Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 1.1e-259 899.4 457 100.0
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 1.3e-252 875.9 460 97.2
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 1.9e-230 802.4 458 88.9
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 1.1e-225 786.6 468 86.1
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 1.0e-220 770.0 460 85.0
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 3.6e-218 761.5 461 84.2
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 3.1e-217 758.4 461 83.5
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 8.9e-217 756.9 461 82.0
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 1.2e-216 756.5 460 83.7
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 4.4e-216 754.6 469 84.0
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 5.8e-216 754.2 462 83.5
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 1.3e-215 753.1 461 83.9
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 6.4e-215 750.7 460 82.4
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 9.2e-214 746.9 462 82.7
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 1.2e-213 746.5 461 81.8
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 3.5e-213 745.0 466 83.3
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 1.0e-212 743.4 466 82.8
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 1.7e-212 742.7 461 82.6
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 3.9e-212 741.5 461 81.6
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 3.9e-212 741.5 459 81.9
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 8.6e-212 740.3 466 82.6
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 1.5e-211 739.6 462 81.2
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 1.9e-211 739.2 416 88.5
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 1.9e-211 739.2 460 80.4
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 2.5e-211 738.8 461 81.6
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 5.6e-211 737.6 461 81.3
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 5.6e-211 737.6 461 82.6
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 9.6e-211 736.9 460 82.6
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 6.2e-210 734.2 460 80.7
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 6.9e-209 730.7 461 80.0
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 6.9e-209 730.7 464 81.2
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 6.9e-209 730.7 461 80.3
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 1.5e-208 729.6 465 79.1
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 2.6e-208 728.8 461 80.3
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 5.8e-208 727.6 462 80.7
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 7.6e-208 727.2 460 79.3
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 7.6e-208 727.2 427 85.9
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 6.4e-207 724.2 462 79.2
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 1.4e-206 723.0 469 80.4
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 3.2e-206 721.8 465 80.0
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 9.3e-206 720.3 465 79.8
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 9.3e-206 720.3 458 79.9
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 9.3e-206 720.3 460 79.3
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 1.2e-205 719.9 487 77.2
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 2.7e-205 718.8 458 79.7
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 2.7e-205 718.8 455 80.0
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 1.7e-204 716.1 460 78.3
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 3.0e-204 715.3 459 80.6
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 5.1e-204 714.5 461 77.9
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 1.9e-203 712.6 461 79.0
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 3.3e-203 711.8 461 79.2
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 4.3e-203 711.4 461 77.4
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 7.3e-203 710.7 462 76.4
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 9.6e-203 710.3 458 78.2
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 1.3e-202 709.9 468 76.7
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 2.1e-202 709.1 469 77.6
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 3.1e-201 705.3 440 80.7
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 4.5e-200 701.4 468 76.9
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 1.7e-199 699.5 469 76.5
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 2.2e-199 699.1 464 74.8
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 3.8e-199 698.4 468 73.9
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 1.1e-198 696.8 464 75.0
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 1.1e-198 696.8 464 75.4
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 1.9e-198 696.0 465 75.3
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 2.4e-198 695.7 467 76.2
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 3.2e-198 695.3 481 73.8
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 5.4e-198 694.5 457 78.1
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 5.4e-198 694.5 468 76.3
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 5.4e-198 694.5 469 76.3
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 4.6e-197 691.4 434 80.9
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 7.9e-197 690.6 468 75.6
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 5.1e-196 688.0 461 74.6
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 6.7e-196 687.6 464 74.6
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 6.7e-196 687.6 464 74.6
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 6.7e-196 687.6 464 74.6
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 6.7e-196 687.6 464 73.1
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 8.7e-196 687.2 467 75.2
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 1.1e-195 686.8 465 75.3
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 1.1e-195 686.8 464 74.1
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 3.3e-195 685.3 463 73.9
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 9.6e-195 683.7 465 74.8
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 9.6e-195 683.7 465 75.5
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 9.6e-195 683.7 494 72.5
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 1.3e-194 683.3 463 74.1
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 4.8e-194 681.4 462 75.1
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 4.8e-194 681.4 467 73.4
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 8.1e-194 680.6 489 72.6
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 1.1e-193 680.2 469 72.5
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 3.1e-193 678.7 465 74.4
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 6.9e-193 677.6 464 73.1
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 7.6e-192 674.1 464 72.2
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 7.6e-192 674.1 509 69.5
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 7.6e-192 674.1 464 73.1
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 6.4e-191 671.0 465 74.6
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 1.1e-190 670.2 468 74.6
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 2.7e-189 665.6 405 78.5
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 4.8e-186 654.8 470 70.9
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 4.0e-185 651.7 422 75.8
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 4.5e-184 648.3 465 71.8
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 4.2e-182 641.7 420 76.2
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 3.0e-180 635.6 399 78.2
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 2.5e-179 632.5 461 69.6
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 9.6e-179 630.6 443 71.8
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 6.3e-178 627.9 455 69.0
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 3.4e-176 622.1 461 66.8
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 6.5e-175 617.8 415 76.4
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 2.1e-173 612.8 456 69.5
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 1.3e-170 603.6 465 66.5
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 4.5e-168 595.1 427 69.6
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 9.4e-166 587.4 399 75.4
FAN12G1274 Fragaria x ananassa HOM05D005575 ORTHO05D007355 1.7e-154 550.1 382 74.3
Lj3A720G71 Lonicera japonica HOM05D005575 ORTHO05D007355 5.9e-152 541.6 316 84.8
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 3.2e-142 509.2 399 63.7
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 9.1e-137 491.1 469 55.7
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 5.0e-135 485.3 402 59.2
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 5.9e-120 435.3 461 52.7
SHI00566 Sapria himalayana HOM05D005575 ORTHO05D007355 9.9e-107 391.3 281 69.0
Pp3c15_1060 Physcomitrium patens HOM05D005575 ORTHO05D007355 7.1e-105 385.2 416 52.6
Nn1g02522 Nelumbo nucifera HOM05D005575 ORTHO05D007355 6.6e-103 378.6 258 75.6
CBR_g10806 Chara braunii HOM05D005575 ORTHO05D007355 5.8e-99 365.5 552 38.8
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 9.3e-81 305.1 188 80.3
BcaC05g25996 Brassica carinata HOM05D005575 ORTHO05D007355 8.1e-77 292.0 267 59.2
BolC5t30651H Brassica oleracea HOM05D005575 ORTHO05D007355 1.2e-67 261.5 255 57.3
C05p19490 Brassica napus HOM05D005575 ORTHO05D007355 2.6e-67 260.4 255 56.9
TAR365G1190 Trochodendron aralioides HOM05D005575 ORTHO05D007355 5.0e-58 229.6 207 63.8
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 4.7e-48 196.4 145 69.0
SHI00565 Sapria himalayana HOM05D005575 ORTHO05D007355 8.2e-45 185.7 167 63.5
TAR365G1076 Trochodendron aralioides HOM05D005575 ORTHO05D007355 5.9e-43 179.5 119 81.5
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 1.3e-42 178.3 148 63.5
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 2.4e-36 157.5 126 65.1
AagrBONN_evm.TU.Sc2ySwM_344.3391 Anthoceros agrestis HOM05D005575 ORTHO05D007355 2.1e-32 144.4 367 29.4
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 6.1e-24 116.3 60 93.3
SalBow3G4542 Salvia bowleyana HOM05D005575 ORTHO05D007355 2.5e-17 94.4 57 82.5
Psat7g122560 Pisum sativum HOM05D005575 ORTHO05D007355 3.3e-17 94.0 59 72.9
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 4.7e-16 90.1 70 71.4
Cc06_g23150 Coffea canephora HOM05D005575 ORTHO05D007355 7.3e-09 66.2 65 55.4


User provided reference genes

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