Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 2.8e-168 595.5 367 100.0
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 2.1e-152 542.7 410 86.3
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 1.8e-119 433.3 401 73.6
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 1.0e-114 417.5 350 76.0
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 1.2e-107 394.0 355 73.0
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.6e-107 393.7 335 69.9
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 1.6e-107 393.7 352 77.3
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 4.6e-107 392.1 314 79.9
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 1.0e-106 391.0 361 70.6
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 1.0e-106 391.0 301 69.1
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 2.3e-106 389.8 297 72.7
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 3.9e-106 389.0 349 71.9
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 5.1e-106 388.7 368 67.4
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 8.7e-106 387.9 302 79.1
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 5.7e-105 385.2 300 68.3
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 7.4e-105 384.8 297 72.7
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 9.7e-105 384.4 300 68.3
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 3.7e-104 382.5 244 78.7
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 3.1e-103 379.4 298 80.5
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 1.2e-102 377.5 303 79.5
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 2.6e-102 376.3 242 81.4
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 4.5e-102 375.6 301 69.4
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 5.9e-102 375.2 242 81.4
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 1.7e-101 373.6 296 80.7
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 3.8e-101 372.5 315 74.0
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 1.4e-100 370.5 317 75.4
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 2.5e-100 369.8 300 69.7
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 5.5e-100 368.6 297 69.4
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 5.5e-100 368.6 269 74.3
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 6.1e-99 365.2 282 83.3
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 1.0e-98 364.4 303 77.6
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 1.8e-98 363.6 299 68.2
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 3.9e-98 362.5 260 75.4
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 2.6e-97 359.8 278 69.4
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 9.7e-97 357.8 239 80.3
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 2.8e-96 356.3 239 79.5
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 2.8e-96 356.3 239 79.9
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 2.8e-96 356.3 242 79.3
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 3.7e-96 355.9 282 68.4
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 4.8e-96 355.5 256 81.6
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 6.3e-96 355.1 359 62.7
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 1.1e-95 354.4 240 77.1
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 1.1e-95 354.4 273 75.1
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 1.1e-95 354.4 245 74.7
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 1.4e-95 354.0 235 74.9
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 3.1e-95 352.8 300 65.3
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 4.1e-95 352.4 244 73.0
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 4.1e-95 352.4 236 79.7
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 9.1e-95 351.3 295 71.9
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 1.2e-94 350.9 303 71.9
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 2.0e-94 350.1 270 78.1
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 3.4e-94 349.4 259 74.5
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 5.9e-94 348.6 311 72.7
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 5.9e-94 348.6 274 73.7
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 1.3e-93 347.4 297 65.0
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 2.2e-93 346.7 277 73.6
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 2.2e-93 346.7 277 73.6
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 2.2e-93 346.7 245 75.1
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 2.9e-93 346.3 245 75.9
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 3.8e-93 345.9 277 73.6
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 3.8e-93 345.9 277 73.6
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 6.5e-93 345.1 237 76.4
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 8.5e-93 344.7 295 64.7
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 1.1e-92 344.4 288 72.2
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 5.5e-92 342.0 247 71.7
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 7.2e-92 341.7 261 70.9
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 2.6e-89 333.2 256 77.0
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 3.3e-89 332.8 224 78.6
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 1.4e-87 327.4 303 61.4
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 2.4e-87 326.6 266 85.0
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 1.6e-86 323.9 272 68.0
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 5.9e-86 322.0 240 74.2
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 1.0e-82 311.2 242 71.5
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 1.8e-82 310.5 260 62.3
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 2.6e-81 306.6 276 65.2
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 5.7e-81 305.4 240 71.7
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 2.4e-79 300.1 242 64.5
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 3.2e-76 289.7 211 73.5
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 6.8e-74 282.0 223 67.7
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 5.4e-63 245.7 192 72.4
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 2.3e-61 240.4 204 66.7
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 2.5e-60 236.9 186 69.4
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 3.6e-59 233.0 240 58.8
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 8.0e-59 231.9 244 57.8
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 2.5e-52 210.3 145 80.7
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 5.6e-52 209.1 145 80.7
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 2.1e-51 207.2 147 78.9
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 3.1e-50 203.4 136 77.9
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 1.5e-41 174.5 113 83.2
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 1.9e-39 167.5 176 55.1
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 1.3e-37 161.4 240 36.7
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.5e-33 147.9 115 78.3
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 1.1e-26 125.2 152 44.7
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.2e-25 121.7 73 91.8
QL03p065499 Quercus lobata HOM05D007647 ORTHO05D009644 7.9e-06 55.8 69 46.4


User provided reference genes

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