Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007919 Carpinus fangiana HOM05D006028 ORTHO05D007784 5.1e-210 734.2 377 100.0
Haze_14158 Corylus avellana HOM05D006028 ORTHO05D007784 6.7e-202 707.2 385 95.3
QL02p051229 Quercus lobata HOM05D006028 ORTHO05D007784 1.2e-179 633.3 376 85.1
CiPaw.03G061900 Carya illinoinensis HOM05D006028 ORTHO05D007784 1.5e-172 609.8 377 82.8
Prupe.3G142900 Prunus persica HOM05D006028 ORTHO05D007784 3.2e-151 538.9 380 73.7
Thecc.04G133100 Theobroma cacao HOM05D006028 ORTHO05D007784 2.7e-150 535.8 379 75.2
Manes.02G069100 Manihot esculenta HOM05D006028 ORTHO05D007784 1.3e-149 533.5 377 72.1
CANSAT78G1220 Cannabis sativa HOM05D006028 ORTHO05D007784 5.0e-149 531.6 377 74.3
TWI53G1478 Tripterygium wilfordii HOM05D006028 ORTHO05D007784 3.3e-148 528.9 378 72.2
Ciclev10011993m.g Citrus clementina HOM05D006028 ORTHO05D007784 1.6e-147 526.6 377 72.4
CSS0040274 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 2.9e-144 515.8 377 71.1
CSS0038458 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 8.3e-144 514.2 377 71.1
Gohir.D12G052100 Gossypium hirsutum HOM05D006028 ORTHO05D007784 7.8e-142 507.7 379 71.8
Gohir.A12G053400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.0e-141 507.3 379 71.5
TAR629G2682 Trochodendron aralioides HOM05D006028 ORTHO05D007784 1.0e-141 507.3 377 70.0
Gorai.008G055200 Gossypium raimondii HOM05D006028 ORTHO05D007784 1.3e-141 506.9 379 71.8
Hma1.2p1_1109F.1_g258060 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 1.3e-141 506.9 378 69.6
Atru.chr1.1685 Acer truncatum HOM05D006028 ORTHO05D007784 1.7e-141 506.5 377 70.3
Potri.004G099000 Populus trichocarpa HOM05D006028 ORTHO05D007784 2.3e-141 506.1 381 69.3
CsaV3_3G020280 Cucumis sativus L. HOM05D006028 ORTHO05D007784 2.5e-140 502.7 377 67.9
GSVIVG01031016001 Vitis vinifera HOM05D006028 ORTHO05D007784 2.8e-139 499.2 377 68.7
Rhsim10G0067700 Rhododendron simsii HOM05D006028 ORTHO05D007784 3.1e-138 495.7 377 69.0
COL.COLO4_09340 Corchorus olitorius HOM05D006028 ORTHO05D007784 5.8e-137 491.5 379 70.2
Actinidia15886 Actinidia chinensis HOM05D006028 ORTHO05D007784 2.2e-136 489.6 377 67.9
MELO3C023751.2 Cucumis melo HOM05D006028 ORTHO05D007784 2.9e-136 489.2 378 66.9
Lj2A441T56 Lonicera japonica HOM05D006028 ORTHO05D007784 3.7e-136 488.8 378 69.0
Duzib138G1322 Durio zibethinus HOM05D006028 ORTHO05D007784 6.4e-136 488.0 379 69.1
Glyma.14G193600 Glycine max HOM05D006028 ORTHO05D007784 8.3e-136 487.6 377 67.4
PGSC0003DMG400026405 Solanum tuberosum HOM05D006028 ORTHO05D007784 1.4e-135 486.9 377 65.5
Sopen02g030790 Solanum pennellii HOM05D006028 ORTHO05D007784 7.1e-135 484.6 377 65.5
RcHm_v2.0_Chr6g0273571 Rosa chinensis HOM05D006028 ORTHO05D007784 7.8e-134 481.1 375 67.5
Glyma.02G226700 Glycine max HOM05D006028 ORTHO05D007784 8.6e-133 477.6 378 67.2
Oeu008432.1 Olea europaea HOM05D006028 ORTHO05D007784 1.5e-132 476.9 377 66.8
Nitab4.5_0000912g0170 Nicotiana tabacum HOM05D006028 ORTHO05D007784 3.3e-132 475.7 377 64.7
CAN.G625.27 Capsicum annuum HOM05D006028 ORTHO05D007784 5.6e-132 474.9 377 65.0
FvH4_4g11350 Fragaria vesca HOM05D006028 ORTHO05D007784 1.2e-131 473.8 376 67.0
Nitab4.5_0004416g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 1.2e-131 473.8 377 64.5
TPR.G23017 Trifolium pratense HOM05D006028 ORTHO05D007784 6.2e-131 471.5 377 67.4
FAN07G0954 Fragaria x ananassa HOM05D006028 ORTHO05D007784 1.4e-130 470.3 376 66.5
ECA246G2307 Erigeron canadensis HOM05D006028 ORTHO05D007784 2.3e-130 469.5 377 64.2
Cc07_g08770 Coffea canephora HOM05D006028 ORTHO05D007784 6.8e-130 468.0 376 63.8
PGR004G1556 Punica granatum HOM05D006028 ORTHO05D007784 3.4e-129 465.7 377 65.8
VMungo0647G1142 Vigna mungo HOM05D006028 ORTHO05D007784 4.4e-129 465.3 377 65.3
Phvul.008G261300 Phaseolus vulgaris HOM05D006028 ORTHO05D007784 8.4e-128 461.1 377 65.0
Dinv34819 Davidia involucrata HOM05D006028 ORTHO05D007784 5.4e-127 458.4 377 66.6
Aqoxy4G02499 Aquilegia oxysepala HOM05D006028 ORTHO05D007784 6.0e-126 454.9 383 64.2
Eucgr.F02499 Eucalyptus grandis HOM05D006028 ORTHO05D007784 1.7e-125 453.4 348 67.2
ClCG05G012120 Citrullus lanatus HOM05D006028 ORTHO05D007784 2.3e-125 453.0 377 65.0
Medtr5g070860 Medicago truncatula HOM05D006028 ORTHO05D007784 8.6e-125 451.1 378 64.3
LjContig00155g0021894 Lotus japonicus HOM05D006028 ORTHO05D007784 1.1e-124 450.7 381 64.3
Hund13711 Selenicereus undatus HOM05D006028 ORTHO05D007784 2.1e-123 446.4 377 63.1
Lalb_Chr10g0103311 Lupinus albus HOM05D006028 ORTHO05D007784 4.4e-121 438.7 378 63.0
Sabra04G0080900 Salix brachista HOM05D006028 ORTHO05D007784 1.3e-120 437.2 382 62.0
AUR62023297 Chenopodium quinoa HOM05D006028 ORTHO05D007784 2.9e-120 436.0 383 62.4
PSO017G5051 Papaver somniferum HOM05D006028 ORTHO05D007784 3.2e-119 432.6 382 58.9
AT2G18410 Arabidopsis thaliana HOM05D006028 ORTHO05D007784 2.7e-118 429.5 381 61.2
EL10Ac2g04560 Beta vulgaris HOM05D006028 ORTHO05D007784 3.5e-118 429.1 377 60.7
HanXRQChr12g0375811 Helianthus annuus HOM05D006028 ORTHO05D007784 1.0e-117 427.6 377 59.7
Migut.H00221 Erythranthe guttata HOM05D006028 ORTHO05D007784 1.7e-117 426.8 377 59.2
Nn3g17886 Nelumbo nucifera HOM05D006028 ORTHO05D007784 2.3e-117 426.4 379 61.2
Lsat_1_v5_gn_3_79681 Lactuca sativa HOM05D006028 ORTHO05D007784 5.1e-117 425.2 377 59.7
PSO478G1932 Papaver somniferum HOM05D006028 ORTHO05D007784 1.1e-116 424.1 382 58.1
vmacro05550 Vaccinium macrocarpon HOM05D006028 ORTHO05D007784 5.6e-116 421.8 378 62.4
THA.LOC104820944 Tarenaya hassleriana HOM05D006028 ORTHO05D007784 4.8e-115 418.7 381 59.6
AL3G51690 Arabidopsis lyrata HOM05D006028 ORTHO05D007784 6.2e-115 418.3 381 60.1
Carub.0003s3256 Capsella rubella HOM05D006028 ORTHO05D007784 6.2e-115 418.3 381 60.4
MSTRG.17981 Avicennia marina HOM05D006028 ORTHO05D007784 1.1e-114 417.5 381 60.1
Sp3g31820 Schrenkiella parvula HOM05D006028 ORTHO05D007784 1.4e-114 417.2 381 59.3
SpUn0030_0010 Schrenkiella parvula HOM05D006028 ORTHO05D007784 1.4e-114 417.2 381 59.3
MD00G1149900 Malus domestica HOM05D006028 ORTHO05D007784 9.0e-114 414.5 340 66.5
arahy.Tifrunner.gnm1.ann1.QNRR2Z Arachis hypogaea HOM05D006028 ORTHO05D007784 1.5e-113 413.7 377 61.0
Thhalv10022737m.g Eutrema salsugineum HOM05D006028 ORTHO05D007784 2.6e-113 412.9 381 59.1
AUR62009005 Chenopodium quinoa HOM05D006028 ORTHO05D007784 7.6e-113 411.4 401 57.9
A07p02330 Brassica napus HOM05D006028 ORTHO05D007784 2.2e-112 409.8 385 57.9
SGA_v2.0_scaffold33G13509 Striga asiatica HOM05D006028 ORTHO05D007784 2.2e-112 409.8 379 57.5
SalBow3G3202 Salvia bowleyana HOM05D006028 ORTHO05D007784 4.9e-112 408.7 396 58.1
BcaC06g36407 Brassica carinata HOM05D006028 ORTHO05D007784 6.4e-112 408.3 381 57.5
BraA07t28024Z Brassica rapa HOM05D006028 ORTHO05D007784 1.9e-111 406.8 385 57.4
arahy.Tifrunner.gnm1.ann1.I9N3Y5 Arachis hypogaea HOM05D006028 ORTHO05D007784 2.1e-110 403.3 377 60.2
C07p04450 Brassica napus HOM05D006028 ORTHO05D007784 3.5e-110 402.5 385 57.1
BolC7t40839H Brassica oleracea HOM05D006028 ORTHO05D007784 6.0e-110 401.7 385 56.6
Haze_14159 Corylus avellana HOM05D006028 ORTHO05D007784 1.0e-109 401.0 225 94.7
BcaB03g16641 Brassica carinata HOM05D006028 ORTHO05D007784 1.3e-109 400.6 405 55.6
Aa31LG8G15620 Aethionema arabicum HOM05D006028 ORTHO05D007784 3.9e-109 399.1 382 56.8
ATR1125G043 Amborella trichopoda HOM05D006028 ORTHO05D007784 1.9e-108 396.7 390 53.8
CARHR109010 Cardamine hirsuta HOM05D006028 ORTHO05D007784 4.3e-108 395.6 382 57.9
Peaxi162Scf00394g00620 Petunia axillaris HOM05D006028 ORTHO05D007784 1.3e-107 394.0 377 57.8
HPP92_018993 Vanilla planifolia HOM05D006028 ORTHO05D007784 6.9e-106 388.3 381 54.3
Ah.16g101740 Amaranthus hybridus HOM05D006028 ORTHO05D007784 1.5e-105 387.1 377 54.9
Os03g0201700 Oryza sativa ssp. japonica HOM05D006028 ORTHO05D007784 1.9e-95 353.6 387 48.8
Zm00001eb007750 Zea mays HOM05D006028 ORTHO05D007784 1.6e-94 350.5 386 49.2
Sed0006429 Sechium edule HOM05D006028 ORTHO05D007784 2.5e-92 343.2 282 63.8
CDE05G1052 Ceratophyllum demersum HOM05D006028 ORTHO05D007784 4.5e-89 332.4 381 49.3
Psat0s2922g0040 Pisum sativum HOM05D006028 ORTHO05D007784 7.9e-86 321.6 261 63.6
Sc10g0001120 Simmondsia chinensis HOM05D006028 ORTHO05D007784 8.7e-85 318.2 273 60.4
Ca_05599_v3 Cicer arietinum L. HOM05D006028 ORTHO05D007784 1.9e-84 317.0 317 58.4
Hma1.2p1_1109F.1_g258050 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 1.8e-77 293.9 199 73.4
QL02p051191 Quercus lobata HOM05D006028 ORTHO05D007784 8.2e-75 285.0 170 84.7
Pp3c5_13580 Physcomitrium patens HOM05D006028 ORTHO05D007784 1.1e-68 264.6 389 40.4
Mapoly0156s0014 Marchantia polymorpha HOM05D006028 ORTHO05D007784 1.5e-63 247.7 389 38.6
RcHm_v2.0_Chr1g0332721 Rosa chinensis HOM05D006028 ORTHO05D007784 5.7e-60 235.7 178 67.4
SMO351G0506 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 1.7e-59 234.2 381 40.9
Potri.017G115566 Populus trichocarpa HOM05D006028 ORTHO05D007784 2.0e-57 227.3 166 68.1
Hma1.2p1_1109F.1_g258070 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 2.6e-52 210.3 169 66.9
Solyc02g086100.4 Solanum lycopersicum HOM05D006028 ORTHO05D007784 4.4e-52 209.5 168 66.7
SHI29124 Sapria himalayana HOM05D006028 ORTHO05D007784 9.8e-52 208.4 280 43.9
SMO009G0016 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 6.3e-51 205.7 378 38.6
SEGI_33346 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 3.2e-47 193.4 235 47.2
unitig_748.g7283 Utricularia gibba HOM05D006028 ORTHO05D007784 7.2e-47 192.2 380 35.8
Gorai.007G000700 Gossypium raimondii HOM05D006028 ORTHO05D007784 3.0e-45 186.8 161 64.6
Gohir.1Z049310 Gossypium hirsutum HOM05D006028 ORTHO05D007784 3.5e-41 173.3 189 53.4
Gohir.A09G249300 Gossypium hirsutum HOM05D006028 ORTHO05D007784 3.5e-41 173.3 189 52.9
FAN17G0046 Fragaria x ananassa HOM05D006028 ORTHO05D007784 1.0e-37 161.8 156 57.1
Sabra17G0095800 Salix brachista HOM05D006028 ORTHO05D007784 1.0e-37 161.8 169 58.0
Cpa.g.sc282.2 Carica papaya HOM05D006028 ORTHO05D007784 1.7e-35 154.5 159 53.5
Gohir.A06G000200 Gossypium hirsutum HOM05D006028 ORTHO05D007784 7.8e-25 119.0 91 65.9
Gohir.A12G000400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 7.8e-25 119.0 91 65.9
QL02p051195 Quercus lobata HOM05D006028 ORTHO05D007784 1.7e-24 117.9 72 77.8
AagrBONN_evm.TU.Sc2ySwM_368.1688 Anthoceros agrestis HOM05D006028 ORTHO05D007784 1.1e-21 108.6 142 49.3
AagrBONN_evm.TU.Sc2ySwM_368.1687 Anthoceros agrestis HOM05D006028 ORTHO05D007784 2.9e-19 100.5 165 30.9
Nitab4.5_0014016g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 7.1e-18 95.9 82 52.4
Gohir.A01G231820 Gossypium hirsutum HOM05D006028 ORTHO05D007784 2.1e-14 84.3 68 61.8
SEGI_36511 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 4.0e-13 80.1 84 52.4
CBR_g37698 Chara braunii HOM05D006028 ORTHO05D007784 2.3e-08 64.3 193 31.6
Gohir.D03G000201 Gossypium hirsutum HOM05D006028 ORTHO05D048139 5.6e-07 59.7 35 77.1
Gorai.003G000500 Gossypium raimondii HOM05D006028 ORTHO05D048139 5.6e-07 59.7 35 77.1


User provided reference genes

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