78 295.8 595 35.1
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 1.7e-74 284.6 449 42.5
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 3.8e-74 283.5 276 56.9
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 2.9e-66 257.3 303 46.5
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 2.3e-39 167.9 160 55.6
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 1.1e-38 165.6 526 27.8
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 2.8e-37 161.0 302 34.1
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 8.2e-37 159.5 557 27.5
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 6.9e-36 156.4 532 28.4
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 1.1e-33 149.1 281 35.6
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 1.5e-30 138.7 512 24.8
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 3.3e-30 137.5 96 74.0
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 7.4e-30 136.3 579 25.0
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 2.7e-24 117.9 141 47.5
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 4.1e-20 104.0 97 59.8
Medtr1g012260 Medicago truncatula HOM05D006351 ORTHO05D007796 2.7e-16 91.3 95 51.6
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 4.7e-16 90.5 145 40.7
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 4.7e-16 90.5 131 44.3
Gohir.A11G232166 Gossypium hirsutum HOM05D006351 ORTHO05D007796 5.0e-10 70.5 60 58.3
Gohir.A04G102300 Gossypium hirsutum HOM05D001271 ORTHO05D007796 6.5e-10 70.1 59 59.3
Gohir.A01G131311 Gossypium hirsutum HOM05D006351 ORTHO05D007796 5.5e-09 67.0 52 61.5
Gohir.A13G118000 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.1e-08 65.1 60 55.0
FvH4_6g18901 Fragaria vesca HOM05D006351 ORTHO05D007796 8.8e-07 59.7 71 46.5
Gohir.A03G098900 Gossypium hirsutum HOM05D001271 ORTHO05D007796 8.8e-07 59.7 48 62.5
Medtr1g013010 Medicago truncatula HOM05D006351 ORTHO05D007796 8.8e-07 59.7 66 51.5
CBR_g18678 Chara braunii HOM05D006351 ORTHO05D007796 4.4e-06 57.4 257 24.9


User provided reference genes

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