Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa009332 Carpinus fangiana HOM05D005952 ORTHO05D007262 1.9e-175 619.4 382 100.0
Haze_12392 Corylus avellana HOM05D005952 ORTHO05D007262 2.5e-156 555.8 336 89.0
CiPaw.06G101100 Carya illinoinensis HOM05D005952 ORTHO05D007262 2.7e-150 535.8 322 88.2
QL03p053757 Quercus lobata HOM05D005952 ORTHO05D007262 7.6e-145 517.7 322 85.7
Manes.13G018200 Manihot esculenta HOM05D005952 ORTHO05D007262 2.7e-142 509.2 316 83.9
Prupe.1G228700 Prunus persica HOM05D005952 ORTHO05D007262 4.3e-140 501.9 322 83.9
arahy.Tifrunner.gnm1.ann1.19W7I6 Arachis hypogaea HOM05D005952 ORTHO05D007262 1.6e-139 500.0 323 83.0
TWI75G1563 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 1.7e-136 490.0 316 83.2
MELO3C011875.2 Cucumis melo HOM05D005952 ORTHO05D007262 6.5e-136 488.0 321 81.3
CsaV3_5G030360 Cucumis sativus L. HOM05D005952 ORTHO05D007262 1.1e-135 487.3 321 81.0
Gohir.D02G150400 Gossypium hirsutum HOM05D005952 ORTHO05D007262 1.4e-135 486.9 324 81.8
Gorai.005G168700 Gossypium raimondii HOM05D005952 ORTHO05D007262 1.4e-135 486.9 324 81.2
PGR102G2583 Punica granatum HOM05D005952 ORTHO05D007262 1.9e-135 486.5 319 82.1
VMungo1383G3287 Vigna mungo HOM05D005952 ORTHO05D007262 1.9e-135 486.5 316 81.3
ClCG11G013770 Citrullus lanatus HOM05D005952 ORTHO05D007262 2.5e-135 486.1 321 81.9
Gohir.A03G127000 Gossypium hirsutum HOM05D005952 ORTHO05D007262 2.5e-135 486.1 324 82.1
Nn3g16502 Nelumbo nucifera HOM05D005952 ORTHO05D007262 1.2e-134 483.8 325 79.4
MD16G1117500 Malus domestica HOM05D005952 ORTHO05D007262 6.1e-134 481.5 317 81.7
Duzib251G0036 Durio zibethinus HOM05D005952 ORTHO05D007262 1.0e-133 480.7 321 81.3
TAR622G0739 Trochodendron aralioides HOM05D005952 ORTHO05D007262 6.7e-133 478.0 329 79.6
CANSAT01G2967 Cannabis sativa HOM05D005952 ORTHO05D007262 1.5e-132 476.9 326 79.4
COL.COLO4_20379 Corchorus olitorius HOM05D005952 ORTHO05D007262 1.9e-132 476.5 354 75.7
Atru.chr11.2304 Acer truncatum HOM05D005952 ORTHO05D007262 3.3e-132 475.7 324 80.2
Eucgr.B03481 Eucalyptus grandis HOM05D005952 ORTHO05D007262 3.3e-132 475.7 312 82.1
RcHm_v2.0_Chr4g0430621 Rosa chinensis HOM05D005952 ORTHO05D007262 5.7e-132 474.9 331 78.5
Dinv14825 Davidia involucrata HOM05D005952 ORTHO05D007262 1.3e-131 473.8 340 75.9
Phvul.001G260500 Phaseolus vulgaris HOM05D005952 ORTHO05D007262 1.3e-131 473.8 313 80.2
Cpa.g.sc43.12 Carica papaya HOM05D005952 ORTHO05D007262 4.8e-131 471.9 350 74.3
Solyc12g035650.2 Solanum lycopersicum HOM05D005952 ORTHO05D007262 6.3e-131 471.5 329 79.3
Sopen12g015910 Solanum pennellii HOM05D005952 ORTHO05D007262 6.3e-131 471.5 329 79.3
Ciclev10031923m.g Citrus clementina HOM05D005952 ORTHO05D007262 8.2e-131 471.1 319 79.9
Thecc.02G212400 Theobroma cacao HOM05D005952 ORTHO05D007262 8.2e-131 471.1 326 79.8
Potri.010G059100 Populus trichocarpa HOM05D005952 ORTHO05D007262 1.1e-130 470.7 329 78.1
FAN07G2304 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.1e-130 469.2 323 79.9
Sabra10G0046500 Salix brachista HOM05D005952 ORTHO05D007262 4.1e-130 468.8 331 77.3
CSS0022532 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 6.9e-130 468.0 312 79.8
CSS0029993 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 6.9e-130 468.0 312 79.8
Lalb_Chr12g0206321 Lupinus albus HOM05D005952 ORTHO05D007262 2.0e-129 466.5 318 78.3
Sed0028059 Sechium edule HOM05D005952 ORTHO05D007262 4.5e-129 465.3 304 81.6
AUR62024128 Chenopodium quinoa HOM05D005952 ORTHO05D007262 1.0e-128 464.2 323 77.7
Oeu036880.1 Olea europaea HOM05D005952 ORTHO05D007262 3.8e-128 462.2 359 72.1
Lsat_1_v5_gn_8_149221 Lactuca sativa HOM05D005952 ORTHO05D007262 8.5e-128 461.1 332 75.3
MSTRG.7992 Avicennia marina HOM05D005952 ORTHO05D007262 1.1e-127 460.7 329 77.2
THA.LOC104825515 Tarenaya hassleriana HOM05D005952 ORTHO05D007262 1.1e-127 460.7 319 76.5
FAN07G2604 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.4e-127 460.3 324 78.7
FAN24G3446 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.4e-127 460.3 324 78.7
Glyma.11G249200 Glycine max HOM05D005952 ORTHO05D007262 1.9e-127 459.9 320 77.5
EL10Ac6g13481 Beta vulgaris HOM05D005952 ORTHO05D007262 4.2e-127 458.8 326 77.6
Glyma.18G008100 Glycine max HOM05D005952 ORTHO05D007262 4.2e-127 458.8 312 79.2
Lj3A1066G68 Lonicera japonica HOM05D005952 ORTHO05D007262 5.5e-127 458.4 334 75.7
Nitab4.5_0000492g0130 Nicotiana tabacum HOM05D005952 ORTHO05D007262 5.5e-127 458.4 321 78.2
Potri.008G176100 Populus trichocarpa HOM05D005952 ORTHO05D007262 5.5e-127 458.4 333 76.3
Actinidia20698 Actinidia chinensis HOM05D005952 ORTHO05D007262 7.2e-127 458.0 302 79.8
CAN.G34.9 Capsicum annuum HOM05D005952 ORTHO05D007262 2.1e-126 456.4 331 76.4
C03p73530 Brassica napus HOM05D005952 ORTHO05D007262 2.7e-126 456.1 320 75.3
FvH4_4g23970 Fragaria vesca HOM05D005952 ORTHO05D007262 2.7e-126 456.1 329 76.0
Peaxi162Scf00518g00512 Petunia axillaris HOM05D005952 ORTHO05D007262 3.6e-126 455.7 333 76.9
Cc00_g13550 Coffea canephora HOM05D005952 ORTHO05D007262 6.1e-126 454.9 312 79.5
Aqoxy5G03416 Aquilegia oxysepala HOM05D005952 ORTHO05D007262 7.9e-126 454.5 338 73.4
HanXRQChr08g0207671 Helianthus annuus HOM05D005952 ORTHO05D007262 2.3e-125 453.0 329 74.8
GSVIVG01010442001 Vitis vinifera HOM05D005952 ORTHO05D007262 5.1e-125 451.8 258 89.1
Psat5g094800 Pisum sativum HOM05D005952 ORTHO05D007262 6.7e-125 451.4 323 75.5
Lj1g0012703 Lotus japonicus HOM05D005952 ORTHO05D007262 1.1e-124 450.7 314 76.4
MBI11_g07451_MAGBIO Magnolia biondii HOM05D005952 ORTHO05D007262 9.7e-124 447.6 271 86.0
Nitab4.5_0002026g0100 Nicotiana tabacum HOM05D005952 ORTHO05D007262 3.7e-123 445.7 322 77.3
Sp1g23460 Schrenkiella parvula HOM05D005952 ORTHO05D007262 3.7e-123 445.7 327 72.5
TWI36G0663 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 4.8e-123 445.3 316 77.2
CARHR026780 Cardamine hirsuta HOM05D005952 ORTHO05D007262 8.2e-123 444.5 323 73.1
Hund06080 Selenicereus undatus HOM05D005952 ORTHO05D007262 1.8e-122 443.4 319 76.2
BcaC01g01637 Brassica carinata HOM05D005952 ORTHO05D007262 4.1e-122 442.2 325 73.2
Sc04g0004640 Simmondsia chinensis HOM05D005952 ORTHO05D007262 4.1e-122 442.2 319 75.2
Ah.02g130720 Amaranthus hybridus HOM05D005952 ORTHO05D007262 5.3e-122 441.8 326 74.2
BolC3t19647H Brassica oleracea HOM05D005952 ORTHO05D007262 5.3e-122 441.8 325 73.2
MD13G1116800 Malus domestica HOM05D005952 ORTHO05D007262 5.3e-122 441.8 258 88.4
BcaB03g12064 Brassica carinata HOM05D005952 ORTHO05D007262 9.1e-122 441.0 326 73.0
A08p26510 Brassica napus HOM05D005952 ORTHO05D007262 1.2e-121 440.7 322 73.0
BraA08t34603Z Brassica rapa HOM05D005952 ORTHO05D007262 1.5e-121 440.3 323 72.8
Medtr3g085590 Medicago truncatula HOM05D005952 ORTHO05D007262 2.0e-121 439.9 322 74.5
AT1G24310 Arabidopsis thaliana HOM05D005952 ORTHO05D007262 7.7e-121 438.0 325 71.7
FAN03G3372 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.7e-120 436.8 334 74.9
Carub.0001s2576 Capsella rubella HOM05D005952 ORTHO05D007262 1.1e-119 434.1 324 71.3
AL1G40610 Arabidopsis lyrata HOM05D005952 ORTHO05D007262 1.9e-119 433.3 324 71.3
Migut.K00712 Erythranthe guttata HOM05D005952 ORTHO05D007262 1.9e-119 433.3 333 73.3
CDE02G4251 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 1.6e-118 430.3 314 75.2
Sed0012291 Sechium edule HOM05D005952 ORTHO05D007262 7.9e-118 427.9 311 74.3
arahy.Tifrunner.gnm1.ann1.2251QZ Arachis hypogaea HOM05D005952 ORTHO05D007262 1.4e-117 427.2 323 73.7
Aa31LG7G9800 Aethionema arabicum HOM05D005952 ORTHO05D007262 5.1e-117 425.2 318 72.0
SGA_v2.0_scaffold9G04762 Striga asiatica HOM05D005952 ORTHO05D007262 5.7e-116 421.8 357 67.2
ATR0561G264 Amborella trichopoda HOM05D005952 ORTHO05D007262 8.2e-115 417.9 314 71.0
ECA233G5976 Erigeron canadensis HOM05D005952 ORTHO05D007262 3.1e-114 416.0 322 70.5
AUR62005599 Chenopodium quinoa HOM05D005952 ORTHO05D007262 4.1e-114 415.6 293 76.8
Rhsim12G0102200 Rhododendron simsii HOM05D005952 ORTHO05D007262 5.9e-113 411.8 412 61.2
FAN27G1928 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.5e-111 406.4 316 72.5
FAN21G1414 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.9e-109 399.1 316 72.2
Ca_16474_v3 Cicer arietinum L. HOM05D005952 ORTHO05D007262 1.5e-108 397.1 241 83.8
DCAR_031192 Daucus carota HOM05D005952 ORTHO05D007262 7.4e-108 394.8 240 83.8
PSO063G3255 Papaver somniferum HOM05D005952 ORTHO05D007262 2.2e-107 393.3 293 73.0
PSO782G2816 Papaver somniferum HOM05D005952 ORTHO05D007262 7.0e-106 388.3 292 72.6
Os07g0295400 Oryza sativa ssp. japonica HOM05D005952 ORTHO05D007262 8.3e-99 364.8 263 68.1
Zm00001eb305390 Zea mays HOM05D005952 ORTHO05D007262 5.4e-98 362.1 265 68.3
HPP92_023193 Vanilla planifolia HOM05D005952 ORTHO05D007262 1.7e-96 357.1 313 63.9
FAN04G2616 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.1e-95 354.4 222 83.8
SHI17953 Sapria himalayana HOM05D005952 ORTHO05D007262 2.3e-93 346.7 283 66.1
SEGI_29251 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 1.3e-91 340.9 264 67.0
Mapoly0010s0010 Marchantia polymorpha HOM05D005952 ORTHO05D007262 2.2e-91 340.1 266 65.8
CDE06G2258 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 6.3e-91 338.6 313 62.6
SalBow2G2019 Salvia bowleyana HOM05D005952 ORTHO05D007262 2.4e-90 336.7 358 57.8
Pp3c10_15930 Physcomitrium patens HOM05D005952 ORTHO05D007262 1.7e-88 330.5 300 59.0
Pp3c10_15937 Physcomitrium patens HOM05D005952 ORTHO05D007262 1.7e-88 330.5 300 59.0
Thhalv10008300m.g Eutrema salsugineum HOM05D005952 ORTHO05D007262 4.7e-86 322.4 240 71.2
CBR_g21943 Chara braunii HOM05D005952 ORTHO05D007262 4.6e-81 305.8 332 52.1
AagrBONN_evm.TU.Sc2ySwM_362.1552 Anthoceros agrestis HOM05D005952 ORTHO05D007262 7.8e-81 305.1 265 57.7
CBR_g39502 Chara braunii HOM05D005952 ORTHO05D007262 7.8e-81 305.1 316 53.5
TWI36G1659 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 4.9e-75 285.8 330 56.4
FAN04G0683 Fragaria x ananassa HOM05D005952 ORTHO05D007262 9.2e-74 281.6 211 74.9
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 3.6e-70 269.6 219 67.1
Hma1.2p1_0668F.1_g200020 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 4.7e-70 269.2 168 86.3
Actinidia09658 Actinidia chinensis HOM05D005952 ORTHO05D007262 1.1e-69 268.1 288 59.4
Pp3c14_14130 Physcomitrium patens HOM05D005952 ORTHO05D007262 3.6e-54 216.5 205 56.6
FAN23G0106 Fragaria x ananassa HOM05D005952 ORTHO05D007262 6.4e-51 205.7 160 72.5
Hma1.2p1_0668F.1_g200040 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 2.1e-49 200.7 180 61.1
FAN04G0535 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.6e-33 147.9 106 78.3
SEGI_23869 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 1.2e-28 131.7 96 63.5
HanXRQChr03g0071651 Helianthus annuus HOM05D005952 ORTHO05D007262 1.5e-28 131.3 76 78.9
Migut.K01177 Erythranthe guttata HOM05D005952 ORTHO05D007262 4.5e-20 103.2 97 66.0
Cre12.g542950 Chlamydomonas reinhardtii HOM05D005952 ORTHO05D007262 2.9e-19 100.5 286 30.1
MCO04G375 Micromonas commoda HOM05D005952 ORTHO05D007262 2.9e-19 100.5 267 29.2
Oeu029609.1 Olea europaea HOM05D005952 ORTHO05D007262 2.1e-17 94.4 62 67.7
SEGI_30692 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 1.0e-16 92.0 112 47.3
Cfa009352 Carpinus fangiana HOM05D005952 ORTHO05D007262 4.8e-14 83.2 57 82.5
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 4.3e-07 60.1 121 38.0
BcaC03g16356 Brassica carinata HOM05D029489 ORTHO05D007262 1.7e-06 58.2 38 68.4
CARHR184250 Cardamine hirsuta HOM05D005952 ORTHO05D007262 8.2e-06 55.8 49 57.1


User provided reference genes

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