Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa006713 Carpinus fangiana HOM05D006608 ORTHO05D008316 3.0e-151 538.5 271 100.0
Haze_04048 Corylus avellana HOM05D006608 ORTHO05D008316 3.6e-141 505.0 300 87.3
CiPaw.08G154200 Carya illinoinensis HOM05D006608 ORTHO05D008316 1.4e-121 439.9 283 81.6
QL03p016892 Quercus lobata HOM05D006608 ORTHO05D008316 1.7e-114 416.4 256 83.6
Potri.005G010700 Populus trichocarpa HOM05D006608 ORTHO05D008316 4.3e-110 401.7 275 77.8
Duzib177G0608 Durio zibethinus HOM05D006608 ORTHO05D008316 4.0e-108 395.2 279 76.7
Thecc.05G325800 Theobroma cacao HOM05D006608 ORTHO05D008316 4.0e-108 395.2 269 78.4
Sabra05G0019000 Salix brachista HOM05D006608 ORTHO05D008316 4.5e-107 391.7 275 75.6
Manes.08G109600 Manihot esculenta HOM05D006608 ORTHO05D008316 7.6e-107 391.0 273 75.8
Potri.013G006500 Populus trichocarpa HOM05D006608 ORTHO05D008316 1.7e-106 389.8 275 76.4
Sabra05G0007800 Salix brachista HOM05D006608 ORTHO05D008316 2.2e-106 389.4 271 76.8
GSVIVG01031268001 Vitis vinifera HOM05D006608 ORTHO05D008316 2.2e-106 389.4 230 84.8
Sabra13G0005500 Salix brachista HOM05D006608 ORTHO05D008316 1.1e-105 387.1 273 76.2
CSS0011542 Camellia sinensis var. sinensis HOM05D006608 ORTHO05D008316 1.4e-105 386.7 224 87.1
Actinidia35508 Actinidia chinensis HOM05D006608 ORTHO05D008316 2.1e-104 382.9 269 74.0
COL.COLO4_05523 Corchorus olitorius HOM05D006608 ORTHO05D008316 2.3e-103 379.4 219 86.8
PGR031G0497 Punica granatum HOM05D006608 ORTHO05D008316 2.3e-103 379.4 276 74.3
Gohir.A13G176500 Gossypium hirsutum HOM05D006608 ORTHO05D008316 1.1e-102 377.1 270 75.2
Gorai.013G208300 Gossypium raimondii HOM05D006608 ORTHO05D008316 1.1e-102 377.1 270 74.8
Eucgr.H01287 Eucalyptus grandis HOM05D006608 ORTHO05D008316 4.8e-101 371.7 216 84.7
TWI12G0784 Tripterygium wilfordii HOM05D006608 ORTHO05D008316 1.4e-100 370.2 276 72.1
CANSAT54G1874 Cannabis sativa HOM05D006608 ORTHO05D008316 1.8e-100 369.8 257 76.3
Prupe.6G309700 Prunus persica HOM05D006608 ORTHO05D008316 6.9e-100 367.9 217 85.3
Sed0000881 Sechium edule HOM05D006608 ORTHO05D008316 6.9e-100 367.9 277 71.5
Ciclev10002108m.g Citrus clementina HOM05D006608 ORTHO05D008316 2.0e-99 366.3 213 85.4
TAR362G0553 Trochodendron aralioides HOM05D006608 ORTHO05D008316 2.6e-99 365.9 229 79.9
Cc02_g35130 Coffea canephora HOM05D006608 ORTHO05D008316 3.4e-99 365.5 233 78.1
THA.LOC104820562 Tarenaya hassleriana HOM05D006608 ORTHO05D008316 4.5e-99 365.2 280 71.4
HanXRQChr09g0247441 Helianthus annuus HOM05D006608 ORTHO05D008316 1.0e-98 364.0 228 80.7
vmacro01585 Vaccinium macrocarpon HOM05D006608 ORTHO05D008316 2.2e-98 362.8 279 69.5
Lj2g0018741 Lotus japonicus HOM05D006608 ORTHO05D008316 2.9e-98 362.5 217 83.9
ClCG01G010870 Citrullus lanatus HOM05D006608 ORTHO05D008316 3.8e-98 362.1 275 71.6
MD04G1191200 Malus domestica HOM05D006608 ORTHO05D008316 8.5e-98 360.9 220 82.7
MD12G1203800 Malus domestica HOM05D006608 ORTHO05D008316 8.5e-98 360.9 220 82.7
ECA240G1520 Erigeron canadensis HOM05D006608 ORTHO05D008316 2.5e-97 359.4 224 79.0
Glyma.03G230300 Glycine max HOM05D006608 ORTHO05D008316 2.5e-97 359.4 246 76.0
Hund21858 Selenicereus undatus HOM05D006608 ORTHO05D008316 3.6e-96 355.5 223 79.4
Lalb_Chr04g0260371 Lupinus albus HOM05D006608 ORTHO05D008316 4.6e-96 355.1 227 79.3
Dinv30914 Davidia involucrata HOM05D006608 ORTHO05D008316 6.1e-96 354.8 205 85.9
Ah.04g158480 Amaranthus hybridus HOM05D006608 ORTHO05D008316 7.9e-96 354.4 223 78.0
CsaV3_1G015710 Cucumis sativus L. HOM05D006608 ORTHO05D008316 1.0e-95 354.0 268 71.3
PSO210G3601 Papaver somniferum HOM05D006608 ORTHO05D008316 1.0e-95 354.0 230 77.0
Lsat_1_v5_gn_7_65241 Lactuca sativa HOM05D006608 ORTHO05D008316 1.4e-95 353.6 228 77.2
Phvul.001G224100 Phaseolus vulgaris HOM05D006608 ORTHO05D008316 1.8e-95 353.2 268 72.4
PSO761G0023 Papaver somniferum HOM05D006608 ORTHO05D008316 6.7e-95 351.3 230 76.5
MBI18_g27388_MAGBIO Magnolia biondii HOM05D006608 ORTHO05D008316 1.1e-94 350.5 285 67.4
VMungo1383G0735 Vigna mungo HOM05D006608 ORTHO05D008316 1.5e-94 350.1 215 81.9
MSTRG.16414 Avicennia marina HOM05D006608 ORTHO05D008316 1.9e-94 349.7 230 76.5
Gohir.D13G182950 Gossypium hirsutum HOM05D006608 ORTHO05D008316 1.9e-94 349.7 270 71.1
SGA_v2.0_scaffold4G01979 Striga asiatica HOM05D006608 ORTHO05D008316 2.5e-94 349.4 216 81.0
Migut.B00927 Erythranthe guttata HOM05D006608 ORTHO05D008316 3.3e-94 349.0 224 78.6
Peaxi162Scf00299g00341 Petunia axillaris HOM05D006608 ORTHO05D008316 4.3e-94 348.6 218 79.8
RcHm_v2.0_Chr3g0457591 Rosa chinensis HOM05D006608 ORTHO05D008316 4.3e-94 348.6 216 79.2
Ca_09291_v3 Cicer arietinum L. HOM05D006608 ORTHO05D008316 5.7e-94 348.2 250 72.8
EL10Ac4g09502 Beta vulgaris HOM05D006608 ORTHO05D008316 7.4e-94 347.8 257 70.8
FAN02G2060 Fragaria x ananassa HOM05D006608 ORTHO05D008316 7.4e-94 347.8 216 78.7
DCAR_002111 Daucus carota HOM05D006608 ORTHO05D008316 9.7e-94 347.4 218 78.9
CAN.G504.78 Capsicum annuum HOM05D006608 ORTHO05D008316 1.7e-93 346.7 214 80.8
FAN14G1365 Fragaria x ananassa HOM05D006608 ORTHO05D008316 1.7e-93 346.7 216 78.7
Rhsim11G0098400 Rhododendron simsii HOM05D006608 ORTHO05D008316 1.7e-93 346.7 297 65.0
arahy.Tifrunner.gnm1.ann1.V41D0B Arachis hypogaea HOM05D006608 ORTHO05D008316 2.2e-93 346.3 243 74.9
arahy.Tifrunner.gnm1.ann1.7ZK9KC Arachis hypogaea HOM05D006608 ORTHO05D008316 2.8e-93 345.9 243 74.9
Nn4g25453 Nelumbo nucifera HOM05D006608 ORTHO05D008316 3.7e-93 345.5 276 67.4
Sopen01g048480 Solanum pennellii HOM05D006608 ORTHO05D008316 4.8e-93 345.1 215 80.0
AUR62006773 Chenopodium quinoa HOM05D006608 ORTHO05D008316 6.3e-93 344.7 221 76.9
FAN09G0299 Fragaria x ananassa HOM05D002543 ORTHO05D002990 1.1e-92 344.0 215 78.6
Nitab4.5_0005908g0020 Nicotiana tabacum HOM05D006608 ORTHO05D008316 1.1e-92 344.0 218 78.9
FAN05G5720 Fragaria x ananassa HOM05D006608 ORTHO05D008316 1.4e-92 343.6 216 78.7
arahy.Tifrunner.gnm1.ann1.0RV1NN Arachis hypogaea HOM05D006608 ORTHO05D008316 1.8e-92 343.2 216 78.7
Solyc01g106090.3 Solanum lycopersicum HOM05D006608 ORTHO05D008316 1.8e-92 343.2 215 79.5
Lj9A306T68 Lonicera japonica HOM05D006608 ORTHO05D008316 2.4e-92 342.8 205 82.9
MELO3C026109.2 Cucumis melo HOM05D006608 ORTHO05D008316 4.1e-92 342.0 205 83.4
PGSC0003DMG400010682 Solanum tuberosum HOM05D006608 ORTHO05D008316 4.1e-92 342.0 215 79.1
arahy.Tifrunner.gnm1.ann1.FYW6BY Arachis hypogaea HOM05D006608 ORTHO05D008316 5.3e-92 341.7 216 78.2
SalBow5G2350 Salvia bowleyana HOM05D006608 ORTHO05D008316 5.3e-92 341.7 220 77.3
Cpa.g.sc48.186 Carica papaya HOM05D006608 ORTHO05D008316 6.9e-92 341.3 216 80.6
Aqoxy2G02631 Aquilegia oxysepala HOM05D006608 ORTHO05D008316 2.0e-91 339.7 232 74.6
C01p27450 Brassica napus HOM05D006608 ORTHO05D008316 5.9e-91 338.2 203 83.3
Psat3g014240 Pisum sativum HOM05D006608 ORTHO05D008316 5.9e-91 338.2 235 73.6
Nitab4.5_0002750g0060 Nicotiana tabacum HOM05D006608 ORTHO05D008316 7.7e-91 337.8 218 77.5
Medtr7g111880 Medicago truncatula HOM05D006608 ORTHO05D008316 1.3e-90 337.0 247 72.1
CDE01G0267 Ceratophyllum demersum HOM05D006608 ORTHO05D008316 2.9e-90 335.9 211 77.7
Thhalv10025982m.g Eutrema salsugineum HOM05D006608 ORTHO05D008316 6.5e-90 334.7 262 69.1
TPR.G1650 Trifolium pratense HOM05D006608 ORTHO05D008316 8.5e-90 334.3 247 71.3
A08p11770 Brassica napus HOM05D006608 ORTHO05D008316 3.2e-89 332.4 217 78.8
BraA08t33169Z Brassica rapa HOM05D006608 ORTHO05D008316 3.2e-89 332.4 217 78.8
A01p22060 Brassica napus HOM05D006608 ORTHO05D008316 4.2e-89 332.0 226 75.2
BcaC09g50245 Brassica carinata HOM05D006608 ORTHO05D008316 9.4e-89 330.9 220 77.3
CDE12G0684 Ceratophyllum demersum HOM05D006608 ORTHO05D008316 6.1e-88 328.2 207 77.3
FvH4_6g07900 Fragaria vesca HOM05D006608 ORTHO05D008316 7.9e-88 327.8 205 78.0
BcaC07g37888 Brassica carinata HOM05D006608 ORTHO05D008316 1.0e-87 327.4 217 77.4
BolC8t48283H Brassica oleracea HOM05D006608 ORTHO05D008316 2.3e-87 326.2 270 67.0
ATR0706G264 Amborella trichopoda HOM05D006608 ORTHO05D008316 6.7e-87 324.7 187 85.0
BolC1t02685H Brassica oleracea HOM05D006608 ORTHO05D008316 6.7e-87 324.7 272 65.1
CARHR222300 Cardamine hirsuta HOM05D006608 ORTHO05D008316 5.7e-86 321.6 258 67.4
AL7G40010 Arabidopsis lyrata HOM05D006608 ORTHO05D008316 1.7e-85 320.1 258 67.4
Sp7g13760 Schrenkiella parvula HOM05D006608 ORTHO05D008316 1.7e-85 320.1 262 67.9
Carub.0007s2637 Capsella rubella HOM05D006608 ORTHO05D008316 2.8e-85 319.3 225 73.3
Aa31LG2G11410 Aethionema arabicum HOM05D006608 ORTHO05D008316 3.7e-85 318.9 288 62.5
Os07g0275100 Oryza sativa ssp. japonica HOM05D006608 ORTHO05D008316 1.4e-84 317.0 215 74.9
AT4G15510 Arabidopsis thaliana HOM05D006608 ORTHO05D008316 1.8e-84 316.6 203 78.3
BcaNung00268 Brassica carinata HOM05D006608 ORTHO05D008316 1.8e-84 316.6 260 68.5
Zm00001eb028550 Zea mays HOM05D006608 ORTHO05D008316 4.1e-84 315.5 211 75.4
BcaB04g18298 Brassica carinata HOM05D006608 ORTHO05D008316 2.6e-83 312.8 178 86.0
unitig_0.g2226 Utricularia gibba HOM05D006608 ORTHO05D008316 1.6e-80 303.5 220 69.1
BcaC09g50241 Brassica carinata HOM05D006608 ORTHO05D008316 1.3e-77 293.9 261 63.6
SEGI_38534 Sequoiadendron giganteum HOM05D006608 ORTHO05D008316 1.8e-76 290.0 212 65.6
Oeu019844.1 Olea europaea HOM05D006608 ORTHO05D008316 8.0e-72 274.6 204 70.6
Mapoly0002s0119 Marchantia polymorpha HOM05D006608 ORTHO05D008316 3.0e-71 272.7 212 63.2
Pp3c25_7030 Physcomitrium patens HOM05D006608 ORTHO05D008316 3.5e-67 259.2 215 61.9
SMO203G0012 Selaginella moellendorffii HOM05D006608 ORTHO05D008316 2.3e-63 246.5 179 63.7
CBR_g54968 Chara braunii HOM05D006608 ORTHO05D008316 3.3e-57 226.1 180 59.4
Sc09g0002570 Simmondsia chinensis HOM05D006608 ORTHO05D008316 8.3e-53 211.5 132 78.0
Os12g0564400 Oryza sativa ssp. japonica HOM05D006608 ORTHO05D008316 6.1e-48 195.3 149 65.8
Cre08.g362900 Chlamydomonas reinhardtii HOM05D006608 ORTHO05D008316 1.0e-47 194.5 233 46.4
AUR62000427 Chenopodium quinoa HOM05D006608 ORTHO05D008316 1.5e-46 190.7 111 83.8
MCO08G333 Micromonas commoda HOM05D006608 ORTHO05D008316 2.5e-41 173.3 251 41.0
PRCOL_00003409 Prasinoderma coloniale HOM05D006608 ORTHO05D008316 1.1e-23 114.8 190 35.8
Glyma.19G227402 Glycine max HOM05D006608 ORTHO05D008316 1.5e-22 110.9 78 71.8
Os07g0275901 Oryza sativa ssp. japonica HOM05D006608 ORTHO05D008316 2.9e-21 106.7 75 74.7
Os07g0275801 Oryza sativa ssp. japonica HOM05D006608 ORTHO05D008316 5.1e-18 95.9 56 80.4
HPP92_017019 Vanilla planifolia HOM05D002543 ORTHO05D002990 2.7e-11 73.6 65 58.5
TAR633G0622 Trochodendron aralioides HOM05D006608 ORTHO05D008316 4.6e-11 72.8 113 39.8
TWI15G0569 Tripterygium wilfordii HOM05D002933 ORTHO05D007742 1.6e-08 64.3 208 26.9
GSVIVG01016616001 Vitis vinifera HOM05D002933 ORTHO05D009221 3.6e-08 63.2 227 23.8
Eucgr.L03253 Eucalyptus grandis HOM05D002933 ORTHO05D009221 1.4e-07 61.2 228 24.1
Lj5g0017951 Lotus japonicus HOM05D002933 ORTHO05D009221 1.8e-07 60.8 231 22.9
MD07G1191200 Malus domestica HOM05D002933 ORTHO05D009221 2.4e-07 60.5 235 22.1
Aqoxy4G03026 Aquilegia oxysepala HOM05D002933 ORTHO05D009221 4.0e-07 59.7 221 23.1
CANSAT56G4077 Cannabis sativa HOM05D002933 ORTHO05D009221 4.0e-07 59.7 227 23.8
Rhsim03G0127300 Rhododendron simsii HOM05D002933 ORTHO05D009221 4.0e-07 59.7 177 26.6
MD01G1121500 Malus domestica HOM05D002933 ORTHO05D009221 5.3e-07 59.3 226 22.1
Medtr1g115410 Medicago truncatula HOM05D002933 ORTHO05D009221 5.3e-07 59.3 178 25.3
SEGI_20505 Sequoiadendron giganteum HOM05D002933 ORTHO05D009221 5.3e-07 59.3 177 28.2
TPR.G13990 Trifolium pratense HOM05D002933 ORTHO05D009221 6.9e-07 58.9 222 22.5
CsaV3_5G026270 Cucumis sativus L. HOM05D002933 ORTHO05D009221 1.5e-06 57.8 177 25.4
Mapoly0092s0016 Marchantia polymorpha HOM05D007200 ORTHO05D009030 1.5e-06 57.8 225 24.0
Duzib114G0802 Durio zibethinus HOM05D002933 ORTHO05D009221 2.0e-06 57.4 178 25.8
Nn3g20127 Nelumbo nucifera HOM05D002933 ORTHO05D009221 2.0e-06 57.4 184 26.1
SEGI_36156 Sequoiadendron giganteum HOM05D002933 ORTHO05D007742 2.0e-06 57.4 267 24.7
Eucgr.G02907 Eucalyptus grandis HOM05D002933 ORTHO05D009221 2.6e-06 57.0 228 23.2
PGR142G1118 Punica granatum HOM05D002933 ORTHO05D009221 2.6e-06 57.0 178 24.2
Cpa.g.sc1.348 Carica papaya HOM05D002933 ORTHO05D009221 3.4e-06 56.6 227 24.2
Ciclev10032629m.g Citrus clementina HOM05D002933 ORTHO05D009221 7.6e-06 55.5 175 25.1
Glyma.20G098500 Glycine max HOM05D002933 ORTHO05D009221 7.6e-06 55.5 224 22.8
Lalb_Chr21g0307341 Lupinus albus HOM05D002933 ORTHO05D009221 7.6e-06 55.5 176 25.0
Phvul.007G010700 Phaseolus vulgaris HOM05D002933 ORTHO05D009221 7.6e-06 55.5 241 22.4
TAR369G0833 Trochodendron aralioides HOM05D002933 ORTHO05D009221 7.6e-06 55.5 176 24.4
MELO3C025467.2 Cucumis melo HOM05D002933 ORTHO05D009221 9.9e-06 55.1 177 24.9
Prupe.2G229200 Prunus persica HOM05D002933 ORTHO05D009221 9.9e-06 55.1 180 25.0


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