Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 0.0e+00 1319.7 681 100.0
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 1.2e-230 803.5 465 88.0
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 2.3e-216 756.1 521 76.6
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 3.0e-200 702.6 461 77.4
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 4.6e-185 652.1 445 74.2
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 3.0e-184 649.4 465 74.2
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 2.9e-179 632.9 445 72.4
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 1.1e-178 630.9 452 70.4
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 4.2e-178 629.0 459 69.7
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 7.9e-177 624.8 423 74.0
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 6.7e-176 621.7 424 73.1
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 8.7e-176 621.3 423 73.0
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 1.0e-171 607.8 429 71.1
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 2.2e-171 606.7 490 65.9
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 5.5e-170 602.1 452 69.2
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 9.3e-170 601.3 437 69.1
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 1.2e-169 600.9 430 70.2
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 3.5e-169 599.4 495 62.8
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 1.3e-168 597.4 432 69.2
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 3.0e-168 596.3 437 68.9
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 1.5e-167 594.0 484 62.2
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 4.3e-167 592.4 455 67.5
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 9.7e-167 591.3 424 67.7
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.6e-166 590.5 455 67.5
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 2.8e-166 589.7 489 62.0
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 4.8e-166 589.0 421 70.3
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 1.1e-165 587.8 413 69.5
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 1.8e-165 587.0 475 62.9
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 2.4e-165 586.6 468 65.0
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 9.0e-165 584.7 468 64.7
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 9.0e-165 584.7 493 63.5
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 1.2e-164 584.3 432 67.4
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 3.4e-164 582.8 419 69.0
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 1.3e-163 580.9 414 68.6
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 1.7e-163 580.5 467 64.0
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 1.7e-163 580.5 430 68.6
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 3.8e-163 579.3 443 65.9
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 5.0e-163 578.9 413 67.8
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 5.0e-163 578.9 424 66.7
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 6.5e-163 578.6 458 63.3
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 1.4e-162 577.4 396 72.0
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 3.2e-162 576.2 449 64.1
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 7.2e-162 575.1 455 66.2
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 1.6e-161 573.9 421 67.7
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 2.7e-161 573.2 414 67.4
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 7.9e-161 571.6 471 62.4
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 2.0e-159 567.0 414 66.7
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 5.7e-159 565.5 421 66.5
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 5.7e-159 565.5 434 65.9
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 1.3e-158 564.3 421 66.3
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 2.8e-158 563.1 506 59.9
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 3.7e-158 562.8 439 64.9
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 3.7e-158 562.8 422 66.6
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 6.3e-158 562.0 421 66.0
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 6.3e-158 562.0 424 65.1
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 1.1e-157 561.2 421 65.6
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 1.4e-157 560.8 453 64.5
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 1.8e-157 560.5 449 62.4
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 2.4e-157 560.1 417 67.1
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 5.3e-157 558.9 437 64.1
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 1.5e-156 557.4 488 61.5
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 3.4e-156 556.2 414 65.9
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 6.5e-155 552.0 471 60.5
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 8.5e-155 551.6 435 63.4
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 1.1e-154 551.2 419 65.9
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 1.1e-154 551.2 486 60.9
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 2.5e-154 550.1 419 66.1
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 7.9e-153 545.0 386 68.9
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 1.0e-152 544.7 406 65.5
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 1.8e-152 543.9 423 65.7
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 8.8e-152 541.6 488 60.5
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 8.2e-150 535.0 479 57.4
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 5.3e-149 532.3 369 69.4
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 1.6e-148 530.8 400 65.8
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 3.5e-148 529.6 422 61.6
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 5.9e-148 528.9 477 57.9
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 1.6e-145 520.8 443 59.8
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 2.7e-145 520.0 421 61.8
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 2.7e-145 520.0 425 64.7
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 1.0e-144 518.1 399 64.7
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 1.8e-144 517.3 479 57.6
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 1.8e-144 517.3 367 71.1
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 3.3e-143 513.1 464 57.8
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 9.7e-143 511.5 375 66.4
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 1.3e-142 511.1 387 66.1
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 1.7e-139 500.7 474 56.5
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 1.1e-138 498.0 387 63.8
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 1.5e-135 487.6 364 64.0
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 3.7e-134 483.0 359 64.9
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 1.1e-133 481.5 419 57.3
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 3.8e-131 473.0 477 54.1
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 1.0e-128 464.9 442 56.1
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 8.8e-128 461.8 418 55.5
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 1.2e-124 451.4 311 73.6
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.3e-123 448.0 418 56.0
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 2.2e-110 404.1 279 72.0
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 6.6e-107 392.5 335 67.2
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 5.6e-106 389.4 424 49.8
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.6e-105 387.9 424 48.8
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 2.5e-98 364.0 422 45.5
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 3.8e-94 350.1 449 42.5
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 4.3e-90 336.7 222 72.5
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 1.8e-88 331.3 418 43.1
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 2.4e-88 330.9 296 55.4
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 2.9e-86 323.9 383 48.0
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 1.1e-85 322.0 395 44.8
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 2.3e-83 314.3 256 64.8
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 1.8e-75 288.1 206 70.4
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 1.5e-55 221.9 452 36.1
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 4.8e-49 200.3 221 49.8
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 1.5e-47 195.3 444 31.1
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 2.2e-38 164.9 102 74.5
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 4.2e-37 160.6 108 70.4
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 7.9e-36 156.4 160 52.5
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 6.7e-35 153.3 115 67.0
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 5.3e-32 143.7 116 61.2
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 8.8e-27 126.3 112 56.2
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.3e-25 122.5 80 73.8
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 5.3e-24 117.1 97 69.1
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 1.9e-21 108.6 400 25.2
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 1.7e-17 95.5 83 49.4
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 2.4e-16 91.7 65 70.8
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 2.8e-12 78.2 83 59.0
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.8e-12 78.2 68 52.9
Cfa003510 Carpinus fangiana HOM05D001849 ORTHO05D004075 1.0e-11 76.3 42 88.1
Haze_16065 Corylus avellana HOM05D001849 ORTHO05D004075 1.8e-11 75.5 42 88.1
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 5.2e-11 73.9 51 66.7
CiPaw.01G215800 Carya illinoinensis HOM05D001849 ORTHO05D004075 3.7e-09 67.8 46 73.9
Os09g0514100 Oryza sativa ssp. japonica HOM05D006204 ORTHO05D007851 9.2e-08 63.2 58 60.3
CiPaw.02G133700 Carya illinoinensis HOM05D001849 ORTHO05D004075 3.5e-07 61.2 42 64.3
Atru.chr1.4088 Acer truncatum HOM05D001849 ORTHO05D004075 2.9e-06 58.2 40 70.0


User provided reference genes

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