Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 5.8e-77 290.8 147 100.0
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 1.1e-67 260.0 142 94.4
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 1.6e-63 246.1 133 91.7
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 3.7e-63 245.0 132 93.2
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 1.1e-62 243.4 132 93.2
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 1.1e-62 243.4 132 93.2
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 2.0e-61 239.2 130 92.3
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 2.0e-61 239.2 130 92.3
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 2.0e-61 239.2 132 92.4
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 2.0e-61 239.2 132 90.9
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 2.0e-61 239.2 132 90.9
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 2.6e-61 238.8 132 92.4
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 7.6e-61 237.3 132 90.9
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 1.0e-60 236.9 132 90.9
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 1.4e-59 233.0 131 87.8
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 1.9e-59 232.6 133 90.2
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 4.2e-59 231.5 132 88.6
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 9.4e-59 230.3 132 87.9
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 9.4e-59 230.3 132 87.9
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 9.4e-59 230.3 131 87.8
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 1.2e-58 229.9 132 89.4
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 1.2e-58 229.9 132 88.6
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 1.6e-58 229.6 132 87.1
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 1.6e-58 229.6 132 87.1
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 2.1e-58 229.2 132 87.1
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 2.1e-58 229.2 132 86.4
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 2.7e-58 228.8 128 89.1
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 3.6e-58 228.4 145 81.4
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 3.6e-58 228.4 132 87.9
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 4.6e-58 228.0 132 86.4
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 4.6e-58 228.0 132 85.6
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 4.6e-58 228.0 133 87.2
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 4.6e-58 228.0 129 89.9
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 4.6e-58 228.0 132 89.4
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 6.1e-58 227.6 132 85.6
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 6.1e-58 227.6 130 86.9
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 7.9e-58 227.3 132 85.6
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 7.9e-58 227.3 130 87.7
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 1.0e-57 226.9 132 85.6
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 1.0e-57 226.9 134 87.3
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 1.0e-57 226.9 132 87.1
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 1.4e-57 226.5 132 88.6
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 1.4e-57 226.5 123 91.1
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 1.4e-57 226.5 134 88.1
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 1.8e-57 226.1 133 85.7
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 2.3e-57 225.7 132 85.6
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 3.0e-57 225.3 132 84.8
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 3.9e-57 224.9 131 88.5
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 5.1e-57 224.6 132 84.1
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 5.1e-57 224.6 132 85.6
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 6.7e-57 224.2 132 84.8
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 6.7e-57 224.2 133 88.0
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 8.8e-57 223.8 134 88.1
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 1.1e-56 223.4 132 84.8
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 1.1e-56 223.4 132 88.6
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 1.5e-56 223.0 132 84.8
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 1.9e-56 222.6 132 85.6
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 1.9e-56 222.6 132 84.8
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 1.9e-56 222.6 132 84.8
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 1.9e-56 222.6 132 84.8
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 1.9e-56 222.6 132 84.8
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 1.9e-56 222.6 132 84.8
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 2.5e-56 222.2 132 85.6
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 2.5e-56 222.2 130 86.2
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 3.3e-56 221.9 132 83.3
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 3.3e-56 221.9 146 82.2
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 4.3e-56 221.5 133 88.0
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 5.7e-56 221.1 132 84.8
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 5.7e-56 221.1 132 84.8
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 5.7e-56 221.1 134 85.8
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 7.4e-56 220.7 133 86.5
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 7.4e-56 220.7 133 85.0
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 7.4e-56 220.7 132 88.6
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.3e-55 219.9 143 81.1
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 1.7e-55 219.5 132 84.1
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.7e-55 219.5 133 87.2
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 1.7e-55 219.5 133 87.2
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 2.2e-55 219.2 132 86.4
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 3.7e-55 218.4 137 84.7
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 8.2e-55 217.2 133 85.0
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 1.1e-54 216.9 134 83.6
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 1.4e-54 216.5 134 84.3
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 1.4e-54 216.5 134 82.8
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 1.8e-54 216.1 134 85.8
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 2.4e-54 215.7 134 85.1
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 1.2e-53 213.4 136 83.1
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 1.2e-53 213.4 134 85.8
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 2.0e-53 212.6 134 83.6
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 2.6e-53 212.2 134 80.6
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 3.4e-53 211.8 133 84.2
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 3.4e-53 211.8 150 76.7
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 4.5e-53 211.5 170 67.6
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 4.5e-53 211.5 134 82.1
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 5.9e-53 211.1 134 82.1
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 1.0e-52 210.3 134 80.6
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 1.3e-52 209.9 136 84.6
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 2.9e-52 208.8 127 85.0
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 2.9e-52 208.8 133 82.7
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 8.5e-52 207.2 132 85.6
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 8.5e-52 207.2 133 84.2
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 8.5e-52 207.2 132 82.6
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 2.5e-51 205.7 133 82.7
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 2.5e-51 205.7 133 82.7
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 3.2e-51 205.3 148 79.1
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 5.5e-51 204.5 132 82.6
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 1.6e-50 203.0 131 80.2
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 2.7e-50 202.2 133 82.0
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 1.0e-49 200.3 132 78.8
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 1.4e-49 199.9 146 75.3
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 1.4e-49 199.9 134 78.4
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 2.3e-49 199.1 132 81.1
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 3.0e-49 198.7 146 74.7
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 3.9e-49 198.4 134 79.1
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 8.8e-49 197.2 132 78.0
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 1.1e-48 196.8 133 79.7
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 1.5e-48 196.4 137 80.3
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 2.6e-48 195.7 185 60.0
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 4.4e-48 194.9 138 77.5
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 4.4e-48 194.9 170 67.1
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 5.7e-48 194.5 131 77.9
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 5.7e-48 194.5 130 80.8
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 7.4e-48 194.1 133 78.9
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 7.4e-48 194.1 133 78.9
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 9.7e-48 193.7 132 78.8
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 1.7e-47 193.0 135 76.3
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 3.7e-47 191.8 130 79.2
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.1e-46 190.3 133 78.2
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 1.4e-46 189.9 135 74.8
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 3.1e-46 188.7 133 77.4
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 3.1e-46 188.7 133 77.4
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 3.1e-46 188.7 133 77.4
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 2.0e-45 186.0 132 78.0
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 2.6e-45 185.7 132 76.5
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 1.7e-44 183.0 130 75.4
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 3.8e-44 181.8 123 78.0
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 6.5e-44 181.0 133 75.2
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 1.9e-43 179.5 132 73.5
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 2.5e-43 179.1 135 73.3
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 3.2e-43 178.7 130 74.6
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 4.2e-43 178.3 115 82.6
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 7.2e-43 177.6 133 72.2
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 7.2e-43 177.6 134 76.1
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 9.4e-43 177.2 132 74.2
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 2.1e-42 176.0 132 72.7
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 2.7e-42 175.6 95 89.5
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 5.2e-41 171.4 133 72.2
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 6.7e-41 171.0 141 68.1
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 8.8e-41 170.6 122 76.2
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 2.0e-40 169.5 129 69.0
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 1.3e-39 166.8 128 72.7
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 1.4e-38 163.3 91 87.9
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 2.4e-38 162.5 121 77.7
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 5.3e-38 161.4 110 80.9
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 5.9e-37 157.9 111 76.6
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 1.0e-36 157.1 131 68.7
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 1.3e-36 156.8 110 78.2
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 5.0e-36 154.8 124 75.0
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 6.5e-36 154.5 112 75.9
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 2.3e-33 146.0 110 75.5
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 7.5e-32 141.0 82 81.7
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 3.1e-30 135.6 91 82.4
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 1.6e-29 133.3 120 63.3
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 2.0e-29 132.9 123 60.2
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 2.0e-29 132.9 86 81.4
MELO3C003707.2 Cucumis melo HOM05D003818 ORTHO05D004541 2.9e-28 129.0 130 56.9
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 5.5e-27 124.8 80 82.5
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 3.6e-26 122.1 76 84.2
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 8.0e-26 120.9 77 81.8
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 8.0e-26 120.9 69 82.6
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 2.3e-25 119.4 94 75.5
TAR374G0228 Trochodendron aralioides HOM05D003818 ORTHO05D004541 4.4e-24 115.2 118 56.8
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 5.7e-24 114.8 112 59.8
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 1.3e-23 113.6 87 74.7
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 1.7e-23 113.2 112 57.1
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 4.8e-23 111.7 132 53.8
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 8.3e-23 110.9 107 59.8
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 8.3e-23 110.9 107 59.8
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 7.2e-19 97.8 79 67.1
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 1.6e-18 96.7 121 51.2
Actinidia03108 Actinidia chinensis HOM05D003818 ORTHO05D054983 2.3e-17 92.8 45 91.1
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 1.5e-16 90.1 76 68.4
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 3.1e-09 65.9 35 94.3
DCAR_013632 Daucus carota HOM05D003818 ORTHO05D175173 3.2e-06 55.8 78 50.0


User provided reference genes

Program Settings