Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa006455 Carpinus fangiana HOM05D005190 ORTHO05D006183 1.3e-73 279.6 138 100.0
Haze_00795 Corylus avellana HOM05D005582 ORTHO05D007028 1.7e-70 269.2 138 95.7
CiPaw.01G130900 Carya illinoinensis HOM05D005190 ORTHO05D006183 4.3e-66 254.6 138 87.7
QL06p013825 Quercus lobata HOM05D005190 ORTHO05D006183 2.2e-62 242.3 132 86.4
Duzib235G0490 Durio zibethinus HOM05D005190 ORTHO05D006183 8.5e-62 240.4 135 85.9
Thecc.06G136600 Theobroma cacao HOM05D005190 ORTHO05D006183 2.7e-60 235.3 134 84.3
CSS0027522 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 3.0e-59 231.9 136 82.4
CSS0047604 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 3.0e-59 231.9 136 82.4
MELO3C006747.2 Cucumis melo HOM05D005190 ORTHO05D006183 3.0e-59 231.9 134 84.3
CsaV3_4G025830 Cucumis sativus L. HOM05D005190 ORTHO05D006183 8.8e-59 230.3 135 83.7
CsaV3_3G015480 Cucumis sativus L. HOM05D005190 ORTHO05D006183 1.5e-58 229.6 134 82.8
Oeu009981.1 Olea europaea HOM05D005190 ORTHO05D006183 1.5e-58 229.6 134 82.8
GSVIVG01017663001 Vitis vinifera HOM05D005190 ORTHO05D006183 1.5e-58 229.6 137 79.6
Dinv09552 Davidia involucrata HOM05D005190 ORTHO05D006183 2.0e-58 229.2 137 81.0
Dinv10386 Davidia involucrata HOM05D005190 ORTHO05D006183 2.0e-58 229.2 137 81.0
Sabra15G0031200 Salix brachista HOM05D005190 ORTHO05D006183 4.4e-58 228.0 138 80.4
CANSAT35G0272 Cannabis sativa HOM05D005190 ORTHO05D006183 7.4e-58 227.3 134 79.9
Gohir.D06G202900 Gossypium hirsutum HOM05D005190 ORTHO05D006183 9.7e-58 226.9 136 81.6
Gorai.010G236800 Gossypium raimondii HOM05D005190 ORTHO05D006183 9.7e-58 226.9 136 81.6
Actinidia01056 Actinidia chinensis HOM05D005190 ORTHO05D006183 2.2e-57 225.7 135 81.5
Potri.015G036700 Populus trichocarpa HOM05D005190 ORTHO05D006183 2.2e-57 225.7 138 79.7
Sed0026997 Sechium edule HOM05D005190 ORTHO05D006183 2.2e-57 225.7 134 82.1
MSTRG.12184 Avicennia marina HOM05D005190 ORTHO05D006183 2.8e-57 225.3 133 82.7
ClCG04G007440 Citrullus lanatus HOM05D005190 ORTHO05D006183 2.8e-57 225.3 135 81.5
Duzib192G0082 Durio zibethinus HOM05D005190 ORTHO05D006183 2.8e-57 225.3 135 81.5
Gohir.A06G195300 Gossypium hirsutum HOM05D005190 ORTHO05D006183 2.8e-57 225.3 136 81.6
Potri.012G045500 Populus trichocarpa HOM05D005190 ORTHO05D006183 2.8e-57 225.3 138 79.0
GSVIVG01017602001 Vitis vinifera HOM05D005190 ORTHO05D006183 2.8e-57 225.3 137 78.8
TAR636G2254 Trochodendron aralioides HOM05D005190 ORTHO05D006183 3.7e-57 224.9 138 80.4
Cc07_g19070 Coffea canephora HOM05D005190 ORTHO05D006183 6.3e-57 224.2 134 80.6
COL.COLO4_30940 Corchorus olitorius HOM05D005190 ORTHO05D006183 1.4e-56 223.0 145 79.3
TAR629G3462 Trochodendron aralioides HOM05D005190 ORTHO05D006183 1.8e-56 222.6 136 78.7
RcHm_v2.0_Chr4g0426821 Rosa chinensis HOM05D005190 ORTHO05D006183 2.4e-56 222.2 133 79.7
MBI19_g06603_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 3.1e-56 221.9 134 79.9
DCAR_006510 Daucus carota HOM05D005190 ORTHO05D006183 4.1e-56 221.5 134 76.1
Rhsim04G0247000 Rhododendron simsii HOM05D005190 ORTHO05D006183 5.3e-56 221.1 135 80.7
FAN07G0799 Fragaria x ananassa HOM05D005190 ORTHO05D006183 9.1e-56 220.3 133 79.7
Ca_02362_v3 Cicer arietinum L. HOM05D005190 ORTHO05D006183 1.5e-55 219.5 139 77.7
TWI38G0007 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 1.5e-55 219.5 138 77.5
Nn3g18945 Nelumbo nucifera HOM05D005190 ORTHO05D006183 2.0e-55 219.2 138 78.3
Prupe.8G102200 Prunus persica HOM05D005190 ORTHO05D006183 2.6e-55 218.8 134 80.6
SGA_v2.0_scaffold36G14289 Striga asiatica HOM05D005190 ORTHO05D006183 3.5e-55 218.4 133 78.9
FAN17G1108 Fragaria x ananassa HOM05D000385 ORTHO05D006183 4.5e-55 218.0 131 79.4
PGR044G0309 Punica granatum HOM05D005190 ORTHO05D006183 4.5e-55 218.0 135 79.3
Glyma.16G146000 Glycine max HOM05D005190 ORTHO05D006183 5.9e-55 217.6 134 79.1
PGSC0003DMG400012133 Solanum tuberosum HOM05D005190 ORTHO05D006183 7.7e-55 217.2 134 79.1
FvH4_4g21210 Fragaria vesca HOM05D005190 ORTHO05D006183 1.0e-54 216.9 133 78.2
FAN12G1005 Fragaria x ananassa HOM05D005190 ORTHO05D006183 1.0e-54 216.9 133 78.2
Sabra12G0031600 Salix brachista HOM05D005190 ORTHO05D006183 1.0e-54 216.9 138 77.5
Glyma.02G064900 Glycine max HOM05D005190 ORTHO05D006183 1.3e-54 216.5 136 77.9
Hma1.2p1_0013F.1_g007820 Hydrangea macrophylla HOM05D005190 ORTHO05D006183 1.3e-54 216.5 135 77.8
Phvul.004G071200 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 1.3e-54 216.5 134 78.4
Lalb_Chr07g0181821 Lupinus albus HOM05D005190 ORTHO05D006183 2.2e-54 215.7 135 77.0
Peaxi162Scf00074g00538 Petunia axillaris HOM05D005190 ORTHO05D006183 2.9e-54 215.3 135 80.7
Lalb_Chr13g0298851 Lupinus albus HOM05D005190 ORTHO05D006183 3.8e-54 214.9 136 77.9
Phvul.004G071300 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 3.8e-54 214.9 134 78.4
Ciclev10006189m.g Citrus clementina HOM05D005190 ORTHO05D006183 5.0e-54 214.5 130 80.0
TPR.G12566 Trifolium pratense HOM05D005190 ORTHO05D006183 5.0e-54 214.5 136 79.4
HPP92_019515 Vanilla planifolia HOM05D005190 ORTHO05D006183 5.0e-54 214.5 136 77.9
Sc06g0001490 Simmondsia chinensis HOM05D005190 ORTHO05D006183 8.5e-54 213.8 138 75.4
SGA_v2.0_scaffold198G41066 Striga asiatica HOM05D005190 ORTHO05D006183 1.5e-53 213.0 133 76.7
TPR.G22255 Trifolium pratense HOM05D005190 ORTHO05D006183 2.5e-53 212.2 135 78.5
Medtr7g096570 Medicago truncatula HOM05D005190 ORTHO05D006183 3.2e-53 211.8 137 77.4
arahy.Tifrunner.gnm1.ann1.JER3JH Arachis hypogaea HOM05D005190 ORTHO05D006183 5.5e-53 211.1 140 75.7
Manes.17G016100 Manihot esculenta HOM05D005190 ORTHO05D006183 5.5e-53 211.1 134 76.1
Cpa.g.sc146.40 Carica papaya HOM05D005190 ORTHO05D006183 9.4e-53 210.3 133 79.7
Migut.N00575 Erythranthe guttata HOM05D005190 ORTHO05D006183 9.4e-53 210.3 140 75.0
Nitab4.5_0002793g0070 Nicotiana tabacum HOM05D005190 ORTHO05D006183 9.4e-53 210.3 133 78.2
THA.LOC104800562 Tarenaya hassleriana HOM05D005190 ORTHO05D006183 9.4e-53 210.3 131 80.2
ECA246G1588 Erigeron canadensis HOM05D005190 ORTHO05D006183 1.6e-52 209.5 138 70.3
Solyc08g082740.4 Solanum lycopersicum HOM05D005190 ORTHO05D006183 2.1e-52 209.1 134 76.1
Sopen08g030970 Solanum pennellii HOM05D005190 ORTHO05D006183 2.1e-52 209.1 134 76.1
ATR0730G183 Amborella trichopoda HOM05D005190 ORTHO05D006183 2.7e-52 208.8 131 78.6
arahy.Tifrunner.gnm1.ann1.CG6LTA Arachis hypogaea HOM05D005190 ORTHO05D006183 2.7e-52 208.8 140 75.7
MD13G1144000 Malus domestica HOM05D005190 ORTHO05D006183 4.7e-52 208.0 134 76.1
Nitab4.5_0002367g0140 Nicotiana tabacum HOM05D005190 ORTHO05D006183 4.7e-52 208.0 133 77.4
SalBow4G3050 Salvia bowleyana HOM05D005190 ORTHO05D006183 8.0e-52 207.2 133 73.7
Lsat_1_v5_gn_3_12780 Lactuca sativa HOM05D005190 ORTHO05D006183 1.0e-51 206.8 138 73.2
arahy.Tifrunner.gnm1.ann1.R3ADAS Arachis hypogaea HOM05D005190 ORTHO05D006183 3.0e-51 205.3 133 77.4
arahy.Tifrunner.gnm1.ann1.W6NXGM Arachis hypogaea HOM05D005190 ORTHO05D006183 5.2e-51 204.5 139 75.5
TWI63G0483 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 5.2e-51 204.5 140 74.3
Psat0ss1196g0480 Pisum sativum HOM05D005190 ORTHO05D006183 6.7e-51 204.1 132 76.5
EL10Ac3g06230 Beta vulgaris HOM05D005190 ORTHO05D006183 2.0e-50 202.6 135 73.3
CAN.G567.34 Capsicum annuum HOM05D005190 ORTHO05D006183 2.6e-50 202.2 133 75.2
BcaC05g27594 Brassica carinata HOM05D005190 ORTHO05D006183 3.3e-50 201.8 148 70.3
A05p21200 Brassica napus HOM05D005190 ORTHO05D006183 3.3e-50 201.8 148 70.3
C05p35790 Brassica napus HOM05D005190 ORTHO05D006183 3.3e-50 201.8 148 70.3
BraA05t21026Z Brassica rapa HOM05D005190 ORTHO05D006183 3.3e-50 201.8 148 70.3
HanXRQChr06g0166421 Helianthus annuus HOM05D005190 ORTHO05D006183 5.7e-50 201.1 140 71.4
Lj4g0016109 Lotus japonicus HOM05D005190 ORTHO05D006183 5.7e-50 201.1 136 73.5
SEGI_18361 Sequoiadendron giganteum HOM05D005190 ORTHO05D006183 7.4e-50 200.7 136 74.3
AUR62023660 Chenopodium quinoa HOM05D005190 ORTHO05D006183 1.3e-49 199.9 134 71.6
Os06g0342100 Oryza sativa ssp. japonica HOM05D005190 ORTHO05D006183 1.7e-49 199.5 138 68.8
AUR62002533 Chenopodium quinoa HOM05D005190 ORTHO05D006183 3.7e-49 198.4 134 71.6
HanXRQChr17g0534691 Helianthus annuus HOM05D005190 ORTHO05D006183 1.4e-48 196.4 140 70.0
TPR.G39662 Trifolium pratense HOM05D005190 ORTHO05D006183 4.1e-48 194.9 119 82.4
Zm00001eb066670 Zea mays HOM05D005190 ORTHO05D006183 3.5e-47 191.8 138 66.7
Zm00001eb081370 Zea mays HOM05D005190 ORTHO05D006183 3.5e-47 191.8 138 66.7
Thhalv10011800m.g Eutrema salsugineum HOM05D005190 ORTHO05D006183 5.9e-47 191.0 116 77.6
BcaB04g17462 Brassica carinata HOM05D005190 ORTHO05D006183 7.7e-47 190.7 117 76.9
Aa31LG10G5580 Aethionema arabicum HOM05D005190 ORTHO05D006183 1.3e-46 189.9 108 80.6
Sp1g35120 Schrenkiella parvula HOM05D005190 ORTHO05D006183 1.3e-46 189.9 109 79.8
BcaC07g37169 Brassica carinata HOM05D005190 ORTHO05D006183 1.7e-46 189.5 116 75.9
C08p05420 Brassica napus HOM05D005190 ORTHO05D006183 1.7e-46 189.5 116 75.9
BolC8t47359H Brassica oleracea HOM05D005190 ORTHO05D006183 1.7e-46 189.5 116 75.9
Carub.0001s3725 Capsella rubella HOM05D005190 ORTHO05D006183 1.7e-46 189.5 116 76.7
A08p05180 Brassica napus HOM05D005190 ORTHO05D006183 5.0e-46 188.0 116 75.0
BraA08t32536Z Brassica rapa HOM05D005190 ORTHO05D006183 5.0e-46 188.0 116 75.0
AT1G48160 Arabidopsis thaliana HOM05D005190 ORTHO05D006183 6.5e-46 187.6 109 78.0
AL8G32340 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 8.5e-46 187.2 117 74.4
AL1G54730 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 7.2e-45 184.1 116 73.3
BolC5t32295H Brassica oleracea HOM05D005190 ORTHO05D006183 2.7e-44 182.2 133 67.7
Lsat_1_v5_gn_6_83381 Lactuca sativa HOM05D005190 ORTHO05D006183 2.7e-44 182.2 117 70.9
PSO782G1806 Papaver somniferum HOM05D005190 ORTHO05D006183 3.6e-44 181.8 114 74.6
CARHR037790 Cardamine hirsuta HOM05D005190 ORTHO05D006183 6.1e-44 181.0 117 73.5
PSO478G2609 Papaver somniferum HOM05D005190 ORTHO05D006183 2.3e-43 179.1 112 74.1
Pp3c3_17800 Physcomitrium patens HOM05D005190 ORTHO05D006183 8.8e-43 177.2 143 64.3
Mapoly0004s0269 Marchantia polymorpha HOM05D005190 ORTHO05D006183 9.8e-42 173.7 133 66.9
MD13G1143900 Malus domestica HOM05D005190 ORTHO05D006183 4.8e-41 171.4 113 76.1
TPR.G16114 Trifolium pratense HOM05D005190 ORTHO05D006183 2.7e-39 165.6 100 75.0
unitig_747.g21355 Utricularia gibba HOM05D001490 ORTHO05D001450 2.5e-37 159.1 134 66.4
AagrBONN_evm.TU.Sc2ySwM_362.2360 Anthoceros agrestis HOM05D005190 ORTHO05D006183 8.0e-36 154.1 132 57.6
Ah.07g203500 Amaranthus hybridus HOM05D005190 ORTHO05D006183 4.0e-35 151.8 91 71.4
BcaC08g43007 Brassica carinata HOM05D005190 ORTHO05D006183 8.3e-33 144.1 86 76.7
arahy.Tifrunner.gnm1.ann1.AFL9DX Arachis hypogaea HOM05D005190 ORTHO05D006183 2.3e-30 136.0 118 66.1
CBR_g39024 Chara braunii HOM05D005190 ORTHO05D006183 1.2e-28 130.2 128 57.0
C06p02560 Brassica napus HOM05D005190 ORTHO05D006183 1.6e-28 129.8 112 58.9
vmacro08000 Vaccinium macrocarpon HOM05D005190 ORTHO05D006183 1.4e-27 126.7 81 82.7
Dinv29526 Davidia involucrata HOM05D005190 ORTHO05D006183 3.0e-27 125.6 74 85.1
SMO352G0034 Selaginella moellendorffii HOM05D005190 ORTHO05D006183 1.5e-26 123.2 118 55.9
BcaC01g01495 Brassica carinata HOM05D005190 ORTHO05D006183 2.0e-26 122.9 135 54.8
MBI07_g26367_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 5.7e-26 121.3 123 50.4
Aqoxy2G01813 Aquilegia oxysepala HOM05D005190 ORTHO05D006183 2.7e-23 112.5 78 75.6
Haze_12814 Corylus avellana HOM05D000165 ORTHO05D001328 2.7e-23 112.5 99 57.6
Eucgr.G02037 Eucalyptus grandis HOM05D005190 ORTHO05D006183 1.5e-21 106.7 70 62.9
ClCG05G006830 Citrullus lanatus HOM05D005190 ORTHO05D006183 7.3e-21 104.4 57 77.2
MCO01G268 Micromonas commoda HOM05D005190 ORTHO05D006183 9.5e-21 104.0 111 48.6
CDE05G0439 Ceratophyllum demersum HOM05D005190 ORTHO05D006183 1.6e-20 103.2 75 68.0
BolC6t35384H Brassica oleracea HOM05D005190 ORTHO05D006183 6.1e-20 101.3 61 73.8
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 6.8e-19 97.8 83 66.3
Cre02.g095070 Chlamydomonas reinhardtii HOM05D005190 ORTHO05D006183 4.4e-18 95.1 151 37.1
Atru.chr4.92 Acer truncatum HOM05D005190 ORTHO05D006183 1.6e-15 86.7 56 76.8
EL10As1g23068 Beta vulgaris HOM05D005190 ORTHO05D006183 6.6e-14 81.3 78 52.6
MELO3C033488.2 Cucumis melo HOM05D005190 ORTHO05D006183 1.5e-13 80.1 78 61.5
Cfa023211 Carpinus fangiana HOM05D005190 ORTHO05D006183 8.1e-12 74.3 124 37.1
PRCOL_00001126 Prasinoderma coloniale HOM05D005190 ORTHO05D006183 8.1e-12 74.3 147 37.4
MD13G1001700 Malus domestica HOM05D005190 ORTHO05D006183 1.1e-11 73.9 81 48.1
RcHm_v2.0_Chr7g0219311 Rosa chinensis HOM05D005190 ORTHO05D006183 3.1e-11 72.4 56 58.9
CSS0036753 Camellia sinensis var. sinensis HOM05D008986 ORTHO05D113366 7.1e-08 61.2 62 64.5


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