Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005497 Carpinus fangiana HOM05D005257 ORTHO05D006425 7.6e-56 220.3 116 100.0
Haze_20460 Corylus avellana HOM05D005257 ORTHO05D006425 2.3e-52 208.8 116 93.1
QL07p027173 Quercus lobata HOM05D005257 ORTHO05D006425 3.6e-45 184.9 115 80.9
CiPaw.09G164800 Carya illinoinensis HOM05D005257 ORTHO05D006425 1.8e-44 182.6 116 79.3
Lj1g0008743 Lotus japonicus HOM05D005257 ORTHO05D006425 4.3e-43 177.9 116 74.1
Glyma.19G114400 Glycine max HOM05D005257 ORTHO05D006425 2.8e-42 175.3 116 73.3
Lj1g0012853 Lotus japonicus HOM05D005257 ORTHO05D006425 2.8e-42 175.3 116 72.4
Lalb_Chr10g0095341 Lupinus albus HOM05D005257 ORTHO05D006425 8.2e-42 173.7 116 69.8
Atru.chr2.1463 Acer truncatum HOM05D005257 ORTHO05D006425 1.1e-41 173.3 116 70.7
Potri.013G061400 Populus trichocarpa HOM05D005257 ORTHO05D006425 1.1e-41 173.3 116 74.1
Glyma.16G038400 Glycine max HOM05D005257 ORTHO05D006425 1.4e-41 172.9 116 72.4
Phvul.001G113700 Phaseolus vulgaris HOM05D005257 ORTHO05D006425 1.4e-41 172.9 114 72.8
Gohir.D11G243400 Gossypium hirsutum HOM05D005257 ORTHO05D006425 1.8e-41 172.6 116 70.7
Gorai.007G258400 Gossypium raimondii HOM05D005257 ORTHO05D006425 2.4e-41 172.2 116 70.7
Prupe.1G541500 Prunus persica HOM05D005257 ORTHO05D006425 3.1e-41 171.8 116 75.0
Sabra13G0054300 Salix brachista HOM05D005257 ORTHO05D006425 4.1e-41 171.4 116 72.4
Gohir.A11G232100 Gossypium hirsutum HOM05D005257 ORTHO05D006425 9.1e-41 170.2 116 69.8
Thecc.05G245000 Theobroma cacao HOM05D005257 ORTHO05D006425 9.1e-41 170.2 116 70.7
TPR.G17857 Trifolium pratense HOM05D005257 ORTHO05D006425 3.4e-40 168.3 115 69.6
TWI31G1180 Tripterygium wilfordii HOM05D005257 ORTHO05D006425 3.4e-40 168.3 116 70.7
arahy.Tifrunner.gnm1.ann1.JQ1SRI Arachis hypogaea HOM05D005257 ORTHO05D006425 4.5e-40 167.9 116 67.2
RcHm_v2.0_Chr6g0270841 Rosa chinensis HOM05D005257 ORTHO05D006425 4.5e-40 167.9 116 73.3
VMungo1383G2809 Vigna mungo HOM05D005257 ORTHO05D006425 4.5e-40 167.9 114 68.4
arahy.Tifrunner.gnm1.ann1.B386PI Arachis hypogaea HOM05D005257 ORTHO05D006425 7.7e-40 167.2 116 66.4
MELO3C008815.2 Cucumis melo HOM05D005257 ORTHO05D006425 7.7e-40 167.2 116 70.7
Manes.08G154800 Manihot esculenta HOM05D005257 ORTHO05D006425 1.0e-39 166.8 116 72.4
Sed0016053 Sechium edule HOM05D005257 ORTHO05D006425 1.0e-39 166.8 116 71.6
Sc10g0005500 Simmondsia chinensis HOM05D005257 ORTHO05D006425 1.0e-39 166.8 116 69.8
Duzib177G0708 Durio zibethinus HOM05D005257 ORTHO05D006425 1.3e-39 166.4 116 69.8
Medtr7g086290 Medicago truncatula HOM05D005257 ORTHO05D006425 1.3e-39 166.4 115 69.6
ClCG04G005430 Citrullus lanatus HOM05D005257 ORTHO05D006425 2.9e-39 165.2 116 69.8
CANSAT35G0669 Cannabis sativa HOM05D005257 ORTHO05D006425 3.8e-39 164.9 116 68.1
Ciclev10018934m.g Citrus clementina HOM05D005257 ORTHO05D006425 5.0e-39 164.5 116 69.0
CsaV3_4G012150 Cucumis sativus L. HOM05D005257 ORTHO05D006425 6.5e-39 164.1 116 69.8
FAN15G1561 Fragaria x ananassa HOM05D005257 ORTHO05D006425 6.5e-39 164.1 116 72.4
FAN24G1403 Fragaria x ananassa HOM05D005257 ORTHO05D006425 6.5e-39 164.1 116 72.4
Ca_08293_v3 Cicer arietinum L. HOM05D005257 ORTHO05D006425 1.9e-38 162.5 115 67.0
Ca_29914_v3 Cicer arietinum L. HOM05D005257 ORTHO05D006425 1.9e-38 162.5 115 67.0
Eucgr.A02125 Eucalyptus grandis HOM05D005257 ORTHO05D006425 1.9e-38 162.5 116 68.1
FAN27G2011 Fragaria x ananassa HOM05D005257 ORTHO05D006425 1.9e-38 162.5 116 71.6
FvH4_2g11600 Fragaria vesca HOM05D005257 ORTHO05D006425 2.5e-38 162.2 115 71.3
GSVIVG01029949001 Vitis vinifera HOM05D005257 ORTHO05D006425 2.5e-38 162.2 116 66.4
PGR042G3559 Punica granatum HOM05D005257 ORTHO05D006425 9.4e-38 160.2 116 67.2
Hma1.2p1_0768F.1_g215610 Hydrangea macrophylla HOM05D005257 ORTHO05D006425 2.7e-37 158.7 116 64.7
MD12G1008000 Malus domestica HOM05D005257 ORTHO05D006425 2.7e-37 158.7 116 70.7
Hma1.2p1_0768F.1_g215600 Hydrangea macrophylla HOM05D005257 ORTHO05D006425 3.6e-37 158.3 115 64.3
PGR042G1596 Punica granatum HOM05D005257 ORTHO05D006425 3.6e-37 158.3 116 65.5
Psat3g087120 Pisum sativum HOM05D005257 ORTHO05D006425 4.7e-37 157.9 115 65.2
Hund03701 Selenicereus undatus HOM05D005257 ORTHO05D006425 1.4e-36 156.4 116 66.4
Solyc03g097280.4 Solanum lycopersicum HOM05D005257 ORTHO05D006425 1.4e-36 156.4 116 64.7
CARHR195170 Cardamine hirsuta HOM05D005257 ORTHO05D006425 1.8e-36 156.0 116 68.1
Sopen03g028060 Solanum pennellii HOM05D001816 ORTHO05D002001 1.8e-36 156.0 115 64.3
AL6G29030 Arabidopsis lyrata HOM05D005257 ORTHO05D006425 2.3e-36 155.6 116 66.4
AUR62039715 Chenopodium quinoa HOM05D005257 ORTHO05D006425 2.3e-36 155.6 116 67.2
Hund15057 Selenicereus undatus HOM05D005257 ORTHO05D006425 2.3e-36 155.6 116 67.2
AT5G17930 Arabidopsis thaliana HOM05D005257 ORTHO05D006425 3.0e-36 155.2 116 67.2
Cpa.g.sc56.49 Carica papaya HOM05D005257 ORTHO05D006425 3.9e-36 154.8 114 67.5
EL10Ac5g11757 Beta vulgaris HOM05D005257 ORTHO05D006425 5.1e-36 154.5 116 65.5
Carub.0006s1614 Capsella rubella HOM05D005257 ORTHO05D006425 5.1e-36 154.5 116 66.4
CAN.G732.36 Capsicum annuum HOM05D005257 ORTHO05D006425 6.7e-36 154.1 116 64.7
Sopen03g028050 Solanum pennellii HOM05D005257 ORTHO05D006425 1.5e-35 152.9 116 63.8
Thhalv10012737m.g Eutrema salsugineum HOM05D005257 ORTHO05D006425 2.6e-35 152.1 116 65.5
Peaxi162Scf00117g00415 Petunia axillaris HOM05D005257 ORTHO05D006425 2.6e-35 152.1 116 63.8
Actinidia21524 Actinidia chinensis HOM05D005257 ORTHO05D006425 3.3e-35 151.8 115 64.3
arahy.Tifrunner.gnm1.ann1.YCKM6W Arachis hypogaea HOM05D005257 ORTHO05D006425 5.7e-35 151.0 107 65.4
MSTRG.19351 Avicennia marina HOM05D005257 ORTHO05D006425 5.7e-35 151.0 116 62.1
AUR62036264 Chenopodium quinoa HOM05D005257 ORTHO05D006425 5.7e-35 151.0 116 65.5
Sp6g26340 Schrenkiella parvula HOM05D005257 ORTHO05D006425 5.7e-35 151.0 114 66.7
TAR362G1082 Trochodendron aralioides HOM05D005257 ORTHO05D006425 5.7e-35 151.0 116 62.9
Oeu044649.1 Olea europaea HOM05D005257 ORTHO05D006425 1.3e-34 149.8 115 63.5
Lj4C106T9 Lonicera japonica HOM05D005257 ORTHO05D006425 2.2e-34 149.1 116 62.1
SGA_v2.0_scaffold31G12800 Striga asiatica HOM05D005257 ORTHO05D006425 2.2e-34 149.1 112 63.4
Aa31LG11G11610 Aethionema arabicum HOM05D005257 ORTHO05D006425 2.8e-34 148.7 116 64.7
A02p04570 Brassica napus HOM05D005257 ORTHO05D006425 2.8e-34 148.7 115 64.3
C02p09500 Brassica napus HOM05D005257 ORTHO05D006425 2.8e-34 148.7 115 64.3
BolC2t06856H Brassica oleracea HOM05D005257 ORTHO05D006425 2.8e-34 148.7 115 64.3
BraA02t05418Z Brassica rapa HOM05D005257 ORTHO05D006425 2.8e-34 148.7 115 64.3
CSS0043158 Camellia sinensis var. sinensis HOM05D005257 ORTHO05D006425 2.8e-34 148.7 116 61.2
Nitab4.5_0000098g0070 Nicotiana tabacum HOM05D005257 ORTHO05D006425 4.8e-34 147.9 114 62.3
BcaB05g23293 Brassica carinata HOM05D005257 ORTHO05D006425 8.2e-34 147.1 115 62.6
Aqoxy1G00543 Aquilegia oxysepala HOM05D005257 ORTHO05D006425 1.1e-33 146.7 114 59.6
Migut.J00763 Erythranthe guttata HOM05D005257 ORTHO05D006425 1.4e-33 146.4 116 60.3
arahy.Tifrunner.gnm1.ann1.DQ02GG Arachis hypogaea HOM05D005257 ORTHO05D006425 3.1e-33 145.2 102 65.7
SalBow3G0128 Salvia bowleyana HOM05D005257 ORTHO05D006425 3.1e-33 145.2 116 62.1
PSO339G0351 Papaver somniferum HOM05D005257 ORTHO05D006425 4.1e-33 144.8 116 61.2
DCAR_003248 Daucus carota HOM05D005257 ORTHO05D006425 5.3e-33 144.4 116 56.9
THA.LOC104802876 Tarenaya hassleriana HOM05D005257 ORTHO05D006425 1.5e-32 142.9 118 62.7
MBI05_g13905_MAGBIO Magnolia biondii HOM05D005257 ORTHO05D006425 2.0e-32 142.5 116 62.9
HPP92_025446 Vanilla planifolia HOM05D005257 ORTHO05D006425 2.0e-32 142.5 118 64.4
PSO384G0627 Papaver somniferum HOM05D005257 ORTHO05D006425 2.6e-32 142.1 116 60.3
Cc06_g07290 Coffea canephora HOM05D005257 ORTHO05D006425 3.5e-32 141.7 116 60.3
Nn1g06286 Nelumbo nucifera HOM05D005257 ORTHO05D006425 5.9e-32 141.0 116 62.1
GSVIVG01027853001 Vitis vinifera HOM05D005257 ORTHO05D006425 1.0e-31 140.2 109 60.6
ATR0697G033 Amborella trichopoda HOM05D005257 ORTHO05D006425 2.9e-31 138.7 120 60.0
CDE10G0660 Ceratophyllum demersum HOM05D005257 ORTHO05D006425 1.9e-30 136.0 115 64.3
Rhsim08G0079300 Rhododendron simsii HOM05D005257 ORTHO05D006425 2.7e-29 132.1 115 55.7
Lsat_1_v5_gn_9_60281 Lactuca sativa HOM05D005257 ORTHO05D006425 8.0e-29 130.6 112 61.6
vmacro18109 Vaccinium macrocarpon HOM05D005257 ORTHO05D006425 6.7e-28 127.5 115 54.8
Nitab4.5_0010527g0010 Nicotiana tabacum HOM05D005257 ORTHO05D006425 1.1e-25 120.2 90 64.4
HanXRQChr02g0058981 Helianthus annuus HOM05D005257 ORTHO05D006425 5.3e-25 117.9 113 55.8
HanXRQChr12g0354211 Helianthus annuus HOM05D005257 ORTHO05D006425 5.3e-25 117.9 113 55.8
Os05g0147200 Oryza sativa ssp. japonica HOM05D005257 ORTHO05D006425 5.0e-23 111.3 118 51.7
SEGI_02385 Sequoiadendron giganteum HOM05D005257 ORTHO05D006425 5.0e-23 111.3 129 48.8
Zm00001eb417990 Zea mays HOM05D005257 ORTHO05D006425 5.0e-23 111.3 118 52.5
ECA232G0672 Erigeron canadensis HOM05D005257 ORTHO05D006425 1.6e-21 106.3 89 59.6
AagrBONN_evm.TU.Sc2ySwM_340.475 Anthoceros agrestis HOM05D005257 ORTHO05D006425 1.7e-18 96.3 121 43.0
Mapoly0135s0015 Marchantia polymorpha HOM05D005257 ORTHO05D006425 1.4e-17 93.2 124 41.1
Ah.15g100130 Amaranthus hybridus HOM05D005257 ORTHO05D006425 4.1e-17 91.7 67 61.2
CBR_g51831 Chara braunii HOM05D005257 ORTHO05D006425 2.7e-16 89.0 129 38.0
Pp3c3_21680 Physcomitrium patens HOM05D005257 ORTHO05D006425 1.2e-13 80.1 120 37.5
SMO172G0149 Selaginella moellendorffii HOM05D005257 ORTHO05D006425 6.8e-12 74.3 115 38.3


User provided reference genes

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