Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa011331 Carpinus fangiana HOM05D005643 ORTHO05D006819 5.8e-141 504.2 254 100.0
Prupe.6G100100 Prunus persica HOM05D005643 ORTHO05D006819 7.4e-120 434.1 254 86.2
CiPaw.13G111900 Carya illinoinensis HOM05D005643 ORTHO05D006819 9.0e-118 427.2 254 86.6
QL01p022418 Quercus lobata HOM05D005643 ORTHO05D006819 1.5e-117 426.4 253 85.0
FvH4_3g32570 Fragaria vesca HOM05D005643 ORTHO05D006819 3.2e-115 418.7 252 84.5
FAN11G2689 Fragaria x ananassa HOM05D005643 ORTHO05D006819 7.9e-114 414.1 257 82.9
Ciclev10029093m.g Citrus clementina HOM05D005643 ORTHO05D006819 2.3e-113 412.5 259 79.9
arahy.Tifrunner.gnm1.ann1.X5NJ7E Arachis hypogaea HOM05D005643 ORTHO05D006819 3.9e-113 411.8 255 80.0
Atru.chr3.3643 Acer truncatum HOM05D005643 ORTHO05D006819 6.7e-113 411.0 253 82.2
Thecc.09G257100 Theobroma cacao HOM05D005643 ORTHO05D006819 8.7e-113 410.6 254 79.5
TAR633G1751 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.9e-112 409.5 251 79.3
TPR.G13337 Trifolium pratense HOM05D005643 ORTHO05D006819 5.7e-112 407.9 254 81.5
TWI75G1433 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 1.6e-111 406.4 254 78.3
Lalb_Chr19g0124481 Lupinus albus HOM05D005643 ORTHO05D006819 2.1e-111 406.0 254 79.1
Glyma.01G116100 Glycine max HOM05D005643 ORTHO05D006819 4.8e-111 404.8 259 77.6
Dinv32759 Davidia involucrata HOM05D005643 ORTHO05D006819 8.2e-111 404.1 251 80.9
Eucgr.B02489 Eucalyptus grandis HOM05D005643 ORTHO05D006819 1.1e-110 403.7 251 80.1
RcHm_v2.0_Chr5g0059641 Rosa chinensis HOM05D005643 ORTHO05D006819 1.8e-110 402.9 266 78.6
FAN21G1883 Fragaria x ananassa HOM05D005643 ORTHO05D006819 4.1e-110 401.7 270 78.1
Gohir.D05G076900 Gossypium hirsutum HOM05D005643 ORTHO05D006819 4.1e-110 401.7 254 78.0
Medtr4g015590 Medicago truncatula HOM05D005643 ORTHO05D006819 4.1e-110 401.7 254 80.7
Sabra09G0008500 Salix brachista HOM05D005643 ORTHO05D006819 5.3e-110 401.4 254 78.0
Gorai.009G078300 Gossypium raimondii HOM05D005643 ORTHO05D006819 1.2e-109 400.2 254 77.6
FAN16G3648 Fragaria x ananassa HOM05D005643 ORTHO05D006819 1.5e-109 399.8 257 80.9
Gohir.A05G074000 Gossypium hirsutum HOM05D005643 ORTHO05D006819 2.0e-109 399.4 254 77.6
TWI79G0673 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 2.0e-109 399.4 251 79.7
GSVIVG01025172001 Vitis vinifera HOM05D005643 ORTHO05D006819 2.0e-109 399.4 251 79.7
Potri.009G012700 Populus trichocarpa HOM05D005643 ORTHO05D006819 3.4e-109 398.7 255 78.8
Glyma.03G060100 Glycine max HOM05D005643 ORTHO05D006819 4.5e-109 398.3 255 77.3
Manes.04G022200 Manihot esculenta HOM05D005643 ORTHO05D006819 1.0e-108 397.1 251 79.3
Lj3g0018588 Lotus japonicus HOM05D005643 ORTHO05D006819 6.5e-108 394.4 253 77.5
Psat7g245880 Pisum sativum HOM05D005643 ORTHO05D006819 6.5e-108 394.4 256 80.1
Duzib170G0435 Durio zibethinus HOM05D005643 ORTHO05D006819 1.9e-107 392.9 252 77.8
Duzib170G0739 Durio zibethinus HOM05D005643 ORTHO05D006819 1.9e-107 392.9 252 77.8
Duzib150G0959 Durio zibethinus HOM05D005643 ORTHO05D006819 7.2e-107 391.0 254 76.8
Nn2g10757 Nelumbo nucifera HOM05D005643 ORTHO05D006819 1.6e-106 389.8 252 77.8
Rhsim13G0093700 Rhododendron simsii HOM05D005643 ORTHO05D006819 2.7e-106 389.0 251 78.9
Sed0015117 Sechium edule HOM05D005643 ORTHO05D006819 4.6e-106 388.3 252 79.8
MELO3C025766.2 Cucumis melo HOM05D005643 ORTHO05D006819 7.9e-106 387.5 252 79.0
MD11G1133800 Malus domestica HOM05D005643 ORTHO05D006819 7.9e-106 387.5 272 75.4
Phvul.010G001900 Phaseolus vulgaris HOM05D005643 ORTHO05D006819 2.3e-105 386.0 254 76.0
arahy.Tifrunner.gnm1.ann1.QSC7KM Arachis hypogaea HOM05D005643 ORTHO05D006819 1.1e-104 383.6 305 67.2
Oeu059095.1 Olea europaea HOM05D005643 ORTHO05D006819 4.3e-104 381.7 250 74.8
CAN.G1001.26 Capsicum annuum HOM05D005643 ORTHO05D006819 5.7e-104 381.3 252 75.4
Cc01_g11250 Coffea canephora HOM05D005643 ORTHO05D006819 5.7e-104 381.3 256 75.4
Migut.D02210 Erythranthe guttata HOM05D005643 ORTHO05D006819 5.7e-104 381.3 248 75.4
arahy.Tifrunner.gnm1.ann1.9U2L6D Arachis hypogaea HOM05D005643 ORTHO05D006819 7.4e-104 380.9 254 75.2
THA.LOC104814830 Tarenaya hassleriana HOM05D005643 ORTHO05D006819 7.4e-104 380.9 254 76.4
AL8G37130 Arabidopsis lyrata HOM05D005643 ORTHO05D006819 1.3e-103 380.2 256 74.6
Migut.D02214 Erythranthe guttata HOM05D005643 ORTHO05D006819 1.6e-103 379.8 248 75.0
AT5G60540 Arabidopsis thaliana HOM05D005643 ORTHO05D006819 2.2e-103 379.4 256 75.0
Carub.0008s2123 Capsella rubella HOM05D005643 ORTHO05D006819 6.3e-103 377.9 255 74.5
MSTRG.21131 Avicennia marina HOM05D005643 ORTHO05D006819 2.4e-102 375.9 250 75.2
Aqoxy1G03172 Aquilegia oxysepala HOM05D005643 ORTHO05D006819 1.2e-101 373.6 250 74.8
BcaB08g36348 Brassica carinata HOM05D005643 ORTHO05D006819 1.5e-101 373.2 255 74.1
A10p17720 Brassica napus HOM05D005643 ORTHO05D006819 1.5e-101 373.2 255 74.1
BraA10t43851Z Brassica rapa HOM05D005643 ORTHO05D006819 1.5e-101 373.2 255 74.1
Nitab4.5_0006757g0010 Nicotiana tabacum HOM05D005643 ORTHO05D006819 2.0e-101 372.9 252 72.2
PGR102G1730 Punica granatum HOM05D005643 ORTHO05D006819 2.0e-101 372.9 252 73.4
Aa31LG1G12530 Aethionema arabicum HOM05D005643 ORTHO05D006819 2.6e-101 372.5 254 74.0
C09p53180 Brassica napus HOM05D005643 ORTHO05D006819 2.6e-101 372.5 255 73.7
BolC9t58193H Brassica oleracea HOM05D005643 ORTHO05D006819 2.6e-101 372.5 255 73.7
CsaV3_6G013840 Cucumis sativus L. HOM05D005643 ORTHO05D006819 3.4e-101 372.1 252 77.0
Lj1A190T89 Lonicera japonica HOM05D005643 ORTHO05D006819 4.5e-101 371.7 253 75.1
Sp6g22110 Schrenkiella parvula HOM05D005643 ORTHO05D006819 1.7e-100 369.8 253 73.9
SalBow5G2340 Salvia bowleyana HOM05D005643 ORTHO05D006819 2.2e-100 369.4 251 73.7
ECA248G1947 Erigeron canadensis HOM05D005643 ORTHO05D006819 5.0e-100 368.2 255 73.3
Lalb_Chr03g0043331 Lupinus albus HOM05D005643 ORTHO05D006819 5.0e-100 368.2 238 75.2
CARHR274200 Cardamine hirsuta HOM05D005643 ORTHO05D006819 1.4e-99 366.7 254 72.4
Peaxi162Scf00270g00108 Petunia axillaris HOM05D005643 ORTHO05D006819 1.4e-99 366.7 252 73.4
Sc06g0010070 Simmondsia chinensis HOM05D005643 ORTHO05D006819 2.5e-99 365.9 250 70.0
PGSC0003DMG400008060 Solanum tuberosum HOM05D005643 ORTHO05D006819 2.5e-99 365.9 252 71.8
Solyc11g069290.2 Solanum lycopersicum HOM05D005643 ORTHO05D006819 4.2e-99 365.2 252 71.8
Sopen11g028020 Solanum pennellii HOM05D005643 ORTHO05D006819 5.5e-99 364.8 252 71.8
HanXRQChr01g0018371 Helianthus annuus HOM05D005643 ORTHO05D006819 7.2e-99 364.4 256 72.7
PSO339G3071 Papaver somniferum HOM05D005643 ORTHO05D006819 7.9e-98 360.9 252 71.4
PSO384G4957 Papaver somniferum HOM05D005643 ORTHO05D006819 1.0e-97 360.5 252 71.4
CAN.G631.16 Capsicum annuum HOM05D005643 ORTHO05D006819 1.4e-97 360.1 252 72.2
SGA_v2.0_scaffold97G29210 Striga asiatica HOM05D005643 ORTHO05D006819 1.4e-97 360.1 251 72.1
BolC2t07247H Brassica oleracea HOM05D005643 ORTHO05D006819 1.8e-97 359.8 254 72.0
DCAR_006056 Daucus carota HOM05D005643 ORTHO05D006819 6.7e-97 357.8 251 73.7
MD03G1113000 Malus domestica HOM05D005643 ORTHO05D006819 6.7e-97 357.8 247 75.7
VMungo0331G1810 Vigna mungo HOM05D005643 ORTHO05D006819 1.5e-96 356.7 238 74.4
Nitab4.5_0000650g0110 Nicotiana tabacum HOM05D005643 ORTHO05D006819 4.3e-96 355.1 275 65.8
ATR0115G033 Amborella trichopoda HOM05D005643 ORTHO05D006819 1.3e-95 353.6 252 71.4
EL10Ac9g22501 Beta vulgaris HOM05D005643 ORTHO05D006819 9.1e-94 347.4 261 67.8
AUR62024993 Chenopodium quinoa HOM05D005643 ORTHO05D006819 2.6e-93 345.9 259 67.6
Os02g0130100 Oryza sativa ssp. japonica HOM05D005643 ORTHO05D006819 5.9e-93 344.7 261 69.0
AUR62039626 Chenopodium quinoa HOM05D005643 ORTHO05D006819 7.7e-93 344.4 259 68.3
Thhalv10014160m.g Eutrema salsugineum HOM05D005643 ORTHO05D006819 1.0e-92 344.0 250 70.8
unitig_0.g1517 Utricularia gibba HOM05D005643 ORTHO05D006819 2.9e-92 342.4 249 69.5
MBI07_g41453_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 3.8e-92 342.0 238 73.1
HPP92_025849 Vanilla planifolia HOM05D005643 ORTHO05D006819 8.5e-92 340.9 250 67.6
Hma1.2p1_1030F.1_g249820 Hydrangea macrophylla HOM05D005643 ORTHO05D006819 7.9e-90 334.3 237 70.9
SEGI_15740 Sequoiadendron giganteum HOM05D005643 ORTHO05D006819 1.0e-89 334.0 250 64.8
BcaB08g36349 Brassica carinata HOM05D005643 ORTHO05D006819 1.8e-89 333.2 233 71.7
Lsat_1_v5_gn_1_65480 Lactuca sativa HOM05D005643 ORTHO05D006819 5.7e-88 328.2 254 67.3
AagrBONN_evm.TU.Sc2ySwM_117.2790 Anthoceros agrestis HOM05D005643 ORTHO05D006819 8.2e-87 324.3 253 64.8
Actinidia03737 Actinidia chinensis HOM05D005643 ORTHO05D006819 2.1e-82 309.7 204 77.0
CSS0039600 Camellia sinensis var. sinensis HOM05D005643 ORTHO05D006819 1.1e-80 303.9 255 65.5
Nn2g13073 Nelumbo nucifera HOM05D001952 ORTHO05D005047 5.7e-80 301.6 191 79.6
Actinidia24093 Actinidia chinensis HOM05D005643 ORTHO05D006819 7.5e-80 301.2 199 75.9
Pp3c19_5510 Physcomitrium patens HOM05D005643 ORTHO05D006819 3.7e-79 298.9 253 62.5
SMO364G0700 Selaginella moellendorffii HOM05D005643 ORTHO05D006819 3.7e-79 298.9 251 61.0
arahy.Tifrunner.gnm1.ann1.J7FTHV Arachis hypogaea HOM05D005643 ORTHO05D006819 1.6e-77 293.5 236 66.5
Mapoly0081s0077 Marchantia polymorpha HOM05D005643 ORTHO05D006819 2.0e-77 293.1 255 60.4
Ca_09130_v3 Cicer arietinum L. HOM05D005643 ORTHO05D006819 1.2e-74 283.9 184 76.6
Pp3c18_20140 Physcomitrium patens HOM05D005643 ORTHO05D006819 1.6e-74 283.5 219 64.8
C02p11600 Brassica napus HOM05D005643 ORTHO05D006819 2.1e-74 283.1 206 68.9
Zm00001eb208970 Zea mays HOM05D005643 ORTHO05D006819 2.1e-74 283.1 167 81.4
MD03G1113200 Malus domestica HOM05D005643 ORTHO05D006819 4.0e-73 278.9 176 79.0
Oeu002854.1 Olea europaea HOM05D005643 ORTHO05D006819 1.2e-72 277.3 207 68.1
Haze_23864 Corylus avellana HOM05D005643 ORTHO05D006819 1.3e-68 263.8 140 95.0
CBR_g31179 Chara braunii HOM05D005643 ORTHO05D006819 1.9e-67 260.0 244 55.7
vmacro03191 Vaccinium macrocarpon HOM05D005643 ORTHO05D006819 2.5e-67 259.6 250 58.8
MBI07_g42630_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 8.3e-63 244.6 219 61.6
Cre03.g167051 Chlamydomonas reinhardtii HOM05D005643 ORTHO05D006819 7.0e-62 241.5 217 57.1
BcaC04g19711 Brassica carinata HOM05D005643 ORTHO05D006819 6.6e-60 235.0 255 54.1
MCO05G014 Micromonas commoda HOM05D005643 ORTHO05D006819 6.8e-57 224.9 220 54.5
BcaC03g13961 Brassica carinata HOM05D005643 ORTHO05D006819 3.5e-53 212.6 135 75.6
Lj2A1030T57 Lonicera japonica HOM05D005643 ORTHO05D006819 1.3e-52 210.7 113 88.5
CiPaw.13G111500 Carya illinoinensis HOM05D005643 ORTHO05D006819 6.6e-52 208.4 140 80.0
TAR636G3455 Trochodendron aralioides HOM05D005643 ORTHO05D006819 5.4e-46 188.7 101 85.1
Oeu002855.1 Olea europaea HOM05D005643 ORTHO05D006819 4.6e-45 185.7 147 63.9
Cfa022863 Carpinus fangiana HOM05D005643 ORTHO05D006819 1.4e-41 174.1 267 40.1
Rhsim06G0101300 Rhododendron simsii HOM05D005643 ORTHO05D006819 1.6e-29 134.0 90 74.4
BraA02t05718Z Brassica rapa HOM05D005643 ORTHO05D006819 3.3e-27 126.3 67 85.1
SHI06096 Sapria himalayana HOM05D005643 ORTHO05D006819 1.4e-25 120.9 117 53.8
Cpa.g.sc216.17 Carica papaya HOM05D005643 ORTHO05D006819 1.4e-22 110.9 57 87.7
SHI06095 Sapria himalayana HOM05D005643 ORTHO05D006819 7.8e-21 105.1 72 68.1
Dinv12496 Davidia involucrata HOM05D005643 ORTHO05D006819 1.0e-20 104.8 76 69.7
TAR636G0837 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.1e-19 101.3 76 65.8
ClCG02G021090 Citrullus lanatus HOM05D005643 ORTHO05D006819 9.6e-19 98.2 75 72.0
Lj2A1030T58 Lonicera japonica HOM05D005643 ORTHO05D006819 1.5e-16 90.9 70 61.4
Cpa.g.sc216.18 Carica papaya HOM05D005643 ORTHO05D006819 3.8e-15 86.3 71 64.8
SHI06094 Sapria himalayana HOM05D000105 ORTHO05D000023 1.3e-10 71.2 58 69.0
TAR005G0002 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.1e-09 68.2 66 56.1
Rhsim13G0093600 Rhododendron simsii HOM05D000699 ORTHO05D000519 5.3e-09 65.9 38 78.9
MBI07_g43742_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 1.4e-06 57.8 77 51.9
PRCOL_00006457 Prasinoderma coloniale HOM05D005643 ORTHO05D006819 9.3e-06 55.1 105 36.2


User provided reference genes

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