Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 1.3e-181 639.8 387 100.0
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 1.3e-163 580.1 387 93.5
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 1.1e-114 417.5 335 73.7
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 2.5e-95 353.2 288 67.7
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 2.1e-94 350.1 280 69.6
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 2.2e-91 340.1 274 68.6
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 2.2e-91 340.1 289 67.8
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 1.9e-90 337.0 291 64.9
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 7.1e-90 335.1 292 63.7
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 9.3e-90 334.7 500 45.6
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 9.3e-90 334.7 291 64.9
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 1.2e-89 334.3 302 63.2
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 3.0e-88 329.7 297 62.6
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 2.1e-86 323.6 287 62.7
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 8.1e-86 321.6 343 56.0
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 1.8e-85 320.5 295 63.1
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 2.4e-85 320.1 293 64.5
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 1.2e-84 317.8 291 61.9
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 1.5e-84 317.4 296 61.8
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 1.5e-84 317.4 290 63.1
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 9.9e-84 314.7 284 62.3
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 9.9e-84 314.7 288 61.5
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 1.7e-83 313.9 289 61.6
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 8.4e-83 311.6 291 61.5
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 3.2e-82 309.7 287 63.4
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 5.4e-82 308.9 333 60.1
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 7.1e-82 308.5 292 60.6
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 4.6e-81 305.8 274 62.8
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 4.6e-81 305.8 293 59.7
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 1.0e-80 304.7 317 57.1
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 1.3e-80 304.3 290 61.0
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.8e-80 303.9 274 62.4
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 3.0e-80 303.1 301 60.8
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 3.0e-80 303.1 308 58.8
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.5e-79 300.8 303 58.4
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 2.5e-79 300.1 311 57.9
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 2.8e-78 296.6 311 58.2
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 8.1e-78 295.0 297 58.9
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 1.1e-77 294.7 306 57.5
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 3.1e-77 293.1 303 57.8
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 4.0e-77 292.7 298 59.1
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 6.9e-77 292.0 274 60.9
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 6.9e-77 292.0 264 62.5
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 9.0e-77 291.6 288 59.4
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 9.0e-77 291.6 277 63.5
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 1.5e-76 290.8 274 62.0
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 2.0e-76 290.4 291 60.5
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 3.4e-76 289.7 273 62.6
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 3.4e-76 289.7 296 57.4
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 2.9e-75 286.6 292 58.2
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 2.9e-75 286.6 270 62.2
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 3.8e-75 286.2 291 58.8
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 4.9e-75 285.8 270 60.4
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 4.9e-75 285.8 280 61.4
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 6.4e-75 285.4 296 57.4
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 6.4e-75 285.4 289 57.4
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 1.1e-74 284.6 277 59.2
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 1.1e-74 284.6 291 57.0
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 4.2e-74 282.7 270 61.9
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 5.5e-74 282.3 274 60.2
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 9.3e-74 281.6 267 64.0
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 9.3e-74 281.6 283 59.4
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 1.2e-73 281.2 282 58.9
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 2.1e-73 280.4 312 55.1
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 3.5e-73 279.6 289 55.4
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 6.0e-73 278.9 298 57.0
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 7.9e-73 278.5 258 61.6
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 3.9e-72 276.2 296 56.8
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 3.9e-72 276.2 292 55.1
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 6.7e-72 275.4 298 53.7
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 6.7e-72 275.4 285 54.4
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 8.7e-72 275.0 294 55.1
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 1.9e-71 273.9 291 55.0
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 2.1e-70 270.4 281 56.9
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 2.1e-70 270.4 281 58.7
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 6.2e-70 268.9 286 54.9
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 1.1e-69 268.1 230 64.3
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 1.8e-69 267.3 292 55.5
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 1.8e-69 267.3 298 56.0
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 5.8e-68 262.3 296 53.7
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 1.4e-66 257.7 278 55.0
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 9.3e-66 255.0 279 53.8
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 3.5e-65 253.1 255 57.6
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 6.0e-65 252.3 276 55.1
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 6.0e-65 252.3 203 67.0
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 1.8e-64 250.8 275 54.9
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 1.5e-63 247.7 281 54.4
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 2.5e-63 246.9 258 55.4
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 3.3e-63 246.5 289 54.0
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 3.3e-63 246.5 159 79.9
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 3.3e-63 246.5 331 46.8
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 6.9e-61 238.8 272 52.9
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 4.5e-60 236.1 285 52.3
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 1.0e-59 235.0 287 51.2
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 5.5e-58 229.2 344 45.1
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 7.2e-58 228.8 284 50.4
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 7.2e-58 228.8 234 56.0
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 1.8e-56 224.2 347 43.8
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 3.0e-56 223.4 237 55.7
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 3.3e-55 219.9 297 48.8
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 9.7e-55 218.4 180 67.8
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 1.1e-53 214.9 293 48.1
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 3.4e-52 209.9 261 50.2
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 5.9e-52 209.1 282 46.8
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 1.9e-50 204.1 281 45.2
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 2.5e-50 203.8 280 45.7
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 7.9e-49 198.7 204 57.4
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 1.8e-45 187.6 227 47.1
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 1.1e-39 168.3 218 49.5
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 9.1e-37 158.7 244 39.3
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 2.6e-31 140.6 263 39.2
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 1.1e-29 135.2 299 37.5
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 9.1e-29 132.1 181 44.8
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 9.4e-26 122.1 95 69.5
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 2.7e-25 120.6 207 41.1
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 2.2e-22 110.9 275 33.8
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 4.1e-21 106.7 76 72.4
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 4.2e-18 96.7 107 51.4
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 1.8e-16 91.3 294 32.7
BolC4t27428H Brassica oleracea HOM05D006271 ORTHO05D023853 3.2e-13 80.5 203 39.4
C04p59170 Brassica napus HOM05D006271 ORTHO05D023853 2.0e-12 77.8 203 39.4
PSO170G2099 Papaver somniferum HOM05D006271 ORTHO05D008237 2.9e-11 73.9 222 30.2
PSO017G3993 Papaver somniferum HOM05D006271 ORTHO05D008237 1.6e-09 68.2 209 30.6


User provided reference genes

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