Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa008323 Carpinus fangiana HOM05D000368 ORTHO05D009348 1.0e-93 347.4 282 100.0
Haze_13700 Corylus avellana HOM05D000368 ORTHO05D009348 3.7e-80 302.4 265 96.6
CiPaw.04G071400 Carya illinoinensis HOM05D000368 ORTHO05D009348 1.4e-66 257.3 282 81.6
Dinv35216 Davidia involucrata HOM05D000368 ORTHO05D000289 1.8e-58 230.3 282 74.5
QL09p014019 Quercus lobata HOM05D000368 ORTHO05D009348 8.6e-53 211.5 319 70.5
Manes.14G025600 Manihot esculenta HOM05D000368 ORTHO05D009348 8.9e-50 201.4 279 69.5
TAR629G3168 Trochodendron aralioides HOM05D000368 ORTHO05D009348 2.6e-49 199.9 290 66.9
Sabra15G0154200 Salix brachista HOM05D000368 ORTHO05D009348 3.4e-49 199.5 282 69.9
Ciclev10005579m.g Citrus clementina HOM05D000368 ORTHO05D009348 7.6e-49 198.4 282 68.4
Potri.012G141700 Populus trichocarpa HOM05D000368 ORTHO05D009348 1.9e-47 193.7 282 66.7
Cpa.g.sc107.59 Carica papaya HOM05D000368 ORTHO05D009348 7.1e-47 191.8 280 71.4
GSVIVG01028962001 Vitis vinifera HOM05D000368 ORTHO05D009348 2.1e-46 190.3 283 68.2
Potri.015G144600 Populus trichocarpa HOM05D000368 ORTHO05D009348 7.8e-46 188.3 282 67.4
THA.LOC104811975 Tarenaya hassleriana HOM05D000368 ORTHO05D009348 3.0e-45 186.4 284 68.3
TWI39G0209 Tripterygium wilfordii HOM05D000368 ORTHO05D009348 8.6e-45 184.9 285 70.9
Rhsim09G0197900 Rhododendron simsii HOM05D000368 ORTHO05D009348 2.5e-44 183.3 278 65.1
Eucgr.K00263 Eucalyptus grandis HOM05D000368 ORTHO05D009348 3.3e-44 183.0 282 66.3
PGR142G2510 Punica granatum HOM05D000368 ORTHO05D009348 3.6e-43 179.5 282 71.3
Thecc.03G177600 Theobroma cacao HOM05D000368 ORTHO05D009348 4.7e-43 179.1 286 66.4
Cc02_g02880 Coffea canephora HOM05D000368 ORTHO05D009348 5.2e-42 175.6 286 58.7
Glyma.20G159100 Glycine max HOM05D000368 ORTHO05D009348 4.9e-40 169.1 282 66.0
Prupe.2G295100 Prunus persica HOM05D000368 ORTHO05D009348 4.9e-40 169.1 285 57.5
Sc19g0001470 Simmondsia chinensis HOM05D000368 ORTHO05D009348 6.4e-40 168.7 282 68.4
RcHm_v2.0_Chr1g0377401 Rosa chinensis HOM05D000368 ORTHO05D009348 3.2e-39 166.4 284 57.4
Gohir.D12G258500 Gossypium hirsutum HOM05D000368 ORTHO05D009348 1.6e-38 164.1 282 59.2
Gorai.008G276900 Gossypium raimondii HOM05D000368 ORTHO05D009348 1.6e-38 164.1 282 59.2
ClCG05G008070 Citrullus lanatus HOM05D000368 ORTHO05D009348 2.1e-38 163.7 283 67.5
MD07G1269700 Malus domestica HOM05D000368 ORTHO05D009348 2.1e-38 163.7 284 57.0
MD01G1201700 Malus domestica HOM05D000368 ORTHO05D009348 2.7e-38 163.3 285 62.5
arahy.Tifrunner.gnm1.ann1.C4Z81U Arachis hypogaea HOM05D000368 ORTHO05D009348 3.5e-38 162.9 291 65.6
Gohir.A12G257200 Gossypium hirsutum HOM05D000368 ORTHO05D009348 1.3e-37 161.0 282 59.6
Lj5g0009535 Lotus japonicus HOM05D000368 ORTHO05D009348 2.3e-37 160.2 282 67.0
MSTRG.8734 Avicennia marina HOM05D000368 ORTHO05D009348 3.9e-37 159.5 281 66.9
MELO3C006911.2 Cucumis melo HOM05D000368 ORTHO05D009348 5.1e-37 159.1 241 71.0
arahy.Tifrunner.gnm1.ann1.HM7G91 Arachis hypogaea HOM05D000368 ORTHO05D009348 8.7e-37 158.3 291 64.6
vmacro09836 Vaccinium macrocarpon HOM05D000368 ORTHO05D000289 1.1e-36 157.9 285 47.4
CANSAT21G1838 Cannabis sativa HOM05D000368 ORTHO05D009348 1.5e-36 157.5 250 74.0
CsaV3_3G017130 Cucumis sativus L. HOM05D000368 ORTHO05D009348 1.9e-36 157.1 283 67.1
Hma1.2p1_0270F.1_g107970 Hydrangea macrophylla HOM05D000368 ORTHO05D009348 2.5e-36 156.8 287 64.5
Hund11743 Selenicereus undatus HOM05D000368 ORTHO05D009348 2.5e-36 156.8 286 62.2
Aa31LG3G8750 Aethionema arabicum HOM05D000368 ORTHO05D009348 3.3e-36 156.4 284 61.3
Lsat_1_v5_gn_2_132381 Lactuca sativa HOM05D000368 ORTHO05D009348 5.6e-36 155.6 282 66.0
Lalb_Chr21g0305051 Lupinus albus HOM05D000368 ORTHO05D009348 5.6e-36 155.6 285 63.2
Solyc03g025740.4 Solanum lycopersicum HOM05D000368 ORTHO05D009348 7.3e-36 155.2 286 64.0
Sopen03g004560 Solanum pennellii HOM05D000368 ORTHO05D009348 1.3e-35 154.5 286 63.3
Glyma.10G235200 Glycine max HOM05D000368 ORTHO05D009348 1.6e-35 154.1 283 65.0
Carub.0008s1248 Capsella rubella HOM05D000368 ORTHO05D009348 1.1e-34 151.4 302 59.3
PGSC0003DMG402014344 Solanum tuberosum HOM05D000368 ORTHO05D009348 1.8e-34 150.6 283 63.3
PSO782G2079 Papaver somniferum HOM05D000368 ORTHO05D009348 5.3e-34 149.1 284 62.3
AL8G26780 Arabidopsis lyrata HOM05D000368 ORTHO05D009348 6.9e-34 148.7 302 60.3
PSO063G1784 Papaver somniferum HOM05D000368 ORTHO05D009348 6.9e-34 148.7 292 59.6
DCAR_020244 Daucus carota HOM05D000368 ORTHO05D009348 1.5e-33 147.5 255 63.9
ECA238G2658 Erigeron canadensis HOM05D000368 ORTHO05D000289 1.5e-33 147.5 282 63.8
Psat0s3135g0040 Pisum sativum HOM05D000368 ORTHO05D009348 3.4e-33 146.4 283 61.1
VMungo0720G3173 Vigna mungo HOM05D000368 ORTHO05D009348 3.4e-33 146.4 295 57.3
FAN10G1532 Fragaria x ananassa HOM05D000368 ORTHO05D009348 4.4e-33 146.0 286 60.8
Ah.13g068650 Amaranthus hybridus HOM05D000368 ORTHO05D009348 7.6e-33 145.2 300 53.3
AT5G52380 Arabidopsis thaliana HOM05D000368 ORTHO05D009348 7.6e-33 145.2 303 57.8
FAN06G1486 Fragaria x ananassa HOM05D000368 ORTHO05D009348 7.6e-33 145.2 285 55.8
FAN06G0492 Fragaria x ananassa HOM05D000368 ORTHO05D009348 9.9e-33 144.8 285 55.8
Phvul.007G070700 Phaseolus vulgaris HOM05D000368 ORTHO05D009348 1.3e-32 144.4 257 58.8
Duzib205G0377 Durio zibethinus HOM05D000368 ORTHO05D000289 2.9e-32 143.3 268 61.2
Nn1g01474 Nelumbo nucifera HOM05D000368 ORTHO05D009348 1.1e-31 141.4 289 62.3
CARHR265330 Cardamine hirsuta HOM05D000368 ORTHO05D009348 1.4e-31 141.0 301 56.1
Sed0010584 Sechium edule HOM05D000368 ORTHO05D009348 1.9e-31 140.6 283 62.9
HanXRQChr07g0207001 Helianthus annuus HOM05D000368 ORTHO05D009348 5.4e-31 139.0 299 57.5
TPR.G27005 Trifolium pratense HOM05D000368 ORTHO05D009348 5.4e-31 139.0 296 44.3
Aqoxy5G04003 Aquilegia oxysepala HOM05D000368 ORTHO05D009348 7.1e-31 138.7 290 63.4
FAN10G1519 Fragaria x ananassa HOM05D000368 ORTHO05D009348 2.1e-30 137.1 281 59.8
Nitab4.5_0002117g0050 Nicotiana tabacum HOM05D000368 ORTHO05D009348 2.1e-30 137.1 319 48.9
EL10Ac3g05631 Beta vulgaris HOM05D000368 ORTHO05D009348 2.7e-30 136.7 283 57.2
SGA_v2.0_scaffold44G16725 Striga asiatica HOM05D000368 ORTHO05D009348 7.9e-30 135.2 288 59.4
CSS0028945 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 6.6e-29 132.1 151 70.9
CSS0042203 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 6.6e-29 132.1 151 66.9
FAN01G1188 Fragaria x ananassa HOM05D000368 ORTHO05D009348 3.3e-28 129.8 267 54.3
Ca_10757_v3 Cicer arietinum L. HOM05D000368 ORTHO05D009348 1.3e-27 127.9 279 37.6
Actinidia31822 Actinidia chinensis HOM05D000368 ORTHO05D009348 2.1e-27 127.1 155 73.5
AUR62015971 Chenopodium quinoa HOM05D000368 ORTHO05D009348 2.1e-27 127.1 237 64.6
MBI17_g19093_MAGBIO Magnolia biondii HOM05D000368 ORTHO05D009348 9.0e-26 121.7 307 49.2
Dinv28433 Davidia involucrata HOM05D000368 ORTHO05D009348 5.8e-25 119.0 129 69.0
Dinv24556 Davidia involucrata HOM05D000368 ORTHO05D009348 9.9e-25 118.2 160 71.9
Migut.F00336 Erythranthe guttata HOM05D000368 ORTHO05D009348 3.8e-24 116.3 283 61.8
ATR0680G368 Amborella trichopoda HOM05D000368 ORTHO05D009348 8.4e-24 115.2 289 64.4
Dinv24555 Davidia involucrata HOM05D000368 ORTHO05D009348 1.9e-23 114.0 104 66.3
Atru.BG.181.p Acer truncatum HOM05D000368 ORTHO05D009348 9.3e-23 111.7 102 61.8
Atru.chr1.452 Acer truncatum HOM05D000368 ORTHO05D009348 9.3e-23 111.7 102 61.8
Thhalv10014379m.g Eutrema salsugineum HOM05D000368 ORTHO05D009348 9.3e-23 111.7 285 59.6
Sp6g14600 Schrenkiella parvula HOM05D000368 ORTHO05D000289 2.1e-22 110.5 278 59.0
C03p18350 Brassica napus HOM05D000368 ORTHO05D000289 1.0e-21 108.2 297 54.5
HPP92_006518 Vanilla planifolia HOM05D000368 ORTHO05D009348 1.0e-21 108.2 285 55.1
A03p15700 Brassica napus HOM05D000368 ORTHO05D000289 3.0e-21 106.7 294 54.1
BolC3t14232H Brassica oleracea HOM05D000368 ORTHO05D000289 3.0e-21 106.7 293 54.3
Zm00001eb074410 Zea mays HOM05D000368 ORTHO05D009348 6.7e-21 105.5 287 53.3
BraA03t10861Z Brassica rapa HOM05D000368 ORTHO05D000289 1.9e-20 104.0 310 44.2
HPP92_018588 Vanilla planifolia HOM05D000368 ORTHO05D009348 1.9e-20 104.0 285 55.8
C09p41730 Brassica napus HOM05D000368 ORTHO05D000289 5.6e-20 102.4 104 61.5
FvH4_7g29542 Fragaria vesca HOM05D000368 ORTHO05D009348 9.6e-20 101.7 158 46.2
BolC9t57061H Brassica oleracea HOM05D000368 ORTHO05D009348 1.6e-19 100.9 303 49.2
Os04g0555800 Oryza sativa ssp. japonica HOM05D000368 ORTHO05D009348 8.4e-16 88.6 104 49.0
Dinv28434 Davidia involucrata HOM05D000368 ORTHO05D000289 2.1e-14 84.0 63 69.8
AagrBONN_evm.TU.Sc2ySwM_117.528 Anthoceros agrestis HOM05D000368 ORTHO05D009348 4.3e-12 76.3 207 54.6
Actinidia03122 Actinidia chinensis HOM05D000368 ORTHO05D009348 4.8e-11 72.8 54 64.8
Mapoly0006s0064 Marchantia polymorpha HOM05D000368 ORTHO05D009348 1.4e-10 71.2 102 51.0
SEGI_15321 Sequoiadendron giganteum HOM05D000368 ORTHO05D009348 1.4e-10 71.2 286 59.4
CSS0015725 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 4.5e-09 66.2 63 55.6
arahy.Tifrunner.gnm1.ann1.4PMG8D Arachis hypogaea HOM05D000368 ORTHO05D009348 7.6e-09 65.5 77 51.9
Pp3c16_20170 Physcomitrium patens HOM05D000368 ORTHO05D009348 2.9e-08 63.5 49 55.1
BraA10t43080Z Brassica rapa HOM05D000368 ORTHO05D009348 1.1e-07 61.6 38 63.2
Nitab4.5_0001842g0090 Nicotiana tabacum HOM05D000368 ORTHO05D009348 5.5e-07 59.3 284 34.2
A10p09970 Brassica napus HOM05D000368 ORTHO05D009348 3.5e-06 56.6 28 75.0


User provided reference genes

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