Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa010207 Carpinus fangiana HOM05D001879 ORTHO05D007648 3.9e-24 114.0 59 100.0
Cfa013681 Carpinus fangiana HOM05D001879 ORTHO05D007648 1.1e-15 85.9 47 91.5
Haze_22324 Corylus avellana HOM05D001879 ORTHO05D007648 1.1e-15 85.9 47 91.5
CiPaw.07G175900 Carya illinoinensis HOM05D001879 ORTHO05D007648 6.9e-13 76.6 46 84.8
Prupe.1G423900 Prunus persica HOM05D001879 ORTHO05D007648 1.7e-11 72.0 46 73.9
MD08G1086000 Malus domestica HOM05D001879 ORTHO05D007648 2.2e-11 71.6 47 74.5
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 1.1e-10 69.3 47 74.5
QL12p037902 Quercus lobata HOM05D001879 ORTHO05D007648 2.5e-10 68.2 60 65.0
Dinv44962 Davidia involucrata HOM05D001879 ORTHO05D007648 3.2e-10 67.8 47 72.3
TWI56G1003 Tripterygium wilfordii HOM05D001879 ORTHO05D007648 5.5e-10 67.0 45 75.6
FAN15G3244 Fragaria x ananassa HOM05D001879 ORTHO05D007648 3.6e-09 64.3 45 68.9
FvH4_2g33220 Fragaria vesca HOM05D001879 ORTHO05D007648 7.9e-09 63.2 45 66.7
FAN24G0874 Fragaria x ananassa HOM05D001879 ORTHO05D007648 7.9e-09 63.2 45 66.7
FAN27G0954 Fragaria x ananassa HOM05D001879 ORTHO05D007648 7.9e-09 63.2 45 66.7
Manes.05G181200 Manihot esculenta HOM05D001879 ORTHO05D007648 1.0e-08 62.8 45 68.9
RcHm_v2.0_Chr6g0309441 Rosa chinensis HOM05D001879 ORTHO05D007648 1.0e-08 62.8 44 68.2
CANSAT25G1585 Cannabis sativa HOM05D001879 ORTHO05D007648 1.8e-08 62.0 45 68.9
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 1.8e-08 62.0 47 68.1
DCAR_008854 Daucus carota HOM05D001879 ORTHO05D007648 1.8e-08 62.0 53 60.4
FAN20G0949 Fragaria x ananassa HOM05D001879 ORTHO05D007648 3.0e-08 61.2 45 66.7
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 6.7e-08 60.1 46 65.2
Lj4A759T48 Lonicera japonica HOM05D001879 ORTHO05D007648 8.8e-08 59.7 53 52.8
Thecc.08G090000 Theobroma cacao HOM05D001879 ORTHO05D007648 1.1e-07 59.3 47 63.8
SalBow7G0276 Salvia bowleyana HOM05D001879 ORTHO05D007648 4.4e-07 57.4 47 66.0
GSVIVG01009356001 Vitis vinifera HOM05D001879 ORTHO05D007648 4.4e-07 57.4 43 69.8
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 5.7e-07 57.0 45 64.4
CsaV3_4G034990 Cucumis sativus L. HOM05D001879 ORTHO05D007648 5.7e-07 57.0 45 64.4
Gohir.A05G209500 Gossypium hirsutum HOM05D001879 ORTHO05D007648 5.7e-07 57.0 46 60.9
Gorai.009G219200 Gossypium raimondii HOM05D001879 ORTHO05D007648 5.7e-07 57.0 46 60.9
Gohir.D05G212700 Gossypium hirsutum HOM05D001879 ORTHO05D007648 7.4e-07 56.6 46 60.9
ClCG05G020550 Citrullus lanatus HOM05D001879 ORTHO05D007648 2.2e-06 55.1 45 62.2
Nitab4.5_0003803g0020 Nicotiana tabacum HOM05D001879 ORTHO05D007648 2.2e-06 55.1 47 61.7
Sed0027780 Sechium edule HOM05D001879 ORTHO05D007648 4.8e-06 53.9 41 68.3
CSS0015613 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007648 8.2e-06 53.1 37 73.0


User provided reference genes

Program Settings