Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 3.8e-260 901.0 458 100.0
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 1.5e-216 756.1 417 89.7
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 2.7e-213 745.3 453 83.7
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 2.1e-210 735.7 469 80.6
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 6.7e-204 714.1 448 80.8
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 4.8e-202 708.0 472 78.6
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 4.0e-201 704.9 422 81.3
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 5.3e-201 704.5 458 79.5
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 3.4e-200 701.8 452 78.1
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 9.9e-200 700.3 448 79.9
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 4.9e-199 698.0 421 80.8
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 6.4e-199 697.6 419 80.9
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 2.4e-198 695.7 439 81.5
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 1.2e-197 693.3 457 79.0
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 2.1e-197 692.6 427 79.2
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 3.5e-197 691.8 422 80.6
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 6.0e-197 691.0 419 80.2
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 7.9e-197 690.6 414 82.1
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.0e-196 690.3 455 79.1
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 1.8e-196 689.5 453 77.5
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 1.8e-196 689.5 422 80.1
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 5.1e-196 688.0 455 78.7
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 4.3e-195 684.9 455 78.5
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 5.6e-195 684.5 418 79.2
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 7.4e-195 684.1 413 82.1
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 3.7e-194 681.8 452 77.7
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 6.2e-194 681.0 425 78.1
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 1.4e-193 679.9 423 77.3
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 3.1e-193 678.7 455 78.0
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 1.2e-192 676.8 426 78.9
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 4.5e-192 674.9 409 82.9
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 1.7e-191 672.9 424 77.4
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 1.2e-189 666.8 414 80.4
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 6.7e-188 661.0 446 76.5
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 2.8e-186 655.6 447 76.1
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 1.1e-185 653.7 422 75.4
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 1.2e-184 650.2 450 74.7
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 3.4e-184 648.7 423 77.5
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 3.4e-184 648.7 423 77.5
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 1.0e-183 647.1 418 78.5
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 1.3e-183 646.7 437 75.5
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 2.5e-182 642.5 461 73.1
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 3.2e-182 642.1 420 75.7
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 7.2e-182 641.0 406 78.1
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 1.6e-181 639.8 412 78.2
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 1.6e-181 639.8 427 74.2
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 4.6e-181 638.3 453 71.1
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 1.5e-176 623.2 420 73.8
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 5.5e-174 614.8 413 74.8
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 2.7e-173 612.5 440 70.7
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 2.6e-171 605.9 433 71.1
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 5.7e-171 604.7 420 72.4
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 3.7e-170 602.1 420 71.7
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 3.7e-170 602.1 414 71.7
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 1.5e-168 596.7 422 69.7
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 1.3e-167 593.6 447 69.1
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 8.5e-167 590.9 412 72.1
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 8.5e-167 590.9 426 68.8
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 8.5e-167 590.9 409 71.4
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 9.4e-166 587.4 409 70.9
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 3.9e-164 582.0 425 69.2
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 1.1e-163 580.5 417 70.0
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 7.4e-163 577.8 377 75.9
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 3.5e-160 568.9 423 68.1
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 1.0e-159 567.4 414 66.9
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 2.9e-159 565.8 429 66.9
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 8.5e-159 564.3 425 67.3
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 5.5e-158 561.6 423 65.5
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 5.5e-158 561.6 417 68.3
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 7.2e-158 561.2 414 66.2
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 2.7e-157 559.3 422 64.7
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 4.7e-157 558.5 415 65.8
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 1.0e-156 557.4 459 61.7
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 3.0e-156 555.8 414 66.4
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 4.0e-156 555.4 417 65.7
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 2.0e-155 553.1 417 65.5
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 3.3e-155 552.4 417 65.2
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 1.7e-154 550.1 331 81.6
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 3.7e-154 548.9 433 65.4
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 4.8e-154 548.5 404 66.8
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 1.1e-153 547.4 331 80.7
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 1.3e-151 540.4 403 66.5
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 1.3e-151 540.4 440 63.2
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 6.5e-151 538.1 414 66.2
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 1.1e-150 537.3 414 63.8
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 1.5e-150 537.0 415 63.4
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 2.5e-150 536.2 460 62.0
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 6.1e-149 531.6 428 63.6
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 1.4e-148 530.4 453 60.7
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 1.6e-144 516.9 427 63.7
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 1.9e-142 510.0 347 71.5
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 4.2e-142 508.8 483 55.3
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 5.5e-142 508.4 347 71.2
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 3.6e-141 505.8 331 72.8
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 4.0e-140 502.3 367 66.5
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 6.3e-138 495.0 327 74.9
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 2.8e-133 479.6 293 81.2
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 1.4e-132 477.2 404 56.9
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 1.3e-127 460.7 430 55.3
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 2.3e-127 459.9 301 80.7
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 2.3e-119 433.3 313 68.4
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 3.1e-116 422.9 414 55.8
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 2.6e-115 419.9 372 56.7
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 2.7e-112 409.8 335 67.2
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 5.1e-111 405.6 365 56.2
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 8.4e-106 388.3 284 69.4
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 1.6e-104 384.0 280 68.6
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 2.3e-95 353.6 361 50.1
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 3.9e-95 352.8 300 59.0
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 5.6e-94 349.0 295 57.6
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 1.2e-91 341.3 382 47.9
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 2.0e-91 340.5 326 57.4
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 1.3e-90 337.8 245 66.9
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 4.6e-88 329.3 362 50.8
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 3.9e-87 326.2 184 83.2
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 1.1e-81 308.1 218 72.5
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 9.6e-78 295.0 261 54.8
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 6.0e-72 275.8 160 84.4
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 1.3e-71 274.6 325 48.0
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 1.1e-60 238.4 124 91.9
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 5.3e-60 236.1 131 87.8
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 4.5e-59 233.0 240 49.6
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 7.2e-57 225.7 175 65.7
Haze_10661 Corylus avellana HOM05D006166 ORTHO05D007663 9.4e-49 198.7 191 61.3
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 1.6e-48 198.0 144 70.8
Dinv09041 Davidia involucrata HOM05D006166 ORTHO05D000293 1.5e-38 164.9 140 70.0
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 2.8e-37 160.6 282 34.0
SHI16502 Sapria himalayana HOM05D006166 ORTHO05D007663 3.3e-25 120.6 203 37.9
CDE05G1058 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 1.7e-18 98.2 59 78.0
Haze_10677 Corylus avellana HOM05D006166 ORTHO05D007663 3.3e-17 94.0 77 64.9


User provided reference genes

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