Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012684 Carpinus fangiana HOM05D004377 ORTHO05D005168 1.3e-154 549.7 282 100.0
CiPaw.12G050900 Carya illinoinensis HOM05D004377 ORTHO05D005168 5.4e-148 527.7 282 94.0
Duzib205G1290 Durio zibethinus HOM05D004377 ORTHO05D005168 1.9e-145 519.2 282 91.5
Thecc.03G248500 Theobroma cacao HOM05D004377 ORTHO05D005168 1.6e-144 516.2 282 91.1
COL.COLO4_37134 Corchorus olitorius HOM05D004377 ORTHO05D005168 8.1e-144 513.8 282 90.1
RcHm_v2.0_Chr7g0203831 Rosa chinensis HOM05D004377 ORTHO05D005168 1.8e-143 512.7 282 91.8
Atru.chr9.1283 Acer truncatum HOM05D004377 ORTHO05D005168 4.0e-143 511.5 280 89.6
Dinv39164 Davidia involucrata HOM05D004377 ORTHO05D005168 4.0e-143 511.5 280 90.0
FAN13G0320 Fragaria x ananassa HOM05D004377 ORTHO05D005168 4.0e-143 511.5 282 91.1
Manes.02G041200 Manihot esculenta HOM05D004377 ORTHO05D005168 4.0e-143 511.5 282 90.8
CSS0001039 Camellia sinensis var. sinensis HOM05D004377 ORTHO05D005168 5.3e-143 511.1 282 90.1
Ciclev10021569m.g Citrus clementina HOM05D004377 ORTHO05D005168 5.3e-143 511.1 282 88.7
FAN18G3774 Fragaria x ananassa HOM05D004377 ORTHO05D005168 9.0e-143 510.4 282 91.1
FAN04G2360 Fragaria x ananassa HOM05D004377 ORTHO05D005168 4.5e-142 508.1 282 90.8
Eucgr.D02097 Eucalyptus grandis HOM05D004377 ORTHO05D005168 2.9e-141 505.4 282 88.7
PGR031G0408 Punica granatum HOM05D004377 ORTHO05D005168 2.9e-141 505.4 282 89.7
Gohir.D12G218200 Gossypium hirsutum HOM05D004377 ORTHO05D005168 4.9e-141 504.6 282 88.3
Gorai.008G233800 Gossypium raimondii HOM05D004377 ORTHO05D005168 4.9e-141 504.6 282 88.3
TWI81G0568 Tripterygium wilfordii HOM05D004377 ORTHO05D005168 1.9e-140 502.7 282 88.7
Glyma.17G143400 Glycine max HOM05D004377 ORTHO05D005168 2.4e-140 502.3 282 88.7
Gohir.A12G215600 Gossypium hirsutum HOM05D004377 ORTHO05D005168 3.2e-140 501.9 282 87.2
Hma1.2p1_0316F.1_g122900 Hydrangea macrophylla HOM05D004377 ORTHO05D005168 3.2e-140 501.9 282 87.9
CANSAT21G0788 Cannabis sativa HOM05D004377 ORTHO05D005168 7.9e-139 497.3 282 89.7
Dinv21652 Davidia involucrata HOM05D004377 ORTHO05D005168 3.0e-138 495.4 282 87.6
Lalb_Chr16g0386801 Lupinus albus HOM05D004377 ORTHO05D005168 3.9e-138 495.0 282 85.8
MD06G1053000 Malus domestica HOM05D004377 ORTHO05D005168 3.9e-138 495.0 282 86.9
Glyma.05G061700 Glycine max HOM05D004377 ORTHO05D005168 5.1e-138 494.6 282 87.2
Phvul.003G222200 Phaseolus vulgaris HOM05D004377 ORTHO05D005168 6.7e-138 494.2 282 86.9
CsaV3_5G004410 Cucumis sativus L. HOM05D004377 ORTHO05D005168 1.5e-137 493.0 282 85.5
VMungo0251G2239 Vigna mungo HOM05D004377 ORTHO05D005168 1.9e-137 492.7 281 86.8
MELO3C005517.2 Cucumis melo HOM05D004377 ORTHO05D005168 3.3e-137 491.9 282 85.1
Potri.001G155900 Populus trichocarpa HOM05D004377 ORTHO05D005168 7.4e-137 490.7 282 87.2
Prupe.5G065700 Prunus persica HOM05D004377 ORTHO05D005168 9.6e-137 490.3 282 86.5
arahy.Tifrunner.gnm1.ann1.XFA1VC Arachis hypogaea HOM05D004377 ORTHO05D005168 1.3e-136 490.0 281 86.8
Psat4g072760 Pisum sativum HOM05D004377 ORTHO05D005168 4.8e-136 488.0 282 85.8
Sed0026125 Sechium edule HOM05D004377 ORTHO05D005168 4.8e-136 488.0 282 85.1
Gohir.A11G027200 Gossypium hirsutum HOM05D004377 ORTHO05D005168 6.2e-136 487.6 282 85.8
Lj4g0001332 Lotus japonicus HOM05D004377 ORTHO05D005168 8.1e-136 487.3 282 85.1
Potri.003G078900 Populus trichocarpa HOM05D004377 ORTHO05D005168 1.4e-135 486.5 282 87.2
CAN.G1227.21 Capsicum annuum HOM05D004377 ORTHO05D005168 1.8e-135 486.1 282 85.1
MD04G1059900 Malus domestica HOM05D004377 ORTHO05D005168 9.0e-135 483.8 282 85.8
Solyc08g007320.3 Solanum lycopersicum HOM05D004377 ORTHO05D005168 9.0e-135 483.8 282 84.8
Haze_07947 Corylus avellana HOM05D004377 ORTHO05D005168 1.2e-134 483.4 285 90.2
Medtr4g100740 Medicago truncatula HOM05D004377 ORTHO05D005168 2.0e-134 482.6 282 85.8
Lj4g0011374 Lotus japonicus HOM05D004377 ORTHO05D005168 2.6e-134 482.3 282 84.4
ClCG01G004220 Citrullus lanatus HOM05D004377 ORTHO05D005168 3.4e-134 481.9 293 81.6
Actinidia10840 Actinidia chinensis HOM05D004377 ORTHO05D005168 5.8e-134 481.1 284 85.6
FAN08G2251 Fragaria x ananassa HOM05D004377 ORTHO05D005168 5.8e-134 481.1 277 87.7
Ca_21977_v3 Cicer arietinum L. HOM05D004377 ORTHO05D005168 7.6e-134 480.7 282 85.1
Lalb_Chr05g0221171 Lupinus albus HOM05D004377 ORTHO05D005168 7.6e-134 480.7 282 84.0
CSS0042619 Camellia sinensis var. sinensis HOM05D004377 ORTHO05D005168 2.2e-133 479.2 269 87.0
Sed0028099 Sechium edule HOM05D004377 ORTHO05D005168 2.2e-133 479.2 282 83.7
Migut.A01127 Erythranthe guttata HOM05D004377 ORTHO05D005168 2.9e-133 478.8 282 84.4
Actinidia02148 Actinidia chinensis HOM05D004377 ORTHO05D005168 4.9e-133 478.0 282 84.0
Cc08_g12200 Coffea canephora HOM05D004377 ORTHO05D005168 4.9e-133 478.0 282 82.3
TPR.G37661 Trifolium pratense HOM05D004377 ORTHO05D005168 6.5e-133 477.6 282 84.8
Nn4g26339 Nelumbo nucifera HOM05D004377 ORTHO05D005168 1.4e-132 476.5 282 83.3
Peaxi162Scf00102g00106 Petunia axillaris HOM05D004377 ORTHO05D005168 1.4e-132 476.5 282 82.6
Nn1g02340 Nelumbo nucifera HOM05D004377 ORTHO05D005168 7.1e-132 474.2 282 81.9
TAR375G0521 Trochodendron aralioides HOM05D004377 ORTHO05D005168 7.1e-132 474.2 286 82.2
MSTRG.12119 Avicennia marina HOM05D004377 ORTHO05D005168 9.3e-132 473.8 282 81.9
DCAR_008505 Daucus carota HOM05D004377 ORTHO05D005168 4.6e-131 471.5 282 83.7
Lsat_1_v5_gn_6_92481 Lactuca sativa HOM05D004377 ORTHO05D005168 1.9e-129 466.1 282 81.6
GSVIVG01006273001 Vitis vinifera HOM05D004377 ORTHO05D005168 3.3e-129 465.3 266 88.3
HanXRQChr03g0088831 Helianthus annuus HOM05D004377 ORTHO05D005168 4.3e-129 464.9 282 81.6
Rhsim07G0110500 Rhododendron simsii HOM05D004377 ORTHO05D005168 5.7e-129 464.5 290 81.4
Aqoxy5G00459 Aquilegia oxysepala HOM05D004377 ORTHO05D005168 1.6e-128 463.0 282 79.8
ECA240G2341 Erigeron canadensis HOM05D004377 ORTHO05D005168 1.6e-128 463.0 282 81.6
arahy.Tifrunner.gnm1.ann1.E2A47G Arachis hypogaea HOM05D004377 ORTHO05D005168 2.8e-128 462.2 341 71.8
THA.LOC104798366 Tarenaya hassleriana HOM05D004377 ORTHO05D005168 8.2e-128 460.7 283 82.7
arahy.Tifrunner.gnm1.ann1.ID9RWP Arachis hypogaea HOM05D004377 ORTHO05D005168 1.4e-127 459.9 282 83.3
vmacro00002 Vaccinium macrocarpon HOM05D004377 ORTHO05D005168 1.8e-127 459.5 316 74.7
Gohir.D11G026400 Gossypium hirsutum HOM05D004377 ORTHO05D005168 3.1e-127 458.8 282 82.6
Nitab4.5_0002225g0040 Nicotiana tabacum HOM05D004377 ORTHO05D005168 3.1e-127 458.8 288 80.6
PSO832G1836 Papaver somniferum HOM05D004377 ORTHO05D005168 5.8e-126 454.5 282 78.4
AUR62007109 Chenopodium quinoa HOM05D004377 ORTHO05D005168 7.6e-126 454.1 283 79.9
Ah.12g054290 Amaranthus hybridus HOM05D004377 ORTHO05D005168 1.0e-125 453.8 278 79.1
Lj8A268T28 Lonicera japonica HOM05D004377 ORTHO05D005168 2.9e-125 452.2 266 82.7
PSO210G5659 Papaver somniferum HOM05D004377 ORTHO05D005168 6.5e-125 451.1 282 77.7
Sabra03G0049000 Salix brachista HOM05D004377 ORTHO05D005168 8.4e-125 450.7 266 85.3
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 1.1e-124 450.3 283 80.2
Sp2g12120 Schrenkiella parvula HOM05D004377 ORTHO05D005168 2.5e-124 449.1 283 79.5
Lalb_Chr04g0253671 Lupinus albus HOM05D004377 ORTHO05D005168 4.2e-124 448.4 282 81.2
BraA02t08132Z Brassica rapa HOM05D004377 ORTHO05D005168 1.2e-123 446.8 281 79.0
CARHR173960 Cardamine hirsuta HOM05D004377 ORTHO05D005168 2.1e-123 446.0 283 79.2
ATR0697G021 Amborella trichopoda HOM05D004377 ORTHO05D005168 2.7e-123 445.7 282 77.7
Thhalv10000986m.g Eutrema salsugineum HOM05D004377 ORTHO05D005168 2.7e-123 445.7 283 78.8
HanXRQChr17g0549351 Helianthus annuus HOM05D004377 ORTHO05D005168 2.7e-123 445.7 282 78.4
Duzib068G0502 Durio zibethinus HOM05D004377 ORTHO05D005168 4.6e-123 444.9 282 81.2
Carub.0008s0037 Capsella rubella HOM05D004377 ORTHO05D005168 7.9e-123 444.1 283 80.2
Sabra01G0125600 Salix brachista HOM05D004377 ORTHO05D005168 1.0e-122 443.7 295 78.3
CARHR224020 Cardamine hirsuta HOM05D004377 ORTHO05D005168 1.3e-122 443.4 286 79.4
AT4G17420 Arabidopsis thaliana HOM05D004377 ORTHO05D005168 3.0e-122 442.2 286 79.4
AL7G37300 Arabidopsis lyrata HOM05D004377 ORTHO05D005168 8.7e-122 440.7 286 79.4
Carub.0007s2400 Capsella rubella HOM05D004377 ORTHO05D005168 8.7e-122 440.7 286 79.0
AL8G10630 Arabidopsis lyrata HOM05D004377 ORTHO05D005168 1.1e-121 440.3 283 78.4
AT5G47420 Arabidopsis thaliana HOM05D004377 ORTHO05D005168 1.9e-121 439.5 283 78.8
vmacro14068 Vaccinium macrocarpon HOM05D004377 ORTHO05D005168 1.9e-121 439.5 267 82.4
Nitab4.5_0000712g0120 Nicotiana tabacum HOM05D004377 ORTHO05D005168 2.5e-121 439.1 279 78.9
DCAR_006841 Daucus carota HOM05D004377 ORTHO05D005168 3.3e-121 438.7 266 82.0
Sc07g0009230 Simmondsia chinensis HOM05D004377 ORTHO05D005168 3.3e-121 438.7 266 80.1
Thhalv10025916m.g Eutrema salsugineum HOM05D004377 ORTHO05D005168 1.6e-120 436.4 286 77.6
RcHm_v2.0_Chr7g0203871 Rosa chinensis HOM05D004377 ORTHO05D005168 2.2e-120 436.0 282 80.9
SGA_v2.0_scaffold199G41183 Striga asiatica HOM05D004377 ORTHO05D005168 3.7e-120 435.3 313 72.2
A01p19930 Brassica napus HOM05D004377 ORTHO05D005168 6.3e-120 434.5 286 78.3
Sp7g16770 Schrenkiella parvula HOM05D004377 ORTHO05D005168 8.2e-120 434.1 286 76.9
CDE02G4267 Ceratophyllum demersum HOM05D004377 ORTHO05D005168 1.1e-119 433.7 286 75.2
TAR629G1293 Trochodendron aralioides HOM05D004377 ORTHO05D005168 1.1e-119 433.7 282 77.3
BcaNung00095 Brassica carinata HOM05D004377 ORTHO05D005168 1.4e-119 433.3 286 78.0
A01p19950 Brassica napus HOM05D004377 ORTHO05D005168 1.4e-119 433.3 286 78.3
BraA01t01921Z Brassica rapa HOM05D004377 ORTHO05D005168 1.4e-119 433.3 286 78.0
Cpa.g.sc29.192 Carica papaya HOM05D004377 ORTHO05D005168 1.8e-119 433.0 240 87.5
BcaC09g50474 Brassica carinata HOM05D004377 ORTHO05D005168 2.4e-119 432.6 286 78.0
C01p25030 Brassica napus HOM05D004377 ORTHO05D005168 3.4e-118 428.7 286 77.3
BolC2t10957H Brassica oleracea HOM05D004377 ORTHO05D005168 7.7e-118 427.6 281 76.5
A02p31280 Brassica napus HOM05D004377 ORTHO05D005168 2.2e-117 426.0 325 68.0
HPP92_007932 Vanilla planifolia HOM05D004377 ORTHO05D005168 1.4e-116 423.3 282 73.0
HPP92_007952 Vanilla planifolia HOM05D004377 ORTHO05D005168 1.4e-116 423.3 282 73.0
AUR62019971 Chenopodium quinoa HOM05D004377 ORTHO05D005168 4.2e-116 421.8 283 75.3
CDE05G2427 Ceratophyllum demersum HOM05D004377 ORTHO05D005168 7.2e-116 421.0 286 73.1
BolC1t02447H Brassica oleracea HOM05D004377 ORTHO05D005168 1.6e-115 419.9 276 77.5
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 1.4e-114 416.8 272 78.3
SEGI_38141 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 2.5e-113 412.5 281 73.0
Gorai.007G028700 Gossypium raimondii HOM05D004377 ORTHO05D005168 3.7e-112 408.7 282 77.3
BcaC03g16958 Brassica carinata HOM05D004377 ORTHO05D005168 1.1e-111 407.1 282 75.2
C02p48650 Brassica napus HOM05D004377 ORTHO05D005168 1.1e-111 407.1 282 75.2
MBI09_g26154_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 1.4e-111 406.8 306 68.3
unitig_736.g22277 Utricularia gibba HOM05D004377 ORTHO05D005168 1.4e-111 406.8 247 81.0
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 2.2e-109 399.4 272 76.1
Lsat_1_v5_gn_3_1221 Lactuca sativa HOM05D004377 ORTHO05D005168 3.8e-109 398.7 287 71.1
BcaC06g34254 Brassica carinata HOM05D003894 ORTHO05D004584 2.1e-107 392.9 250 78.8
FvH4_5g19370 Fragaria vesca HOM05D004377 ORTHO05D005168 4.7e-107 391.7 213 91.1
Sopen08g003260 Solanum pennellii HOM05D004377 ORTHO05D005168 3.0e-106 389.0 231 82.7
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 8.8e-106 387.5 276 74.3
arahy.Tifrunner.gnm1.ann1.CS1SDE Arachis hypogaea HOM05D004377 ORTHO05D005168 9.7e-105 384.0 341 63.3
MBI08_g41738_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 2.8e-104 382.5 266 69.9
Os03g0747300 Oryza sativa ssp. japonica HOM05D004377 ORTHO05D005168 1.1e-103 380.6 283 66.4
EL10Ac5g12360 Beta vulgaris HOM05D004377 ORTHO05D005168 2.4e-103 379.4 283 69.3
RcHm_v2.0_Chr2g0120481 Rosa chinensis HOM05D004377 ORTHO05D005168 7.0e-103 377.9 223 84.8
Actinidia14411 Actinidia chinensis HOM05D004377 ORTHO05D005168 1.5e-100 370.2 258 76.4
SGA_v2.0_scaffold199G41214 Striga asiatica HOM05D004377 ORTHO05D005168 2.7e-99 365.9 213 83.6
Nitab4.5_0000618g0130 Nicotiana tabacum HOM05D004377 ORTHO05D005168 3.6e-99 365.5 279 68.1
SHI09598 Sapria himalayana HOM05D004377 ORTHO05D005168 4.2e-92 342.0 267 64.8
BcaC06g34256 Brassica carinata HOM05D004377 ORTHO05D005168 3.7e-88 328.9 249 71.5
SMO356G0134 Selaginella moellendorffii HOM05D004377 ORTHO05D005168 2.6e-81 306.2 284 58.1
BcaC06g31391 Brassica carinata HOM05D004377 ORTHO05D005168 1.8e-79 300.1 281 60.5
Oeu027011.1 Olea europaea HOM05D004377 ORTHO05D005168 2.0e-78 296.6 239 66.1
Zm00001eb057110 Zea mays HOM05D004377 ORTHO05D005168 1.8e-74 283.5 213 63.8
FAN15G2264 Fragaria x ananassa HOM05D004377 ORTHO05D005168 1.2e-59 234.2 282 54.3
FAN27G2545 Fragaria x ananassa HOM05D004377 ORTHO05D005168 5.2e-58 228.8 328 48.2
AagrBONN_evm.TU.Sc2ySwM_362.367 Anthoceros agrestis HOM05D004377 ORTHO05D005168 2.7e-54 216.5 173 61.8
Mapoly0006s0223 Marchantia polymorpha HOM05D004377 ORTHO05D005168 4.6e-54 215.7 172 62.8
Hund14575 Selenicereus undatus HOM05D004377 ORTHO05D005168 8.6e-53 211.5 172 62.8
Actinidia31514 Actinidia chinensis HOM05D004377 ORTHO05D005168 2.5e-52 209.9 211 61.6
Oeu012199.1 Olea europaea HOM05D004377 ORTHO05D005168 3.1e-50 203.0 120 79.2
Aa31LG6G160 Aethionema arabicum HOM05D004377 ORTHO05D005168 6.4e-48 195.3 269 46.5
TAR374G0316 Trochodendron aralioides HOM05D004377 ORTHO05D005168 2.1e-43 180.3 122 71.3
MBI09_g24445_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 1.4e-42 177.6 180 54.4
FAN24G1967 Fragaria x ananassa HOM05D004377 ORTHO05D005168 7.6e-33 145.2 301 40.9
FvH4_2g20120 Fragaria vesca HOM05D004377 ORTHO05D005168 2.1e-30 137.1 277 40.8
GSVIVG01015047001 Vitis vinifera HOM05D004377 ORTHO05D005168 3.0e-29 133.3 85 70.6
SEGI_12924 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 6.9e-26 122.1 120 54.2
MCO15G334 Micromonas commoda HOM05D004377 ORTHO05D005168 2.0e-25 120.6 223 34.5
MBI09_g42042_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 9.9e-25 118.2 175 44.6
Nitab4.5_0002372g0030 Nicotiana tabacum HOM05D004377 ORTHO05D005168 2.4e-23 113.6 66 87.9
SEGI_18353 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 3.5e-22 109.8 94 60.6
Nitab4.5_0001410g0090 Nicotiana tabacum HOM05D004152 ORTHO05D004878 1.5e-20 104.4 118 50.8
Actinidia31513 Actinidia chinensis HOM05D004377 ORTHO05D005168 6.5e-16 89.0 52 86.5
Nitab4.5_0002881g0130 Nicotiana tabacum HOM05D004152 ORTHO05D004878 7.9e-14 82.0 47 87.2
SEGI_16571 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 6.5e-08 62.4 49 65.3
CBR_g928 Chara braunii HOM05D015229 ORTHO05D017822 4.6e-06 56.2 170 28.2


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