Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005544 Carpinus fangiana HOM05D004799 ORTHO05D005500 4.4e-119 431.4 233 100.0
Haze_01626 Corylus avellana HOM05D004799 ORTHO05D005500 1.0e-112 410.2 235 95.7
CiPaw.06G148900 Carya illinoinensis HOM05D004799 ORTHO05D005500 5.2e-88 328.2 240 78.3
QL02p098623 Quercus lobata HOM05D004799 ORTHO05D005500 3.4e-87 325.5 266 74.1
CiPaw.05G042800 Carya illinoinensis HOM05D004799 ORTHO05D005500 3.3e-82 308.9 278 68.0
GSVIVG01023017001 Vitis vinifera HOM05D004799 ORTHO05D005500 9.5e-82 307.4 236 73.7
Duzib248G0546 Durio zibethinus HOM05D004799 ORTHO05D005500 1.8e-80 303.1 229 73.8
Duzib132G0636 Durio zibethinus HOM05D004799 ORTHO05D005500 8.9e-80 300.8 234 73.1
MD08G1225100 Malus domestica HOM05D004799 ORTHO05D005500 7.6e-79 297.7 236 74.6
MD15G1418700 Malus domestica HOM05D004799 ORTHO05D005500 5.4e-77 291.6 237 74.3
FAN04G2475 Fragaria x ananassa HOM05D004799 ORTHO05D005500 4.6e-76 288.5 227 70.9
FAN13G3307 Fragaria x ananassa HOM05D004799 ORTHO05D005500 6.0e-76 288.1 226 71.7
Gohir.A01G177000 Gossypium hirsutum HOM05D004799 ORTHO05D005500 6.0e-76 288.1 234 71.4
Gorai.002G208500 Gossypium raimondii HOM05D004799 ORTHO05D005500 2.3e-75 286.2 234 70.9
Dinv19352 Davidia involucrata HOM05D004799 ORTHO05D005500 3.0e-75 285.8 232 70.3
FvH4_5g30080 Fragaria vesca HOM05D004799 ORTHO05D005500 3.0e-75 285.8 226 71.2
Gohir.D01G167800 Gossypium hirsutum HOM05D004799 ORTHO05D005500 3.9e-75 285.4 234 70.9
Gohir.A03G210900 Gossypium hirsutum HOM05D004799 ORTHO05D005500 5.1e-75 285.0 233 68.7
Manes.10G132000 Manihot esculenta HOM05D004799 ORTHO05D005500 3.3e-74 282.3 226 71.7
Sabra01G0161300 Salix brachista HOM05D004799 ORTHO05D005500 1.2e-73 280.4 255 65.5
Cpa.g.sc2.26 Carica papaya HOM05D004799 ORTHO05D005500 1.6e-73 280.0 236 68.6
Ciclev10002345m.g Citrus clementina HOM05D004799 ORTHO05D005500 6.2e-73 278.1 238 69.7
FAN18G4597 Fragaria x ananassa HOM05D004799 ORTHO05D005500 6.2e-73 278.1 235 68.5
RcHm_v2.0_Chr7g0224271 Rosa chinensis HOM05D004799 ORTHO05D005500 1.8e-72 276.6 229 69.9
Potri.001G209100 Populus trichocarpa HOM05D004799 ORTHO05D005500 5.2e-72 275.0 226 69.5
PGSC0003DMG400023776 Solanum tuberosum HOM05D004799 ORTHO05D005500 1.3e-70 270.4 235 68.9
Eucgr.I02711 Eucalyptus grandis HOM05D004799 ORTHO05D005500 2.2e-70 269.6 227 68.3
Sopen01g046960 Solanum pennellii HOM05D004799 ORTHO05D005500 2.9e-70 269.2 235 68.5
Hma1.2p1_0217F.1_g091930 Hydrangea macrophylla HOM05D004799 ORTHO05D005500 3.8e-70 268.9 234 68.4
Lalb_Chr07g0185691 Lupinus albus HOM05D004799 ORTHO05D005500 8.4e-70 267.7 228 65.8
Manes.07G013800 Manihot esculenta HOM05D004799 ORTHO05D005500 8.4e-70 267.7 237 69.2
Sabra03G0013400 Salix brachista HOM05D004799 ORTHO05D005500 4.2e-69 265.4 223 66.8
Lj5A248T74 Lonicera japonica HOM05D004799 ORTHO05D005500 5.4e-69 265.0 236 68.2
Cc02_g22290 Coffea canephora HOM05D004799 ORTHO05D005500 7.8e-68 261.2 240 65.8
Thecc.02G041200 Theobroma cacao HOM05D004799 ORTHO05D005500 1.0e-67 260.8 234 65.8
Gohir.D02G232500 Gossypium hirsutum HOM05D004799 ORTHO05D005500 1.7e-67 260.0 233 65.7
Gorai.005G260300 Gossypium raimondii HOM05D004799 ORTHO05D005500 3.9e-67 258.8 233 65.2
Lalb_Chr12g0204381 Lupinus albus HOM05D004799 ORTHO05D005500 3.9e-67 258.8 229 64.6
TAR628G0692 Trochodendron aralioides HOM05D004799 ORTHO05D005500 5.1e-67 258.5 236 64.4
TWI59G1038 Tripterygium wilfordii HOM05D004799 ORTHO05D005500 3.3e-66 255.8 220 67.3
Dinv24262 Davidia involucrata HOM05D004799 ORTHO05D005500 4.3e-66 255.4 225 65.8
Peaxi162Scf00011g00139 Petunia axillaris HOM05D004799 ORTHO05D005500 5.6e-66 255.0 228 67.5
vmacro01776 Vaccinium macrocarpon HOM05D004799 ORTHO05D005500 1.6e-65 253.4 263 58.6
Potri.003G021500 Populus trichocarpa HOM05D004799 ORTHO05D005500 4.8e-65 251.9 219 66.2
Migut.B00668 Erythranthe guttata HOM05D004799 ORTHO05D005500 6.2e-65 251.5 230 61.7
TAR376G0767 Trochodendron aralioides HOM05D004799 ORTHO05D005500 8.1e-65 251.1 235 64.7
MSTRG.27841 Avicennia marina HOM05D004799 ORTHO05D005500 1.4e-64 250.4 231 63.6
arahy.Tifrunner.gnm1.ann1.ZS42GJ Arachis hypogaea HOM05D004799 ORTHO05D005500 1.8e-64 250.0 218 66.1
CANSAT11G1940 Cannabis sativa HOM05D004799 ORTHO05D005500 2.4e-64 249.6 239 61.5
arahy.Tifrunner.gnm1.ann1.BG3XJE Arachis hypogaea HOM05D004799 ORTHO05D005500 3.1e-64 249.2 218 66.1
THA.LOC104809537 Tarenaya hassleriana HOM05D004799 ORTHO05D005500 3.1e-64 249.2 235 63.4
FAN08G0327 Fragaria x ananassa HOM05D004799 ORTHO05D005500 1.7e-62 243.4 226 63.3
Atru.chr6.1081 Acer truncatum HOM05D004799 ORTHO05D005500 3.8e-62 242.3 202 69.8
Lj6g0003329 Lotus japonicus HOM05D004799 ORTHO05D005500 1.4e-61 240.4 208 64.9
CAN.G1352.25 Capsicum annuum HOM05D004799 ORTHO05D005500 1.2e-60 237.3 234 61.5
Medtr2g007770 Medicago truncatula HOM05D004799 ORTHO05D005500 1.2e-60 237.3 212 62.7
Oeu012743.2 Olea europaea HOM05D004799 ORTHO05D005500 1.2e-60 237.3 251 58.2
CsaV3_7G007080 Cucumis sativus L. HOM05D004799 ORTHO05D005500 1.6e-60 236.9 235 60.9
MELO3C018586.2 Cucumis melo HOM05D004799 ORTHO05D005500 4.6e-60 235.3 236 61.4
Oeu008877.2 Olea europaea HOM05D004799 ORTHO05D005500 4.6e-60 235.3 265 57.4
Carub.0001s1103 Capsella rubella HOM05D004799 ORTHO05D005500 6.0e-60 235.0 235 63.4
Sc14g0006850 Simmondsia chinensis HOM05D004799 ORTHO05D005500 1.8e-59 233.4 230 61.3
ClCG09G016220 Citrullus lanatus HOM05D004799 ORTHO05D005500 3.0e-59 232.6 233 61.8
Nitab4.5_0010140g0010 Nicotiana tabacum HOM05D004799 ORTHO05D005500 3.9e-59 232.3 224 63.8
TPR.G2141 Trifolium pratense HOM05D004799 ORTHO05D005500 3.9e-59 232.3 219 59.8
Lsat_1_v5_gn_9_116381 Lactuca sativa HOM05D004799 ORTHO05D005500 5.6e-58 228.4 234 61.1
Hund19012 Selenicereus undatus HOM05D004799 ORTHO05D005500 5.6e-58 228.4 239 59.8
TWI23G0644 Tripterygium wilfordii HOM05D004799 ORTHO05D005500 9.6e-58 227.6 236 58.1
AUR62018552 Chenopodium quinoa HOM05D004799 ORTHO05D005500 1.3e-57 227.3 233 58.4
Psat1g220000 Pisum sativum HOM05D004799 ORTHO05D005500 2.1e-57 226.5 219 60.7
AUR62020867 Chenopodium quinoa HOM05D004799 ORTHO05D005500 2.8e-57 226.1 233 57.9
DCAR_005625 Daucus carota HOM05D004799 ORTHO05D005500 3.7e-57 225.7 218 60.6
CsaV3_5G024750 Cucumis sativus L. HOM05D004799 ORTHO05D005500 6.2e-57 224.9 235 59.1
CSS0024882 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 1.4e-56 223.8 187 68.4
CSS0037217 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 1.4e-56 223.8 187 68.4
Rhsim11G0131600 Rhododendron simsii HOM05D004799 ORTHO05D005500 1.4e-56 223.8 340 45.6
Aa31LG1G3310 Aethionema arabicum HOM05D004799 ORTHO05D005500 6.9e-56 221.5 235 59.1
Actinidia00218 Actinidia chinensis HOM05D004799 ORTHO05D005500 9.0e-56 221.1 218 61.5
SGA_v2.0_scaffold110G31288 Striga asiatica HOM05D004799 ORTHO05D005500 1.2e-55 220.7 238 55.5
Glyma.08G128300 Glycine max HOM05D004799 ORTHO05D005500 3.4e-55 219.2 223 61.4
HanXRQChr03g0066881 Helianthus annuus HOM05D004799 ORTHO05D005500 4.5e-55 218.8 232 56.5
Sp1g10030 Schrenkiella parvula HOM05D004799 ORTHO05D005500 9.9e-55 217.6 229 58.5
VMungo0251G3647 Vigna mungo HOM05D004799 ORTHO05D005500 2.9e-54 216.1 223 60.5
BraA08t35264Z Brassica rapa HOM05D004799 ORTHO05D005500 6.4e-54 214.9 229 58.1
Ah.04g149450 Amaranthus hybridus HOM05D004799 ORTHO05D005500 8.4e-54 214.5 239 58.6
EL10Ac3g07450 Beta vulgaris HOM05D004799 ORTHO05D005500 8.4e-54 214.5 225 58.7
A08p33480 Brassica napus HOM05D004799 ORTHO05D005500 8.4e-54 214.5 229 58.1
COL.COLO4_17895 Corchorus olitorius HOM05D004799 ORTHO05D005500 1.9e-53 213.4 231 58.0
C08p14470 Brassica napus HOM05D004799 ORTHO05D005500 1.6e-52 210.3 229 57.2
ATR0684G092 Amborella trichopoda HOM05D004799 ORTHO05D005500 2.1e-52 209.9 222 57.2
Actinidia39055 Actinidia chinensis HOM05D004799 ORTHO05D005500 2.7e-52 209.5 192 64.6
BcaC07g38663 Brassica carinata HOM05D004799 ORTHO05D005500 3.5e-52 209.1 229 57.2
BolC8t49096H Brassica oleracea HOM05D004799 ORTHO05D005500 3.5e-52 209.1 229 57.2
Nitab4.5_0005539g0010 Nicotiana tabacum HOM05D004799 ORTHO05D005500 3.5e-52 209.1 224 58.9
BcaB03g13259 Brassica carinata HOM05D004799 ORTHO05D005500 6.0e-52 208.4 230 57.0
Aqoxy6G00151 Aquilegia oxysepala HOM05D004799 ORTHO05D005500 1.0e-51 207.6 228 58.3
AL1G22490 Arabidopsis lyrata HOM05D004799 ORTHO05D005500 1.0e-51 207.6 227 57.7
Sed0004816 Sechium edule HOM05D004799 ORTHO05D005500 1.0e-51 207.6 236 55.9
CARHR011640 Cardamine hirsuta HOM05D004799 ORTHO05D005500 1.3e-51 207.2 233 56.2
unitig_26.g9556 Utricularia gibba HOM05D004799 ORTHO05D005500 6.7e-51 204.9 216 56.9
Ca_00089_v3 Cicer arietinum L. HOM05D004799 ORTHO05D005500 3.3e-50 202.6 267 50.2
Ca_29928_v3 Cicer arietinum L. HOM05D004799 ORTHO05D005500 3.3e-50 202.6 267 50.2
Glyma.05G170200 Glycine max HOM05D004799 ORTHO05D005500 5.6e-50 201.8 227 57.3
BcaC05g25015 Brassica carinata HOM05D004799 ORTHO05D005500 4.0e-48 195.7 231 55.4
C05p09620 Brassica napus HOM05D004799 ORTHO05D005500 4.0e-48 195.7 231 55.4
BolC5t29704H Brassica oleracea HOM05D004799 ORTHO05D005500 4.0e-48 195.7 231 55.4
AT1G11400 Arabidopsis thaliana HOM05D004799 ORTHO05D005500 9.0e-48 194.5 222 55.4
A06p08020 Brassica napus HOM05D004799 ORTHO05D005500 1.5e-47 193.7 231 54.1
BraA06t24001Z Brassica rapa HOM05D004799 ORTHO05D005500 1.5e-47 193.7 231 54.1
Lsat_1_v5_gn_7_77960 Lactuca sativa HOM05D004799 ORTHO05D005500 3.4e-47 192.6 231 56.7
Prupe.1G562800 Prunus persica HOM05D004799 ORTHO05D005500 1.3e-46 190.7 166 70.5
Phvul.002G251000 Phaseolus vulgaris HOM05D004799 ORTHO05D005500 6.5e-46 188.3 220 54.5
PSO528G0257 Papaver somniferum HOM05D004799 ORTHO05D005500 7.1e-45 184.9 233 52.4
Thhalv10008698m.g Eutrema salsugineum HOM05D004799 ORTHO05D005500 3.5e-44 182.6 229 52.4
Nn5g28066 Nelumbo nucifera HOM05D004799 ORTHO05D005500 1.0e-43 181.0 188 59.6
HPP92_019221 Vanilla planifolia HOM05D004799 ORTHO05D005500 1.0e-43 181.0 215 54.9
Os03g0262100 Oryza sativa ssp. japonica HOM05D004799 ORTHO05D005500 3.0e-43 179.5 229 50.7
SalBow6G1776 Salvia bowleyana HOM05D004799 ORTHO05D005500 1.3e-41 174.1 230 52.2
SalBow6G5744 Salvia bowleyana HOM05D004799 ORTHO05D005500 1.3e-41 174.1 230 52.2
Zm00001eb011470 Zea mays HOM05D004799 ORTHO05D005500 8.2e-41 171.4 236 49.6
Nn1g08619 Nelumbo nucifera HOM05D004799 ORTHO05D005500 1.5e-39 167.2 168 58.9
CDE02G4357 Ceratophyllum demersum HOM05D004799 ORTHO05D005500 3.4e-39 166.0 227 48.5
MBI03_g11149_MAGBIO Magnolia biondii HOM05D004799 ORTHO05D005500 4.2e-37 159.1 313 41.5
ECA240G2283 Erigeron canadensis HOM05D004799 ORTHO05D005500 7.2e-37 158.3 217 46.5
PSO170G0171 Papaver somniferum HOM05D004799 ORTHO05D005500 1.3e-35 154.1 233 46.8
MSTRG.16532 Avicennia marina HOM05D004799 ORTHO05D005500 6.3e-33 145.2 158 56.3
Atru.chr6.1045 Acer truncatum HOM05D004799 ORTHO05D005500 9.1e-32 141.4 132 62.9
HPP92_009361 Vanilla planifolia HOM05D004799 ORTHO05D005500 1.9e-29 133.7 214 46.7
Glyma.14G170300 Glycine max HOM05D004799 ORTHO05D005500 3.6e-28 129.4 152 57.2
SEGI_10500 Sequoiadendron giganteum HOM05D004799 ORTHO05D005500 3.0e-27 126.3 94 72.3
Lj9C308T7 Lonicera japonica HOM05D004799 ORTHO05D005500 9.7e-26 121.3 146 54.1
Mapoly0065s0027 Marchantia polymorpha HOM05D004799 ORTHO05D005500 4.8e-25 119.0 209 41.6
Ah.13g077920 Amaranthus hybridus HOM05D004799 ORTHO05D005500 8.0e-20 101.7 225 39.1
CBR_g22015 Chara braunii HOM05D004799 ORTHO05D005500 1.4e-19 100.9 262 35.9
MBI03_g11127_MAGBIO Magnolia biondii HOM05D004799 ORTHO05D005500 1.4e-19 100.9 110 59.1
Zm00001eb398170 Zea mays HOM05D004799 ORTHO05D005500 1.5e-18 97.4 164 43.3
GSVIVG01013911001 Vitis vinifera HOM05D004799 ORTHO05D005500 5.7e-18 95.5 90 60.0
AagrBONN_evm.TU.Sc2ySwM_344.2060 Anthoceros agrestis HOM05D004799 ORTHO05D005500 3.5e-15 86.3 95 54.7
arahy.Tifrunner.gnm1.ann1.DUW5WJ Arachis hypogaea HOM05D004799 ORTHO05D005500 7.7e-15 85.1 81 65.4
Lj5A253T37 Lonicera japonica HOM05D012292 ORTHO05D012234 8.8e-11 71.6 237 33.8
CSS0012117 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 5.7e-10 68.9 45 73.3
A09p63310 Brassica napus HOM05D004799 ORTHO05D005500 1.3e-09 67.8 56 62.5
BraA09t41682Z Brassica rapa HOM05D004799 ORTHO05D005500 1.3e-09 67.8 56 62.5
CSS0018254 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 1.3e-09 67.8 45 73.3
SMO367G0479 Selaginella moellendorffii HOM05D004799 ORTHO05D005500 2.2e-09 67.0 39 82.1
SEGI_00858 Sequoiadendron giganteum HOM05D004799 ORTHO05D005500 8.2e-09 65.1 122 40.2
BcaB03g13258 Brassica carinata HOM05D004799 ORTHO05D005500 2.4e-08 63.5 91 46.2
Lj5A252G43 Lonicera japonica HOM05D012292 ORTHO05D012234 1.6e-07 60.8 95 43.2
Pp3c4_27250 Physcomitrium patens HOM05D004799 ORTHO05D005500 7.7e-07 58.5 147 34.7


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