Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa007847 Carpinus fangiana HOM05D005540 ORTHO05D006932 2.2e-191 672.2 340 100.0
CiPaw.03G067900 Carya illinoinensis HOM05D005540 ORTHO05D006932 8.0e-170 600.5 338 88.8
Atru.chr4.1672 Acer truncatum HOM05D005540 ORTHO05D006932 6.8e-161 570.9 330 85.5
Dinv14871 Davidia involucrata HOM05D005540 ORTHO05D006932 8.8e-161 570.5 339 84.7
CSS0010845 Camellia sinensis var. sinensis HOM05D005540 ORTHO05D006932 3.4e-160 568.5 339 84.4
Manes.07G054300 Manihot esculenta HOM05D005540 ORTHO05D006932 3.7e-159 565.1 340 83.8
Lalb_Chr18g0053271 Lupinus albus HOM05D005540 ORTHO05D006932 8.3e-159 563.9 342 83.3
TAR629G0151 Trochodendron aralioides HOM05D005540 ORTHO05D006932 1.2e-157 560.1 334 83.2
TWI77G0639 Tripterygium wilfordii HOM05D005540 ORTHO05D006932 4.5e-157 558.1 329 84.5
Thecc.04G122100 Theobroma cacao HOM05D005540 ORTHO05D006932 2.2e-156 555.8 345 83.5
Ciclev10012086m.g Citrus clementina HOM05D005540 ORTHO05D006932 6.5e-156 554.3 340 83.5
Potri.017G129000 Populus trichocarpa HOM05D005540 ORTHO05D006932 3.2e-155 552.0 327 84.1
CANSAT78G2033 Cannabis sativa HOM05D005540 ORTHO05D006932 4.2e-155 551.6 325 85.2
Duzib138G0816 Durio zibethinus HOM05D005540 ORTHO05D006932 4.2e-155 551.6 341 83.6
TPR.G3482 Trifolium pratense HOM05D005540 ORTHO05D006932 9.4e-155 550.4 318 84.9
Solyc02g091340.4 Solanum lycopersicum HOM05D005540 ORTHO05D006932 5.2e-153 544.7 337 82.2
Sopen02g035960 Solanum pennellii HOM05D005540 ORTHO05D006932 5.2e-153 544.7 337 82.2
COL.COLO4_15705 Corchorus olitorius HOM05D005540 ORTHO05D006932 6.8e-153 544.3 307 87.6
vmacro18057 Vaccinium macrocarpon HOM05D005540 ORTHO05D006932 2.6e-152 542.3 326 82.2
VMungo1383G3344 Vigna mungo HOM05D005540 ORTHO05D006932 2.6e-152 542.3 341 80.1
Medtr5g079730 Medicago truncatula HOM05D005540 ORTHO05D006932 1.3e-151 540.0 325 81.8
THA.LOC104822414 Tarenaya hassleriana HOM05D005540 ORTHO05D006932 1.7e-151 539.7 328 81.7
Actinidia39198 Actinidia chinensis HOM05D005540 ORTHO05D006932 8.3e-151 537.3 329 82.7
Gohir.D11G168100 Gossypium hirsutum HOM05D005540 ORTHO05D006932 8.3e-151 537.3 308 86.7
Gorai.007G179400 Gossypium raimondii HOM05D005540 ORTHO05D006932 8.3e-151 537.3 308 86.7
LjContig00141g0003223 Lotus japonicus HOM05D005540 ORTHO05D006932 1.1e-150 537.0 316 83.9
RcHm_v2.0_Chr2g0122561 Rosa chinensis HOM05D005540 ORTHO05D006932 1.1e-150 537.0 314 85.4
Phvul.001G232200 Phaseolus vulgaris HOM05D005540 ORTHO05D006932 2.4e-150 535.8 341 80.1
Eucgr.F02818 Eucalyptus grandis HOM05D005540 ORTHO05D006932 3.1e-150 535.4 311 86.5
CsaV3_3G021680 Cucumis sativus L. HOM05D005540 ORTHO05D006932 7.0e-150 534.3 309 85.1
GSVIVG01030869001 Vitis vinifera HOM05D005540 ORTHO05D006932 7.0e-150 534.3 341 80.9
Aqoxy3G00138 Aquilegia oxysepala HOM05D005540 ORTHO05D006932 3.5e-149 531.9 309 86.1
Psat2g040920 Pisum sativum HOM05D005540 ORTHO05D006932 3.5e-149 531.9 325 80.9
Gohir.A11G161800 Gossypium hirsutum HOM05D005540 ORTHO05D006932 4.5e-149 531.6 308 86.4
Glyma.11G218700 Glycine max HOM05D005540 ORTHO05D006932 5.9e-149 531.2 326 81.0
MSTRG.23613 Avicennia marina HOM05D005540 ORTHO05D006932 1.0e-148 530.4 342 79.8
Nitab4.5_0004399g0070 Nicotiana tabacum HOM05D005540 ORTHO05D006932 1.7e-148 529.6 357 76.5
Ca_05867_v3 Cicer arietinum L. HOM05D005540 ORTHO05D006932 2.9e-148 528.9 309 83.5
Sed0009967 Sechium edule HOM05D005540 ORTHO05D006932 5.0e-148 528.1 308 84.7
Prupe.3G158100 Prunus persica HOM05D005540 ORTHO05D006932 6.6e-148 527.7 344 79.1
Glyma.18G038600 Glycine max HOM05D005540 ORTHO05D006932 8.6e-148 527.3 326 80.7
PGR004G0611 Punica granatum HOM05D005540 ORTHO05D006932 1.1e-147 526.9 334 79.6
ClCG05G010900 Citrullus lanatus HOM05D005540 ORTHO05D006932 3.3e-147 525.4 319 82.8
C04p44790 Brassica napus HOM05D005540 ORTHO05D006932 4.2e-147 525.0 318 82.7
ECA232G3523 Erigeron canadensis HOM05D005540 ORTHO05D006932 4.2e-147 525.0 307 84.4
BraA04t16769Z Brassica rapa HOM05D005540 ORTHO05D006932 1.2e-146 523.5 318 82.4
Migut.H00866 Erythranthe guttata HOM05D005540 ORTHO05D006932 1.2e-146 523.5 307 83.7
BcaB06g27151 Brassica carinata HOM05D005540 ORTHO05D006932 6.1e-146 521.2 317 82.3
BcaC02g09619 Brassica carinata HOM05D005540 ORTHO05D006932 8.0e-146 520.8 307 83.7
BolC4t26053H Brassica oleracea HOM05D005540 ORTHO05D006932 1.0e-145 520.4 319 82.4
A04p11070 Brassica napus HOM05D005540 ORTHO05D006932 3.0e-145 518.8 319 82.1
Cc07_g08210 Coffea canephora HOM05D005540 ORTHO05D006932 1.2e-144 516.9 323 80.5
CARHR214890 Cardamine hirsuta HOM05D005540 ORTHO05D006932 2.0e-144 516.2 325 79.7
Sp7g04170 Schrenkiella parvula HOM05D005540 ORTHO05D006932 2.6e-144 515.8 307 82.7
Carub.0007s3304 Capsella rubella HOM05D005540 ORTHO05D006932 9.8e-144 513.8 331 77.6
FAN28G0493 Fragaria x ananassa HOM05D005540 ORTHO05D006932 9.8e-144 513.8 377 72.7
Thhalv10027854m.g Eutrema salsugineum HOM05D005540 ORTHO05D006932 2.2e-143 512.7 307 82.1
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 2.8e-143 512.3 330 80.0
PSO017G2970 Papaver somniferum HOM05D005540 ORTHO05D006932 6.3e-143 511.1 314 81.2
AT5G37850 Arabidopsis thaliana HOM05D005540 ORTHO05D006932 8.3e-143 510.8 307 82.4
AL7G46750 Arabidopsis lyrata HOM05D005540 ORTHO05D006932 7.0e-142 507.7 307 82.1
Lj4A178T43 Lonicera japonica HOM05D005540 ORTHO05D006932 9.2e-142 507.3 344 77.9
Aa31LG9G17310 Aethionema arabicum HOM05D005540 ORTHO05D006932 7.8e-141 504.2 325 78.5
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea HOM05D005540 ORTHO05D006932 2.9e-140 502.3 316 80.4
Sed0014193 Sechium edule HOM05D005540 ORTHO05D006932 5.0e-140 501.5 310 81.0
ATR0686G023 Amborella trichopoda HOM05D005540 ORTHO05D006932 5.6e-139 498.0 329 76.3
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea HOM05D005540 ORTHO05D006932 5.6e-139 498.0 316 80.1
Zm00001eb135500 Zea mays HOM05D005540 ORTHO05D006932 8.0e-138 494.2 305 79.7
Sabra17G0107500 Salix brachista HOM05D005540 ORTHO05D006932 1.3e-135 486.9 331 75.8
Os12g0600400 Oryza sativa ssp. japonica HOM05D005540 ORTHO05D006932 1.7e-135 486.5 307 77.5
Dinv19006 Davidia involucrata HOM05D005540 ORTHO05D006932 8.3e-135 484.2 295 82.7
Duzib133G1255 Durio zibethinus HOM05D005540 ORTHO05D006932 3.5e-133 478.8 307 80.1
Nitab4.5_0002248g0040 Nicotiana tabacum HOM05D005540 ORTHO05D006932 5.0e-132 474.9 351 72.4
Lsat_1_v5_gn_4_154720 Lactuca sativa HOM05D005540 ORTHO05D006932 8.6e-132 474.2 344 72.1
EL10Ac2g04488 Beta vulgaris HOM05D005540 ORTHO05D006932 1.5e-131 473.4 316 77.5
MD12G1075700 Malus domestica HOM05D005540 ORTHO05D006932 2.5e-131 472.6 364 70.1
HPP92_024102 Vanilla planifolia HOM05D005540 ORTHO05D006932 2.3e-129 466.1 362 66.6
Rhsim08G0085100 Rhododendron simsii HOM05D005540 ORTHO05D006932 6.8e-129 464.5 499 54.5
SEGI_01535 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 3.4e-128 462.2 332 71.1
QL11p004195 Quercus lobata HOM05D005540 ORTHO05D006932 7.5e-128 461.1 634 46.5
FAN23G2620 Fragaria x ananassa HOM05D005540 ORTHO05D006932 9.8e-128 460.7 316 76.3
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 1.3e-127 460.3 317 73.5
CDE04G3097 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 6.4e-127 458.0 313 75.1
Peaxi162Scf00803g00528 Petunia axillaris HOM05D005540 ORTHO05D006932 1.9e-126 456.4 311 75.6
PSO478G5258 Papaver somniferum HOM05D005540 ORTHO05D006932 2.5e-123 446.0 259 84.6
Atru.BG.179.p Acer truncatum HOM05D005540 ORTHO05D006932 1.2e-122 443.7 309 77.0
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea HOM05D005540 ORTHO05D006932 2.3e-121 439.5 289 77.9
Lsat_1_v5_gn_0_4201 Lactuca sativa HOM05D005540 ORTHO05D006932 7.1e-118 427.9 280 78.9
Sed0021451 Sechium edule HOM05D005540 ORTHO05D006932 1.2e-117 427.2 306 71.2
Pp3c7_20600 Physcomitrium patens HOM05D005540 ORTHO05D006932 5.1e-116 421.8 307 68.7
Hma1.2p1_0283F.1_g113550 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 7.3e-115 417.9 329 69.0
SGA_v2.0_scaffold49G18144 Striga asiatica HOM05D005540 ORTHO05D006932 1.8e-113 413.3 252 81.3
Mapoly0043s0025 Marchantia polymorpha HOM05D005540 ORTHO05D006932 6.8e-113 411.4 313 65.5
CDE06G0494 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 2.6e-112 409.5 272 75.7
Sc14g0004860 Simmondsia chinensis HOM05D005540 ORTHO05D006932 2.6e-112 409.5 250 81.2
Ah.10g037980 Amaranthus hybridus HOM05D005540 ORTHO05D006932 4.4e-112 408.7 307 70.0
FvH4_1g24900 Fragaria vesca HOM05D005540 ORTHO05D006932 7.6e-112 407.9 227 89.0
Pp3c11_8570 Physcomitrium patens HOM05D005540 ORTHO05D006932 9.9e-112 407.5 308 65.9
SMO117G0213 Selaginella moellendorffii HOM05D005540 ORTHO05D006932 2.4e-105 386.3 296 63.5
SalBow3G0445 Salvia bowleyana HOM05D005540 ORTHO05D006932 3.2e-102 375.9 255 75.3
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis HOM05D005540 ORTHO05D006932 2.7e-101 372.9 262 68.3
MBI16_g05922_MAGBIO Magnolia biondii HOM05D005540 ORTHO05D006932 6.6e-100 368.2 244 77.0
DCAR_025877 Daucus carota HOM05D005540 ORTHO05D006932 1.3e-98 364.0 219 83.1
Nn4g24119 Nelumbo nucifera HOM05D005540 ORTHO05D006932 1.2e-96 357.5 339 58.1
HPP92_024131 Vanilla planifolia HOM05D005540 ORTHO05D006932 7.1e-94 348.2 223 76.7
Haze_14219 Corylus avellana HOM05D005540 ORTHO05D006932 7.9e-93 344.7 226 81.4
Sed0017329 Sechium edule HOM05D005540 ORTHO05D006932 2.3e-92 343.2 228 73.7
MCO05G093 Micromonas commoda HOM05D005540 ORTHO05D006932 3.8e-87 325.9 300 55.0
AUR62023244 Chenopodium quinoa HOM05D005540 ORTHO05D006932 1.4e-86 323.9 307 59.0
Hund16203 Selenicereus undatus HOM05D005540 ORTHO05D006932 2.7e-77 293.1 184 79.9
SGA_v2.0_scaffold6G03270 Striga asiatica HOM05D005540 ORTHO05D006932 1.8e-73 280.4 177 79.7
Cre03.g173800 Chlamydomonas reinhardtii HOM05D005540 ORTHO05D006932 1.0e-71 274.6 302 49.0
Migut.H00263 Erythranthe guttata HOM05D005540 ORTHO05D006932 1.1e-65 254.6 158 80.4
CBR_g12736 Chara braunii HOM05D005540 ORTHO05D006932 9.1e-65 251.5 155 77.4
FAN26G0473 Fragaria x ananassa HOM05D005540 ORTHO05D006932 5.9e-64 248.8 488 36.5
Oeu030810.1 Olea europaea HOM05D005540 ORTHO05D006932 6.5e-63 245.4 157 79.0
Cpa.g.sc116.26 Carica papaya HOM05D005540 ORTHO05D006932 6.3e-58 228.8 120 91.7
Cpa.g.sc116.24 Carica papaya HOM05D005540 ORTHO05D006932 8.2e-58 228.4 143 80.4
Nn3g18203 Nelumbo nucifera HOM05D005540 ORTHO05D006932 7.0e-57 225.3 120 90.0
Hund16202 Selenicereus undatus HOM05D005540 ORTHO05D006932 1.0e-47 194.9 228 50.9
SHI09520 Sapria himalayana HOM05D005540 ORTHO05D006932 6.5e-47 192.2 113 82.3
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 7.0e-41 172.2 270 34.8
Nn3g18202 Nelumbo nucifera HOM05D005540 ORTHO05D006932 3.2e-38 163.3 98 81.6
Haze_26639 Corylus avellana HOM05D005540 ORTHO05D006932 3.7e-34 149.8 288 34.4
Atru.chr4.2426 Acer truncatum HOM05D005540 ORTHO05D006932 9.5e-30 135.2 66 95.5
Cfa022314 Carpinus fangiana HOM05D005540 ORTHO05D006932 2.0e-27 127.5 326 28.5
MELO3C031731.2 Cucumis melo HOM05D005540 ORTHO05D006932 2.7e-24 117.1 63 88.9
FAN26G3341 Fragaria x ananassa HOM05D005540 ORTHO05D006932 4.6e-24 116.3 58 94.8
Hma1.2p1_0179F.1_g079120 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 3.0e-23 113.6 64 85.9
AUR62023196 Chenopodium quinoa HOM05D005540 ORTHO05D006932 3.9e-23 113.2 56 94.6
SalBow3G4194 Salvia bowleyana HOM05D005540 ORTHO05D006932 5.0e-23 112.8 93 69.9
MELO3C020384.2 Cucumis melo HOM05D005540 ORTHO05D006932 1.1e-22 111.7 70 75.7
SHI09525 Sapria himalayana HOM05D005540 ORTHO05D006932 1.5e-19 101.3 71 73.2
arahy.Tifrunner.gnm1.ann1.XYVL4V Arachis hypogaea HOM05D005540 ORTHO05D023714 4.4e-11 73.2 43 81.4
SEGI_04261 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 1.7e-10 71.2 45 73.3
Hma1.2p1_0179F.1_g079130 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 2.2e-10 70.9 33 93.9
SHI09501 Sapria himalayana HOM05D005540 ORTHO05D006932 1.6e-08 64.7 55 60.0


User provided reference genes

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