Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 2.8e-274 948.0 476 100.0
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 8.2e-205 717.2 434 81.3
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 1.6e-176 623.2 433 71.6
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 9.1e-172 607.4 449 68.6
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 9.1e-172 607.4 433 68.8
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 1.1e-169 600.5 435 68.7
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 4.2e-169 598.6 433 67.9
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 1.0e-167 594.0 437 69.3
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 5.2e-167 591.7 429 66.7
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 1.7e-165 586.6 422 67.5
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 4.8e-165 585.1 432 65.5
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 1.4e-164 583.6 439 64.9
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.4e-164 581.6 433 64.4
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.4e-164 581.6 428 65.0
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 3.5e-163 578.9 435 65.1
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 1.3e-162 577.0 434 66.1
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 2.2e-162 576.2 433 64.0
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 1.1e-161 573.9 432 64.1
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 1.5e-158 563.5 433 63.3
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 5.4e-156 555.1 431 62.9
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 2.7e-155 552.7 429 61.1
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 4.5e-155 552.0 428 64.3
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 7.7e-155 551.2 432 62.5
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 7.7e-155 551.2 429 63.2
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 1.1e-153 547.4 465 59.8
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 5.6e-153 545.0 427 62.1
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 4.7e-152 542.0 430 60.5
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 2.0e-150 536.6 409 63.6
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 2.2e-149 533.1 425 60.5
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 2.2e-149 533.1 380 68.9
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 2.4e-148 529.6 427 60.9
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 9.2e-148 527.7 433 59.8
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 1.6e-147 526.9 444 58.3
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 7.8e-147 524.6 434 59.2
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 1.3e-146 523.9 425 60.7
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 2.3e-146 523.1 433 61.0
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 3.1e-143 512.7 435 60.7
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 3.1e-143 512.7 437 60.2
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 3.1e-143 512.7 414 60.1
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 1.5e-142 510.4 434 60.1
Haze_03152 Corylus avellana HOM05D002214 ORTHO05D007367 2.0e-142 510.0 440 65.2
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 4.4e-142 508.8 428 59.6
Haze_03149 Corylus avellana HOM05D002214 ORTHO05D007367 9.8e-142 507.7 440 65.0
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 4.9e-141 505.4 434 58.1
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 4.9e-141 505.4 428 59.3
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 1.4e-140 503.8 434 56.2
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 4.1e-140 502.3 425 58.1
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 9.2e-140 501.1 425 58.8
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 2.7e-139 499.6 425 58.4
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 6.0e-139 498.4 425 58.4
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 7.8e-139 498.0 434 56.7
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 2.3e-138 496.5 425 57.4
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 8.6e-138 494.6 425 57.6
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 1.1e-137 494.2 431 58.0
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 4.3e-137 492.3 471 55.0
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 9.5e-137 491.1 430 56.7
QL04p010150 Quercus lobata HOM05D002214 ORTHO05D007367 1.2e-136 490.7 361 69.3
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 1.1e-135 487.6 424 56.8
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 1.8e-135 486.9 448 54.9
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 3.1e-135 486.1 442 55.7
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 8.9e-135 484.6 445 55.3
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 2.6e-134 483.0 433 55.4
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 7.5e-134 481.5 461 54.0
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 1.3e-133 480.7 442 55.2
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 6.4e-133 478.4 427 56.4
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 1.9e-132 476.9 420 55.2
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 7.8e-131 471.5 414 58.0
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 3.9e-130 469.2 309 71.8
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 4.3e-129 465.7 310 69.4
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 4.3e-129 465.7 422 55.9
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 1.4e-127 460.7 505 47.5
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 1.5e-126 457.2 426 55.2
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 2.7e-123 446.4 418 54.5
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 6.0e-123 445.3 405 53.1
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 1.0e-122 444.5 423 51.3
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 1.1e-119 434.5 441 53.3
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 5.8e-118 428.7 370 56.2
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 7.6e-118 428.3 308 67.5
ClCG09G004430 Citrullus lanatus HOM05D002214 ORTHO05D007367 9.9e-118 427.9 381 57.2
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 9.9e-118 427.9 437 53.8
unitig_22.g5896 Utricularia gibba HOM05D002214 ORTHO05D007367 1.3e-117 427.6 415 51.1
ATR0782G063 Amborella trichopoda HOM05D002214 ORTHO05D007367 5.4e-116 422.2 420 51.2
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 3.0e-114 416.4 413 51.1
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 4.8e-112 409.1 444 46.6
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 1.4e-111 407.5 449 46.8
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 1.8e-111 407.1 409 48.9
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 4.8e-104 382.5 438 49.3
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 3.8e-101 372.9 258 70.2
Oeu051405.1 Olea europaea HOM05D002214 ORTHO05D007367 3.7e-96 356.3 306 57.5
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.2e-91 341.3 450 47.6
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 1.6e-91 340.9 450 47.1
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 1.0e-90 338.2 425 44.2
FAN24G2408 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.7e-85 320.9 455 44.8
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.9e-85 320.1 450 45.8
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 1.1e-84 318.2 436 43.1
FAN06G2164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.2e-83 314.7 230 63.9
HanXRQChr04g0119861 Helianthus annuus HOM05D002214 ORTHO05D007367 2.7e-83 313.5 274 54.0
SalBow6G2835 Salvia bowleyana HOM05D002214 ORTHO05D007367 5.3e-79 299.3 300 51.7
FAN27G1816 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.0e-77 295.0 456 42.1
FAN27G1164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.2e-72 277.3 417 43.2
QL04p010120 Quercus lobata HOM05D002214 ORTHO05D007367 5.9e-70 269.2 203 68.0
Cpa.g.sc125.50 Carica papaya HOM05D002214 ORTHO05D007367 1.7e-64 251.1 197 65.0
Aa31LG10G14890 Aethionema arabicum HOM05D002214 ORTHO05D007367 1.8e-63 247.7 232 55.6
Cpa.g.sc125.51 Carica papaya HOM05D002214 ORTHO05D007367 2.4e-63 247.3 261 54.0
RcHm_v2.0_Chr6g0283161 Rosa chinensis HOM05D002214 ORTHO05D007367 2.0e-57 227.6 307 46.9
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 2.8e-56 223.8 337 39.5
AagrBONN_evm.TU.Sc2ySwM_344.2511 Anthoceros agrestis HOM05D002214 ORTHO05D007367 5.3e-55 219.5 446 31.4
MD07G1016900 Malus domestica HOM05D002214 ORTHO05D007367 4.5e-54 216.5 221 52.5
CDE04G0429 Ceratophyllum demersum HOM05D002214 ORTHO05D007367 6.8e-50 202.6 190 52.1
Hma1.2p1_0685F.1_g203270 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 6.8e-50 202.6 149 64.4
Lj9A641T67 Lonicera japonica HOM05D002214 ORTHO05D007367 4.8e-48 196.4 306 37.9
Pp3c8_19810 Physcomitrium patens HOM05D002214 ORTHO05D007367 2.7e-46 190.7 424 29.2
Hund16633 Selenicereus undatus HOM05D002214 ORTHO05D007367 4.2e-44 183.3 151 60.3
FvH4_2g17910 Fragaria vesca HOM05D002214 ORTHO05D007367 9.5e-44 182.2 231 45.0
FAN24G3278 Fragaria x ananassa HOM05D002214 ORTHO05D007367 9.5e-44 182.2 231 45.0
FAN06G4994 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.0e-42 177.2 156 58.3
Hund16632 Selenicereus undatus HOM05D002214 ORTHO05D007367 2.6e-41 174.1 166 51.8
SEGI_30351 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 1.4e-34 151.8 140 52.9
SMO137G0282 Selaginella moellendorffii HOM05D002214 ORTHO05D007367 2.6e-33 147.5 351 30.5
Thecc.01G405700 Theobroma cacao HOM05D002214 ORTHO05D007367 3.2e-31 140.6 107 61.7
CBR_g46897 Chara braunii HOM05D002214 ORTHO05D007367 2.7e-30 137.5 371 28.6
Aa31LG10G14900 Aethionema arabicum HOM05D002214 ORTHO05D007367 6.0e-30 136.3 122 54.1
Thecc.01G405800 Theobroma cacao HOM05D002214 ORTHO05D007367 2.1e-27 127.9 81 75.3
Oeu016638.1 Olea europaea HOM05D002214 ORTHO05D007367 1.4e-26 125.2 104 58.7
Mapoly0009s0234 Marchantia polymorpha HOM05D002214 ORTHO05D007367 9.8e-25 119.0 331 30.5
Hma1.2p1_0685F.1_g203250 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 1.7e-24 118.2 128 52.3
SEGI_07097 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 2.7e-22 110.9 135 40.0
Duzib133G0745 Durio zibethinus HOM05D002214 ORTHO05D007367 2.5e-20 104.4 67 67.2
Cfa010817 Carpinus fangiana HOM05D000058 ORTHO05D043498 7.8e-14 82.8 46 93.5
FAN24G0587 Fragaria x ananassa HOM05D002214 ORTHO05D045595 6.6e-13 79.7 87 50.6
Lj9C641T18 Lonicera japonica HOM05D002214 ORTHO05D007367 1.1e-10 72.4 107 42.1
FAN27G0150 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.2e-06 58.9 147 29.3


User provided reference genes

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