Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012740 Carpinus fangiana HOM05D007638 ORTHO05D009805 5.4e-259 897.1 445 100.0
QL12p012553 Quercus lobata HOM05D007638 ORTHO05D009805 1.9e-200 702.6 445 78.9
CiPaw.12G109000 Carya illinoinensis HOM05D007638 ORTHO05D009805 4.3e-200 701.4 450 76.7
Prupe.5G071400 Prunus persica HOM05D007638 ORTHO05D009805 2.1e-178 629.4 454 68.7
Atru.chr9.1327 Acer truncatum HOM05D007638 ORTHO05D009805 5.2e-177 624.8 457 67.6
GSVIVG01001312001 Vitis vinifera HOM05D007638 ORTHO05D009805 2.6e-176 622.5 466 66.3
Thecc.03G253300 Theobroma cacao HOM05D007638 ORTHO05D009805 5.7e-176 621.3 457 67.0
Dinv39130 Davidia involucrata HOM05D007638 ORTHO05D009805 1.1e-174 617.1 481 64.0
Gohir.D09G190600 Gossypium hirsutum HOM05D007638 ORTHO05D009805 2.9e-172 609.0 453 65.6
Manes.02G038700 Manihot esculenta HOM05D007638 ORTHO05D009805 1.9e-171 606.3 455 64.8
Gorai.006G213300 Gossypium raimondii HOM05D007638 ORTHO05D009805 2.5e-171 605.9 453 65.6
Gohir.A09G196000 Gossypium hirsutum HOM05D007638 ORTHO05D009805 5.5e-171 604.7 453 65.1
TWI15G0131 Tripterygium wilfordii HOM05D007638 ORTHO05D009805 3.6e-170 602.1 454 63.7
Lj4g0022413 Lotus japonicus HOM05D007638 ORTHO05D009805 3.0e-169 599.0 454 65.0
Sed0016401 Sechium edule HOM05D007638 ORTHO05D009805 3.3e-168 595.5 453 64.7
MD06G1060400 Malus domestica HOM05D007638 ORTHO05D009805 4.4e-168 595.1 457 66.1
Hma1.2p1_2238F.1_g317800 Hydrangea macrophylla HOM05D007638 ORTHO05D009805 9.7e-168 594.0 456 64.9
TAR636G1390 Trochodendron aralioides HOM05D007638 ORTHO05D009805 1.6e-165 586.6 466 64.2
Potri.003G110600 Populus trichocarpa HOM05D007638 ORTHO05D009805 4.5e-165 585.1 464 65.7
FvH4_5g18700 Fragaria vesca HOM05D007638 ORTHO05D009805 1.0e-164 583.9 455 64.4
Ca_21958_v3 Cicer arietinum L. HOM05D007638 ORTHO05D009805 4.7e-162 575.1 463 62.6
RcHm_v2.0_Chr7g0202991 Rosa chinensis HOM05D007638 ORTHO05D009805 1.0e-161 573.9 458 63.8
CsaV3_5G004170 Cucumis sativus L. HOM05D007638 ORTHO05D009805 1.2e-160 570.5 454 62.3
CANSAT21G1304 Cannabis sativa HOM05D007638 ORTHO05D009805 4.4e-160 568.5 454 62.6
Lalb_Chr16g0389341 Lupinus albus HOM05D007638 ORTHO05D009805 4.1e-158 562.0 461 61.4
Glyma.05G058500 Glycine max HOM05D007638 ORTHO05D009805 1.2e-157 560.5 466 63.7
Ciclev10020230m.g Citrus clementina HOM05D007638 ORTHO05D009805 4.2e-155 552.0 463 61.8
arahy.Tifrunner.gnm1.ann1.UY0NCU Arachis hypogaea HOM05D007638 ORTHO05D009805 5.5e-155 551.6 462 61.0
Nn1g01039 Nelumbo nucifera HOM05D007638 ORTHO05D009805 8.0e-154 547.7 474 58.0
Sabra03G0076700 Salix brachista HOM05D007638 ORTHO05D009805 1.4e-153 547.0 467 62.5
Oeu017018.1 Olea europaea HOM05D007638 ORTHO05D009805 1.8e-153 546.6 475 57.7
HanXRQChr17g0549771 Helianthus annuus HOM05D007638 ORTHO05D009805 2.6e-152 542.7 473 59.0
TPR.G37700 Trifolium pratense HOM05D007638 ORTHO05D009805 8.3e-151 537.7 457 63.0
Cc08_g12610 Coffea canephora HOM05D007638 ORTHO05D009805 1.0e-148 530.8 489 56.6
CAN.G1218.20 Capsicum annuum HOM05D007638 ORTHO05D009805 9.5e-147 524.2 476 56.5
Solyc08g078750.4 Solanum lycopersicum HOM05D007638 ORTHO05D009805 9.5e-147 524.2 472 57.0
Migut.A00967 Erythranthe guttata HOM05D007638 ORTHO05D009805 2.3e-145 519.6 484 57.2
Sopen08g027220 Solanum pennellii HOM05D007638 ORTHO05D009805 3.1e-145 519.2 472 55.9
Hund14529 Selenicereus undatus HOM05D007638 ORTHO05D009805 2.0e-144 516.5 468 56.4
Sc07g0009320 Simmondsia chinensis HOM05D007638 ORTHO05D009805 9.2e-142 507.7 464 55.8
FAN13G2113 Fragaria x ananassa HOM05D007638 ORTHO05D009805 2.0e-141 506.5 424 61.8
arahy.Tifrunner.gnm1.ann1.E4IRCP Arachis hypogaea HOM05D007638 ORTHO05D009805 1.1e-139 500.7 428 59.8
EL10Ac5g13054 Beta vulgaris HOM05D007638 ORTHO05D009805 1.5e-139 500.4 475 54.5
THA.LOC104812781 Tarenaya hassleriana HOM05D007638 ORTHO05D009805 3.3e-139 499.2 483 53.0
PGR031G3001 Punica granatum HOM05D007638 ORTHO05D009805 2.8e-138 496.1 456 55.3
Rhsim09G0039100 Rhododendron simsii HOM05D007638 ORTHO05D009805 3.6e-138 495.7 558 49.5
Eucgr.D02067 Eucalyptus grandis HOM05D007638 ORTHO05D009805 9.8e-136 487.6 361 64.8
Hma1.2p1_3173F.1_g333580 Hydrangea macrophylla HOM05D007638 ORTHO05D009805 4.9e-135 485.3 471 55.2
Lsat_1_v5_gn_3_541 Lactuca sativa HOM05D007638 ORTHO05D009805 6.4e-135 485.0 467 54.8
Psat4g071600 Pisum sativum HOM05D007638 ORTHO05D009805 1.6e-133 480.3 402 61.9
Ah.02g116770 Amaranthus hybridus HOM05D007638 ORTHO05D009805 7.8e-133 478.0 472 50.4
Peaxi162Scf00002g00171 Petunia axillaris HOM05D007638 ORTHO05D009805 1.9e-131 473.4 475 53.5
AUR62007504 Chenopodium quinoa HOM05D007638 ORTHO05D009805 9.9e-128 461.1 472 51.7
ATR1153G083 Amborella trichopoda HOM05D007638 ORTHO05D009805 1.9e-126 456.8 455 49.7
PSO781G0038 Papaver somniferum HOM05D007638 ORTHO05D009805 1.9e-126 456.8 474 53.6
MSTRG.25529 Avicennia marina HOM05D007638 ORTHO05D009805 3.2e-126 456.1 379 57.8
FAN08G1927 Fragaria x ananassa HOM05D007638 ORTHO05D009805 6.0e-125 451.8 454 54.6
SGA_v2.0_scaffold120G32873 Striga asiatica HOM05D007638 ORTHO05D009805 9.5e-123 444.5 536 48.5
Aa31LG2G12650 Aethionema arabicum HOM05D007638 ORTHO05D009805 5.4e-118 428.7 454 49.1
FAN18G0664 Fragaria x ananassa HOM05D007638 ORTHO05D009805 5.4e-118 428.7 296 68.2
CDE11G1220 Ceratophyllum demersum HOM05D007638 ORTHO05D009805 6.6e-116 421.8 465 49.0
PSO541G0423 Papaver somniferum HOM05D007638 ORTHO05D009805 1.9e-115 420.2 395 54.7
ClCG01G003990 Citrullus lanatus HOM05D007638 ORTHO05D009805 4.3e-115 419.1 475 48.8
Nitab4.5_0008481g0020 Nicotiana tabacum HOM05D007638 ORTHO05D009805 1.8e-113 413.7 462 49.8
Sp7g15100 Schrenkiella parvula HOM05D007638 ORTHO05D009805 6.9e-113 411.8 429 50.3
Aqoxy7G00749 Aquilegia oxysepala HOM05D007638 ORTHO05D009805 4.3e-107 392.5 414 51.9
AUR62039957 Chenopodium quinoa HOM05D007638 ORTHO05D009805 5.8e-104 382.1 467 44.3
DCAR_008488 Daucus carota HOM05D007638 ORTHO05D009805 8.4e-103 378.3 309 57.6
Haze_07891 Corylus avellana HOM05D007638 ORTHO05D009805 9.3e-102 374.8 256 84.4
SEGI_06661 Sequoiadendron giganteum HOM05D007638 ORTHO05D009805 1.2e-101 374.4 501 41.3
Nitab4.5_0000312g0180 Nicotiana tabacum HOM05D007638 ORTHO05D009805 1.5e-99 367.5 326 57.7
vmacro00554 Vaccinium macrocarpon HOM05D007638 ORTHO05D009805 4.0e-97 359.4 547 42.6
Duzib084G1003 Durio zibethinus HOM05D007638 ORTHO05D009805 4.6e-93 345.9 346 53.8
PGSC0003DMG400004754 Solanum tuberosum HOM05D007638 ORTHO05D009805 1.2e-88 331.3 356 51.1
Pp3c9_14850 Physcomitrium patens HOM05D007638 ORTHO05D009805 4.5e-88 329.3 492 38.6
Cpa.g.sc29.142 Carica papaya HOM05D007638 ORTHO05D009805 5.9e-80 302.4 304 55.6
Eucgr.D02064 Eucalyptus grandis HOM05D007638 ORTHO05D009805 2.8e-74 283.5 326 48.5
DCAR_008487 Daucus carota HOM05D007638 ORTHO05D009805 5.9e-72 275.8 352 45.2
CBR_g20284 Chara braunii HOM05D007638 ORTHO05D009805 3.8e-71 273.1 377 36.9
AagrBONN_evm.TU.Sc2ySwM_228.4592 Anthoceros agrestis HOM05D007638 ORTHO05D009805 1.6e-69 267.7 480 35.6
MELO3C033998.2 Cucumis melo HOM05D007638 ORTHO05D009805 1.8e-68 264.2 308 49.7
Actinidia02124 Actinidia chinensis HOM05D007638 ORTHO05D009805 1.1e-62 245.0 382 44.0
FAN04G2384 Fragaria x ananassa HOM05D007638 ORTHO05D009805 1.6e-61 241.1 200 58.5
CSS0011551 Camellia sinensis var. sinensis HOM05D007638 ORTHO05D009805 4.9e-42 176.4 95 80.0
CSS0041058 Camellia sinensis var. sinensis HOM05D007638 ORTHO05D009805 6.6e-23 112.8 132 49.2
Eucgr.L01520 Eucalyptus grandis HOM05D007638 ORTHO05D009805 1.1e-20 105.5 133 48.9
Haze_07890 Corylus avellana HOM05D007638 ORTHO05D009805 5.1e-15 86.7 37 97.3
AUR62016519 Chenopodium quinoa HOM05D000032 ORTHO05D009383 2.1e-13 81.3 72 48.6
SGA_v2.0_scaffold8G04635 Striga asiatica HOM05D000032 ORTHO05D009383 2.1e-13 81.3 65 58.5
AUR62001157 Chenopodium quinoa HOM05D000032 ORTHO05D009383 2.8e-13 80.9 64 53.1
AagrBONN_evm.TU.Sc2ySwM_369.192 Anthoceros agrestis HOM05D000032 ORTHO05D009383 1.8e-12 78.2 81 49.4
Glyma.02G068300 Glycine max HOM05D000032 ORTHO05D009383 1.8e-12 78.2 74 51.4
Lsat_1_v5_gn_2_101321 Lactuca sativa HOM05D000032 ORTHO05D009383 1.8e-12 78.2 77 50.6
unitig_0.g181 Utricularia gibba HOM05D000032 ORTHO05D009383 4.0e-12 77.0 67 55.2
Ah.15g094020 Amaranthus hybridus HOM05D000032 ORTHO05D009383 5.2e-12 76.6 62 54.8
EL10Ac7g17945 Beta vulgaris HOM05D000032 ORTHO05D009383 5.2e-12 76.6 89 46.1
Cpa.g.sc17.215 Carica papaya HOM05D000032 ORTHO05D009383 5.2e-12 76.6 67 56.7
TWI32G0219 Tripterygium wilfordii HOM05D000032 ORTHO05D009383 5.2e-12 76.6 49 69.4
Glyma.16G149800 Glycine max HOM05D000032 ORTHO05D009383 8.9e-12 75.9 63 55.6
FvH4_6g35850 Fragaria vesca HOM05D000032 ORTHO05D009383 1.2e-11 75.5 72 50.0
FAN02G2103 Fragaria x ananassa HOM05D000032 ORTHO05D009383 1.2e-11 75.5 72 50.0
FAN05G0348 Fragaria x ananassa HOM05D000032 ORTHO05D009383 1.2e-11 75.5 72 50.0
FAN14G3162 Fragaria x ananassa HOM05D000032 ORTHO05D009383 1.2e-11 75.5 72 50.0
FAN14G3671 Fragaria x ananassa HOM05D000032 ORTHO05D009383 1.2e-11 75.5 72 50.0
RcHm_v2.0_Chr2g0147891 Rosa chinensis HOM05D000032 ORTHO05D009383 1.2e-11 75.5 48 64.6
Pp3c8_12050 Physcomitrium patens HOM05D000032 ORTHO05D009383 1.5e-11 75.1 50 66.0
Sc14g0008440 Simmondsia chinensis HOM05D000032 ORTHO05D009383 1.5e-11 75.1 59 59.3
Solyc01g006340.3 Solanum lycopersicum HOM05D000032 ORTHO05D009383 1.5e-11 75.1 63 57.1
AL3G10020 Arabidopsis lyrata HOM05D000032 ORTHO05D009383 2.0e-11 74.7 49 63.3
Sp3g00020 Schrenkiella parvula HOM05D000032 ORTHO05D009383 2.0e-11 74.7 56 58.9
Lalb_Chr03g0043781 Lupinus albus HOM05D000032 ORTHO05D009383 2.6e-11 74.3 51 62.7
THA.LOC104823368 Tarenaya hassleriana HOM05D000032 ORTHO05D009383 2.6e-11 74.3 52 59.6
Lj1A470G20 Lonicera japonica HOM05D000032 ORTHO05D009383 3.4e-11 73.9 87 46.0
Lj1A478G35 Lonicera japonica HOM05D000032 ORTHO05D009383 3.4e-11 73.9 87 46.0
PGR044G2709 Punica granatum HOM05D000032 ORTHO05D009383 3.4e-11 73.9 79 46.8
MSTRG.18394 Avicennia marina HOM05D000032 ORTHO05D009383 4.4e-11 73.6 65 60.0
DCAR_008449 Daucus carota HOM05D000032 ORTHO05D009383 4.4e-11 73.6 63 54.0
HanXRQChr14g0453351 Helianthus annuus HOM05D000032 ORTHO05D009383 4.4e-11 73.6 72 50.0
Nitab4.5_0003436g0100 Nicotiana tabacum HOM05D000032 ORTHO05D009383 4.4e-11 73.6 63 52.4
Peaxi162Scf00192g00012 Petunia axillaris HOM05D000032 ORTHO05D009383 4.4e-11 73.6 63 52.4
PGSC0003DMG400032150 Solanum tuberosum HOM05D000032 ORTHO05D009383 4.4e-11 73.6 84 45.2
CARHR074860 Cardamine hirsuta HOM05D000032 ORTHO05D009383 5.8e-11 73.2 48 62.5
Sopen01g002340 Solanum pennellii HOM05D000032 ORTHO05D009383 5.8e-11 73.2 84 46.4
CsaV3_3G020080 Cucumis sativus L. HOM05D000032 ORTHO05D009383 7.6e-11 72.8 54 59.3
Aqoxy7G03583 Aquilegia oxysepala HOM05D000032 ORTHO05D009383 9.9e-11 72.4 63 54.0
Eucgr.K02338 Eucalyptus grandis HOM05D000032 ORTHO05D009383 9.9e-11 72.4 48 64.6
Eucgr.L03255 Eucalyptus grandis HOM05D000032 ORTHO05D009383 9.9e-11 72.4 48 64.6
Prupe.3G315400 Prunus persica HOM05D001005 ORTHO05D000836 9.9e-11 72.4 48 62.5
VMungo0464G1688 Vigna mungo HOM05D000032 ORTHO05D009383 9.9e-11 72.4 63 50.8
Nn3g18407 Nelumbo nucifera HOM05D000032 ORTHO05D009383 1.3e-10 72.0 64 56.2
AT3G02065 Arabidopsis thaliana HOM05D000032 ORTHO05D009383 1.7e-10 71.6 49 61.2
MELO3C014755.2 Cucumis melo HOM05D000032 ORTHO05D009383 1.7e-10 71.6 55 58.2
Migut.D00539 Erythranthe guttata HOM05D000032 ORTHO05D009383 1.7e-10 71.6 57 61.4
PSO384G0785 Papaver somniferum HOM05D000032 ORTHO05D009383 1.7e-10 71.6 61 54.1
FAN09G2555 Fragaria x ananassa HOM05D000032 ORTHO05D009383 2.2e-10 71.2 72 48.6
Manes.04G096700 Manihot esculenta HOM05D000032 ORTHO05D009383 2.2e-10 71.2 53 60.4
TPR.G6050 Trifolium pratense HOM05D000032 ORTHO05D009383 2.2e-10 71.2 58 55.2
Aa31LG5G11250 Aethionema arabicum HOM05D000032 ORTHO05D009383 2.9e-10 70.9 55 54.5
Cc01_g03330 Coffea canephora HOM05D000032 ORTHO05D009383 2.9e-10 70.9 57 56.1
GSVIVG01032945001 Vitis vinifera HOM05D007638 ORTHO05D009383 2.9e-10 70.9 48 64.6
ClCG05G012450 Citrullus lanatus HOM05D000032 ORTHO05D009383 3.7e-10 70.5 42 66.7
COL.COLO4_13406 Corchorus olitorius HOM05D000032 ORTHO05D009383 3.7e-10 70.5 58 58.6
Thhalv10020567m.g Eutrema salsugineum HOM05D000032 ORTHO05D009383 3.7e-10 70.5 48 60.4
Hma1.2p1_0098F.1_g048240 Hydrangea macrophylla HOM05D000032 ORTHO05D009383 3.7e-10 70.5 61 55.7
MD17G1003800 Malus domestica HOM05D000032 ORTHO05D009383 3.7e-10 70.5 48 62.5
PSO339G1569 Papaver somniferum HOM05D000032 ORTHO05D009383 3.7e-10 70.5 61 54.1
Thecc.04G052100 Theobroma cacao HOM05D000032 ORTHO05D009383 3.7e-10 70.5 60 55.0
Cfa010055 Carpinus fangiana HOM05D001005 ORTHO05D000836 4.9e-10 70.1 49 61.2
Potri.014G140100 Populus trichocarpa HOM05D000032 ORTHO05D009383 4.9e-10 70.1 47 59.6
Atru.chr12.440 Acer truncatum HOM05D000032 ORTHO05D009383 6.4e-10 69.7 48 64.6
CSS0028588 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D009383 6.4e-10 69.7 74 48.6
Ca_04506_v3 Cicer arietinum L. HOM05D000032 ORTHO05D009383 6.4e-10 69.7 43 65.1
Mapoly0135s0036 Marchantia polymorpha HOM05D000032 ORTHO05D009383 6.4e-10 69.7 63 52.4
CSS0019503 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D009383 8.4e-10 69.3 40 70.0
Rhsim13G0227500 Rhododendron simsii HOM05D006358 ORTHO05D009383 8.4e-10 69.3 46 65.2
vmacro21760 Vaccinium macrocarpon HOM05D000032 ORTHO05D009383 8.4e-10 69.3 59 54.2
Carub.0003s0002 Capsella rubella HOM05D000032 ORTHO05D009383 1.4e-09 68.6 49 59.2
CBR_g3873 Chara braunii HOM05D000032 ORTHO05D009383 1.4e-09 68.6 40 62.5
MBI11_g17278_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D009383 1.4e-09 68.6 49 59.2
CAN.G140.9 Capsicum annuum HOM05D000032 ORTHO05D009383 1.9e-09 68.2 63 50.8
CiPaw.14G093500 Carya illinoinensis HOM05D000032 ORTHO05D009383 1.9e-09 68.2 53 54.7
TAR633G1362 Trochodendron aralioides HOM05D000032 ORTHO05D009383 1.9e-09 68.2 55 54.5
Zm00001eb235630 Zea mays HOM05D000032 ORTHO05D009383 1.9e-09 68.2 68 52.9
arahy.Tifrunner.gnm1.ann1.8UB6M3 Arachis hypogaea HOM05D000032 ORTHO05D009383 2.4e-09 67.8 75 46.7
CDE07G0397 Ceratophyllum demersum HOM05D000032 ORTHO05D009383 2.4e-09 67.8 41 65.9
ECA238G2389 Erigeron canadensis HOM05D000032 ORTHO05D009383 2.4e-09 67.8 65 50.8
Medtr6g033070 Medicago truncatula HOM05D000032 ORTHO05D009383 2.4e-09 67.8 80 45.0
arahy.Tifrunner.gnm1.ann1.BLPY9G Arachis hypogaea HOM05D007638 ORTHO05D009383 3.2e-09 67.4 109 39.4
arahy.Tifrunner.gnm1.ann1.U3NDHF Arachis hypogaea HOM05D000032 ORTHO05D009383 3.2e-09 67.4 63 54.0
Sabra14G0105500 Salix brachista HOM05D000032 ORTHO05D009383 4.1e-09 67.0 47 57.4
Lj3g0015614 Lotus japonicus HOM05D000032 ORTHO05D009383 5.4e-09 66.6 43 58.1
Psat1g014560 Pisum sativum HOM05D000032 ORTHO05D009383 5.4e-09 66.6 77 42.9
QL02p068178 Quercus lobata HOM05D000032 ORTHO05D009383 5.4e-09 66.6 48 58.3
Ciclev10017882m.g Citrus clementina HOM05D000032 ORTHO05D009383 7.1e-09 66.2 40 62.5
Duzib187G1127 Durio zibethinus HOM05D000032 ORTHO05D009383 7.1e-09 66.2 63 50.8
ATR0824G065 Amborella trichopoda HOM05D000032 ORTHO05D009383 2.1e-08 64.7 70 45.7
EL10Ac9g22788 Beta vulgaris HOM05D000032 ORTHO05D009383 2.1e-08 64.7 111 37.8
Migut.A00966 Erythranthe guttata HOM05D007638 ORTHO05D009805 2.7e-08 64.3 63 54.0
Gohir.D10G081800 Gossypium hirsutum HOM05D000032 ORTHO05D009383 2.7e-08 64.3 71 46.5
SHI50144 Sapria himalayana HOM05D000032 ORTHO05D009383 2.7e-08 64.3 49 53.1
Gorai.011G088700 Gossypium raimondii HOM05D000032 ORTHO05D009383 3.5e-08 63.9 71 46.5
Gohir.A10G069700 Gossypium hirsutum HOM05D000032 ORTHO05D009383 4.6e-08 63.5 71 45.1
SMO201G0222 Selaginella moellendorffii HOM05D000032 ORTHO05D009383 1.3e-07 62.0 51 54.9
Haze_14989 Corylus avellana HOM05D000032 ORTHO05D009383 5.6e-06 56.6 49 55.1


User provided reference genes

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