Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012670 Carpinus fangiana HOM05D000584 ORTHO05D000458 3.1e-23 110.9 55 100.0
Manes.01G087200 Manihot esculenta HOM05D000584 ORTHO05D000458 1.9e-09 65.1 44 72.7
Atru.chr9.1226 Acer truncatum HOM05D000584 ORTHO05D000458 4.1e-07 57.4 85 43.5
CiPaw.12G047400 Carya illinoinensis HOM05D000584 ORTHO05D000458 6.9e-07 56.6 88 40.9
Gohir.A09G196900 Gossypium hirsutum HOM05D000584 ORTHO05D000458 6.9e-07 56.6 79 43.0
Gohir.D09G191500 Gossypium hirsutum HOM05D000584 ORTHO05D000458 6.9e-07 56.6 79 43.0
Gorai.006G214300 Gossypium raimondii HOM05D000584 ORTHO05D000458 6.9e-07 56.6 79 43.0
Prupe.5G058700 Prunus persica HOM05D000584 ORTHO05D000458 6.9e-07 56.6 86 41.9
TAR375G0925 Trochodendron aralioides HOM05D000584 ORTHO05D000458 6.9e-07 56.6 27 88.9
CSS0023310 Camellia sinensis var. sinensis HOM05D000584 ORTHO05D000458 9.0e-07 56.2 39 71.8
Nn6g33793 Nelumbo nucifera HOM05D000584 ORTHO05D000458 1.2e-06 55.8 38 68.4
AL8G10850 Arabidopsis lyrata HOM05D000584 ORTHO05D000458 1.5e-06 55.5 27 88.9
AT5G47180 Arabidopsis thaliana HOM05D000584 ORTHO05D000458 1.5e-06 55.5 27 88.9
Carub.0008s0056 Capsella rubella HOM05D000584 ORTHO05D000458 1.5e-06 55.5 27 88.9
CARHR174180 Cardamine hirsuta HOM05D000584 ORTHO05D000458 1.5e-06 55.5 27 88.9
Thhalv10001019m.g Eutrema salsugineum HOM05D000584 ORTHO05D000458 1.5e-06 55.5 27 88.9
FvH4_5g20180 Fragaria vesca HOM05D000584 ORTHO05D000458 1.5e-06 55.5 27 85.2
FAN04G1097 Fragaria x ananassa HOM05D000584 ORTHO05D000458 1.5e-06 55.5 27 85.2
FAN08G0803 Fragaria x ananassa HOM05D000584 ORTHO05D000458 1.5e-06 55.5 27 85.2
FAN18G0850 Fragaria x ananassa HOM05D000584 ORTHO05D000458 1.5e-06 55.5 27 85.2
Sp2g11980 Schrenkiella parvula HOM05D000584 ORTHO05D000458 1.5e-06 55.5 27 88.9
THA.LOC104812814 Tarenaya hassleriana HOM05D000584 ORTHO05D000458 1.5e-06 55.5 27 88.9
BcaC06g31410 Brassica carinata HOM05D000584 ORTHO05D000458 2.0e-06 55.1 27 85.2
Duzib084G0648 Durio zibethinus HOM05D000584 ORTHO05D000458 2.0e-06 55.1 86 40.7
Gorai.004G193700 Gossypium raimondii HOM05D000584 ORTHO05D000458 2.0e-06 55.1 86 40.7
Nn1g00811 Nelumbo nucifera HOM05D000584 ORTHO05D000458 2.0e-06 55.1 38 68.4
THA.LOC104806680 Tarenaya hassleriana HOM05D000584 ORTHO05D000458 2.0e-06 55.1 27 88.9
Ciclev10022085m.g Citrus clementina HOM05D000584 ORTHO05D000458 2.6e-06 54.7 86 41.9
Duzib068G0052 Durio zibethinus HOM05D000584 ORTHO05D000458 2.6e-06 54.7 87 40.2
Gohir.A08G165600 Gossypium hirsutum HOM05D000584 ORTHO05D000458 2.6e-06 54.7 86 39.5
Aa31sc198G30 Aethionema arabicum HOM05D000584 ORTHO05D000458 3.4e-06 54.3 27 85.2
BcaC03g16948 Brassica carinata HOM05D000584 ORTHO05D000458 3.4e-06 54.3 27 85.2
A02p30920 Brassica napus HOM05D000584 ORTHO05D000458 3.4e-06 54.3 27 85.2
C02p48530 Brassica napus HOM05D000584 ORTHO05D000458 3.4e-06 54.3 27 85.2
BolC2t10885H Brassica oleracea HOM05D000584 ORTHO05D000458 3.4e-06 54.3 27 85.2
BraA02t08104Z Brassica rapa HOM05D000584 ORTHO05D000458 3.4e-06 54.3 27 85.2
MELO3C013905.2 Cucumis melo HOM05D000584 ORTHO05D000458 3.4e-06 54.3 38 71.1
MD06G1048500 Malus domestica HOM05D000584 ORTHO05D000458 3.4e-06 54.3 27 85.2
QL12p009073 Quercus lobata HOM05D000584 ORTHO05D000458 3.4e-06 54.3 38 68.4
Dinv28864 Davidia involucrata HOM05D000584 ORTHO05D000458 4.5e-06 53.9 31 80.6
Lj8A275T72 Lonicera japonica HOM05D000584 ORTHO05D000458 4.5e-06 53.9 84 41.7
PSO063G4473 Papaver somniferum HOM05D000584 ORTHO05D000458 4.5e-06 53.9 27 85.2
BcaB07g30789 Brassica carinata HOM05D000584 ORTHO05D000458 5.9e-06 53.5 27 85.2
BcaC06g34279 Brassica carinata HOM05D000584 ORTHO05D000458 5.9e-06 53.5 27 81.5
A06p45230 Brassica napus HOM05D000584 ORTHO05D000458 5.9e-06 53.5 27 81.5
A09p22900 Brassica napus HOM05D000584 ORTHO05D000458 5.9e-06 53.5 27 85.2
C07p30870 Brassica napus HOM05D000584 ORTHO05D000458 5.9e-06 53.5 27 81.5
BolC7t43628H Brassica oleracea HOM05D000584 ORTHO05D000458 5.9e-06 53.5 27 81.5
BraA06t27393Z Brassica rapa HOM05D000584 ORTHO05D000458 5.9e-06 53.5 27 81.5
BraA09t37891Z Brassica rapa HOM05D000584 ORTHO05D000458 5.9e-06 53.5 27 85.2
FAN13G2958 Fragaria x ananassa HOM05D000584 ORTHO05D000458 5.9e-06 53.5 27 81.5
SGA_v2.0_scaffold6G03138 Striga asiatica HOM05D000584 ORTHO05D000458 5.9e-06 53.5 79 41.8
TWI60G0611 Tripterygium wilfordii HOM05D000584 ORTHO05D000458 5.9e-06 53.5 38 63.2
Aqoxy3G02696 Aquilegia oxysepala HOM05D000584 ORTHO05D000458 7.7e-06 53.1 27 85.2
CANSAT21G0412 Cannabis sativa HOM05D000584 ORTHO05D000458 7.7e-06 53.1 27 85.2
Haze_07977 Corylus avellana HOM05D000584 ORTHO05D000458 7.7e-06 53.1 55 58.2
CsaV3_3G002350 Cucumis sativus L. HOM05D000584 ORTHO05D000458 7.7e-06 53.1 38 68.4
Dinv21691 Davidia involucrata HOM05D000584 ORTHO05D000458 7.7e-06 53.1 38 68.4
MD04G1051600 Malus domestica HOM05D000584 ORTHO05D000458 7.7e-06 53.1 86 39.5
RcHm_v2.0_Chr7g0205261 Rosa chinensis HOM05D000584 ORTHO05D000458 7.7e-06 53.1 70 44.3
Sed0005551 Sechium edule HOM05D000584 ORTHO05D000458 1.0e-05 52.8 26 88.5
Sed0027273 Sechium edule HOM05D000584 ORTHO05D000458 1.0e-05 52.8 26 88.5


User provided reference genes

Program Settings