Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa009703 Carpinus fangiana HOM05D061121 ORTHO05D020346 3.9e-72 274.6 134 100.0
Cfa009702 Carpinus fangiana HOM05D061121 ORTHO05D020346 7.7e-68 260.4 134 94.8
Haze_23050 Corylus avellana HOM05D000111 ORTHO05D164516 3.8e-43 178.3 127 71.7
Haze_23055 Corylus avellana HOM05D000111 ORTHO05D000134 1.1e-29 133.7 127 59.1
Cfa009710 Carpinus fangiana HOM05D000111 ORTHO05D020346 4.7e-25 118.2 127 47.2
Cfa010121 Carpinus fangiana HOM05D000111 ORTHO05D020346 1.5e-23 113.2 132 52.3
Cfa012909 Carpinus fangiana HOM05D000111 ORTHO05D020346 2.6e-23 112.5 129 50.4
Haze_15903 Corylus avellana HOM05D000111 ORTHO05D000134 9.2e-21 104.0 124 43.5
Haze_16110 Corylus avellana HOM05D000111 ORTHO05D000134 7.8e-20 100.9 123 43.9
Haze_15902 Corylus avellana HOM05D000111 ORTHO05D000134 1.7e-19 99.8 123 42.3
Thecc.06G105000 Theobroma cacao HOM05D000111 ORTHO05D000134 1.2e-17 93.6 126 42.1
Haze_10974 Corylus avellana HOM05D000111 ORTHO05D000134 3.6e-17 92.0 125 44.0
Haze_15899 Corylus avellana HOM05D000111 ORTHO05D000134 1.1e-16 90.5 125 43.2
QL05p017133 Quercus lobata HOM05D000111 ORTHO05D000134 2.6e-15 85.9 125 37.6
Ciclev10026973m.g Citrus clementina HOM05D000111 ORTHO05D000134 5.8e-15 84.7 126 38.1
Ciclev10027524m.g Citrus clementina HOM05D000111 ORTHO05D000134 7.6e-15 84.3 125 38.4
Ciclev10027076m.g Citrus clementina HOM05D000111 ORTHO05D000134 9.9e-15 84.0 123 38.2
Ciclev10027221m.g Citrus clementina HOM05D000111 ORTHO05D000134 8.4e-14 80.9 123 37.4
Ciclev10026136m.g Citrus clementina HOM05D000111 ORTHO05D000134 5.4e-13 78.2 125 39.2
Haze_15900 Corylus avellana HOM05D000111 ORTHO05D000134 7.1e-13 77.8 99 42.4
Duzib235G0775 Durio zibethinus HOM05D000111 ORTHO05D000134 9.2e-13 77.4 127 40.2
MD09G1198100 Malus domestica HOM05D000111 ORTHO05D000134 9.2e-13 77.4 137 35.0
Duzib235G0562 Durio zibethinus HOM05D000111 ORTHO05D000134 2.7e-12 75.9 129 36.4
Duzib235G0932 Durio zibethinus HOM05D000111 ORTHO05D000134 2.7e-12 75.9 129 37.2
Haze_15908 Corylus avellana HOM05D000111 ORTHO05D000134 1.7e-11 73.2 125 36.8
Actinidia39126 Actinidia chinensis HOM05D000111 ORTHO05D000134 2.3e-11 72.8 130 40.0
Duzib235G1263 Durio zibethinus HOM05D000111 ORTHO05D000134 2.3e-11 72.8 129 36.4
QL05p017183 Quercus lobata HOM05D000111 ORTHO05D000134 2.3e-11 72.8 125 34.4
Hma1.2p1_2150F.1_g315210 Hydrangea macrophylla HOM05D000111 ORTHO05D000134 3.9e-11 72.0 123 35.8
Dinv32159 Davidia involucrata HOM05D000111 ORTHO05D020346 1.5e-10 70.1 127 38.6
PSO339G3773 Papaver somniferum HOM05D000111 ORTHO05D000134 1.5e-10 70.1 134 35.8
PSO339G5569 Papaver somniferum HOM05D000111 ORTHO05D000134 1.5e-10 70.1 134 35.8
GSVIVG01011532001 Vitis vinifera HOM05D000111 ORTHO05D000134 1.9e-10 69.7 125 36.0
COL.COLO4_30570 Corchorus olitorius HOM05D000111 ORTHO05D000134 4.3e-10 68.6 123 35.8
PGR102G1938 Punica granatum HOM05D000111 ORTHO05D000134 5.6e-10 68.2 100 36.0
Manes.10G064100 Manihot esculenta HOM05D000111 ORTHO05D000134 7.3e-10 67.8 128 39.8
COL.COLO4_30571 Corchorus olitorius HOM05D005216 ORTHO05D006453 9.6e-10 67.4 127 35.4
PSO063G1002 Papaver somniferum HOM05D000111 ORTHO05D000134 1.2e-09 67.0 132 35.6
Haze_23040 Corylus avellana HOM05D000073 ORTHO05D000033 2.1e-09 66.2 67 52.2
COL.COLO4_32851 Corchorus olitorius HOM05D000111 ORTHO05D000134 2.8e-09 65.9 127 35.4
TAR636G2168 Trochodendron aralioides HOM05D000111 ORTHO05D000134 2.8e-09 65.9 125 35.2
Hma1.2p1_0480F.1_g161890 Hydrangea macrophylla HOM05D000111 ORTHO05D000134 3.6e-09 65.5 126 32.5
PSO765G0077 Papaver somniferum HOM05D000111 ORTHO05D000134 8.1e-09 64.3 130 33.1
COL.COLO4_30569 Corchorus olitorius HOM05D000111 ORTHO05D000134 1.4e-08 63.5 123 33.3
Haze_15906 Corylus avellana HOM05D000111 ORTHO05D000134 3.1e-08 62.4 125 33.6
PSO676G0019 Papaver somniferum HOM05D000111 ORTHO05D000134 3.1e-08 62.4 101 39.6
Medtr3g077430 Medicago truncatula HOM05D000111 ORTHO05D000134 8.9e-08 60.8 131 31.3
Prupe.3G054100 Prunus persica HOM05D000111 ORTHO05D000134 8.9e-08 60.8 124 36.3
TAR636G3022 Trochodendron aralioides HOM05D000111 ORTHO05D000134 8.9e-08 60.8 124 33.1
PSO724G1148 Papaver somniferum HOM05D000111 ORTHO05D000134 1.2e-07 60.5 104 36.5
PSO675G1949 Papaver somniferum HOM05D000111 ORTHO05D000134 1.5e-07 60.1 142 33.8
VMungo0251G2473 Vigna mungo HOM05D000111 ORTHO05D000134 2.0e-07 59.7 133 33.1
PSO017G2496 Papaver somniferum HOM05D000111 ORTHO05D000134 2.6e-07 59.3 106 39.6
PSO210G2113 Papaver somniferum HOM05D000111 ORTHO05D000134 2.6e-07 59.3 138 31.2
Cc08_g10130 Coffea canephora HOM05D000111 ORTHO05D000134 3.4e-07 58.9 129 31.8
PSO478G2427 Papaver somniferum HOM05D000111 ORTHO05D000134 5.8e-07 58.2 134 32.1
AUR62024304 Chenopodium quinoa HOM05D000111 ORTHO05D000134 7.6e-07 57.8 133 33.1
TPR.G16978 Trifolium pratense HOM05D000111 ORTHO05D001334 7.6e-07 57.8 136 33.8
Glyma.18G142900 Glycine max HOM05D000111 ORTHO05D000134 9.9e-07 57.4 133 31.6
PSO675G2885 Papaver somniferum HOM05D000111 ORTHO05D000134 9.9e-07 57.4 130 33.8
Ah.02g130150 Amaranthus hybridus HOM05D000111 ORTHO05D000134 1.3e-06 57.0 133 33.8
CANSAT56G1352 Cannabis sativa HOM05D000111 ORTHO05D000134 1.3e-06 57.0 98 34.7
unitig_750.g28419 Utricularia gibba HOM05D000111 ORTHO05D000134 1.3e-06 57.0 132 33.3
Gohir.D08G270200 Gossypium hirsutum HOM05D000111 ORTHO05D000134 2.2e-06 56.2 152 29.6
Gorai.004G288100 Gossypium raimondii HOM05D000111 ORTHO05D000134 2.2e-06 56.2 152 29.6
Sp5g25700 Schrenkiella parvula HOM05D000111 ORTHO05D000134 2.2e-06 56.2 130 30.0
unitig_750.g28416 Utricularia gibba HOM05D000111 ORTHO05D000134 2.2e-06 56.2 138 29.0
Dinv15249 Davidia involucrata HOM05D000111 ORTHO05D000134 3.8e-06 55.5 132 34.8
AUR62005433 Chenopodium quinoa HOM05D000111 ORTHO05D000134 4.9e-06 55.1 133 31.6
Eucgr.C01571 Eucalyptus grandis HOM05D000111 ORTHO05D000134 4.9e-06 55.1 126 29.4
Phvul.003G063100 Phaseolus vulgaris HOM05D000111 ORTHO05D000134 4.9e-06 55.1 103 35.9
Psat5g115160 Pisum sativum HOM05D000111 ORTHO05D000134 4.9e-06 55.1 130 30.0
Thhalv10004316m.g Eutrema salsugineum HOM05D000111 ORTHO05D000134 6.4e-06 54.7 119 35.3
HanXRQChr08g0208511 Helianthus annuus HOM05D000111 ORTHO05D000134 6.4e-06 54.7 102 31.4
PSO170G1276 Papaver somniferum HOM05D000111 ORTHO05D000134 6.4e-06 54.7 132 30.3
QL02p001753 Quercus lobata HOM05D000111 ORTHO05D000134 6.4e-06 54.7 111 31.5
TAR375G0947 Trochodendron aralioides HOM05D000111 ORTHO05D001334 6.4e-06 54.7 124 29.0
Aqoxy7G01344 Aquilegia oxysepala HOM05D000111 ORTHO05D000134 8.4e-06 54.3 114 33.3
Carub.0006s2371 Capsella rubella HOM05D000111 ORTHO05D000134 8.4e-06 54.3 113 35.4
Thhalv10018508m.g Eutrema salsugineum HOM05D000111 ORTHO05D000134 8.4e-06 54.3 130 30.8
Gohir.D08G270000 Gossypium hirsutum HOM05D000111 ORTHO05D000134 8.4e-06 54.3 124 29.0
Gorai.004G287900 Gossypium raimondii HOM05D000111 ORTHO05D000134 8.4e-06 54.3 124 29.0
Manes.17G029400 Manihot esculenta HOM05D000111 ORTHO05D000134 8.4e-06 54.3 124 29.0
PGR102G1875 Punica granatum HOM05D000111 ORTHO05D000134 8.4e-06 54.3 131 35.1


User provided reference genes

Program Settings