Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005272 Carpinus fangiana HOM05D004625 ORTHO05D006054 3.2e-90 335.1 176 100.0
CiPaw.05G058800 Carya illinoinensis HOM05D004625 ORTHO05D006054 1.6e-33 146.7 92 83.7
Haze_02461 Corylus avellana HOM05D004625 ORTHO05D006054 3.6e-33 145.6 92 82.6
Haze_02463 Corylus avellana HOM05D004625 ORTHO05D006054 3.6e-33 145.6 92 82.6
Cfa004948 Carpinus fangiana HOM05D004625 ORTHO05D006054 1.4e-32 143.7 92 81.5
QL11p039255 Quercus lobata HOM05D004625 ORTHO05D006054 3.2e-29 132.5 92 77.2
Gohir.A01G181800 Gossypium hirsutum HOM05D004625 ORTHO05D006054 2.1e-28 129.8 92 72.8
Gohir.D01G172900 Gossypium hirsutum HOM05D004625 ORTHO05D006054 2.1e-28 129.8 92 72.8
Gorai.002G214500 Gossypium raimondii HOM05D004625 ORTHO05D006054 2.1e-28 129.8 92 72.8
FvH4_2g07370 Fragaria vesca HOM05D004625 ORTHO05D006054 3.5e-28 129.0 92 72.8
Duzib052G1066 Durio zibethinus HOM05D004625 ORTHO05D006054 6.0e-28 128.3 92 72.8
Thecc.02G028700 Theobroma cacao HOM05D004625 ORTHO05D006054 6.0e-28 128.3 92 72.8
Prupe.8G112500 Prunus persica HOM05D004625 ORTHO05D006054 7.8e-28 127.9 90 73.3
Ciclev10027657m.g Citrus clementina HOM05D004625 ORTHO05D006054 1.0e-27 127.5 92 71.7
FAN27G0869 Fragaria x ananassa HOM05D004625 ORTHO05D006054 1.3e-27 127.1 92 71.7
FAN15G2126 Fragaria x ananassa HOM05D004625 ORTHO05D006054 2.3e-27 126.3 92 71.7
FAN24G2498 Fragaria x ananassa HOM05D004625 ORTHO05D006054 2.3e-27 126.3 92 71.7
MD10G1086500 Malus domestica HOM05D004625 ORTHO05D006054 5.1e-27 125.2 92 71.7
FAN20G2900 Fragaria x ananassa HOM05D004625 ORTHO05D006054 8.7e-27 124.4 92 70.7
Lj5A204T93 Lonicera japonica HOM05D004625 ORTHO05D006054 8.7e-27 124.4 92 71.7
Atru.chr5.2894 Acer truncatum HOM05D004625 ORTHO05D006054 1.1e-26 124.0 92 71.7
Dinv42107 Davidia involucrata HOM05D004625 ORTHO05D006054 1.1e-26 124.0 92 71.7
RcHm_v2.0_Chr6g0260791 Rosa chinensis HOM05D004625 ORTHO05D006054 5.6e-26 121.7 92 69.6
CANSAT25G0492 Cannabis sativa HOM05D004625 ORTHO05D006054 1.2e-25 120.6 92 68.5
TWI75G0995 Tripterygium wilfordii HOM05D004625 ORTHO05D006054 1.6e-25 120.2 92 67.4
Actinidia27924 Actinidia chinensis HOM05D004625 ORTHO05D006054 8.1e-25 117.9 90 68.9
Cpa.g.sc62.82 Carica papaya HOM05D004625 ORTHO05D006054 8.1e-25 117.9 92 69.6
Peaxi162Scf00016g01337 Petunia axillaris HOM05D004625 ORTHO05D006054 1.1e-24 117.5 92 67.4
Manes.15G145800 Manihot esculenta HOM05D004625 ORTHO05D006054 1.4e-24 117.1 92 70.7
Lsat_1_v5_gn_9_109140 Lactuca sativa HOM05D004625 ORTHO05D006054 1.8e-24 116.7 92 67.4
Phvul.011G050300 Phaseolus vulgaris HOM05D004625 ORTHO05D006054 2.4e-24 116.3 91 69.2
Nn5g29411 Nelumbo nucifera HOM05D004625 ORTHO05D006054 1.2e-23 114.0 90 66.7
Potri.004G147800 Populus trichocarpa HOM05D004625 ORTHO05D006054 1.2e-23 114.0 90 72.2
TAR381G0127 Trochodendron aralioides HOM05D004625 ORTHO05D006054 1.2e-23 114.0 92 66.3
vmacro19476 Vaccinium macrocarpon HOM05D004625 ORTHO05D006054 1.2e-23 114.0 90 65.6
Migut.B00290 Erythranthe guttata HOM05D004625 ORTHO05D006054 2.0e-23 113.2 92 66.3
DCAR_003628 Daucus carota HOM05D004625 ORTHO05D006054 2.6e-23 112.8 92 66.3
Rhsim05G0078500 Rhododendron simsii HOM05D004625 ORTHO05D006054 2.6e-23 112.8 90 64.4
CAN.G322.88 Capsicum annuum HOM05D004625 ORTHO05D006054 3.4e-23 112.5 92 65.2
Lalb_Chr19g0138511 Lupinus albus HOM05D004625 ORTHO05D006054 3.4e-23 112.5 89 66.3
MELO3C021931.2 Cucumis melo HOM05D004625 ORTHO05D006054 4.4e-23 112.1 92 64.1
CsaV3_2G014290 Cucumis sativus L. HOM05D004625 ORTHO05D006054 4.4e-23 112.1 92 64.1
Solyc01g109080.3 Solanum lycopersicum HOM05D004625 ORTHO05D006054 5.8e-23 111.7 92 66.3
Sopen01g051280 Solanum pennellii HOM05D004625 ORTHO05D006054 5.8e-23 111.7 92 66.3
arahy.Tifrunner.gnm1.ann1.33V1D5 Arachis hypogaea HOM05D004625 ORTHO05D006054 7.6e-23 111.3 91 65.9
Nitab4.5_0004946g0030 Nicotiana tabacum HOM05D004625 ORTHO05D006054 9.9e-23 110.9 92 66.3
Sabra04G0098100 Salix brachista HOM05D004625 ORTHO05D006054 1.3e-22 110.5 74 78.4
Ca_20826_v3 Cicer arietinum L. HOM05D004625 ORTHO05D006054 1.7e-22 110.2 91 68.1
RcHm_v2.0_Chr6g0259981 Rosa chinensis HOM05D004625 ORTHO05D006054 1.7e-22 110.2 92 66.3
Aqoxy6G00945 Aquilegia oxysepala HOM05D004625 ORTHO05D006054 2.2e-22 109.8 90 63.3
Glyma.11G123500 Glycine max HOM05D004625 ORTHO05D006054 2.2e-22 109.8 91 64.8
PGR142G2954 Punica granatum HOM05D004625 ORTHO05D006054 2.2e-22 109.8 91 64.8
Sed0024635 Sechium edule HOM05D004625 ORTHO05D006054 2.2e-22 109.8 92 64.1
ECA240G0059 Erigeron canadensis HOM05D004625 ORTHO05D006054 2.9e-22 109.4 92 63.0
arahy.Tifrunner.gnm1.ann1.5EIT1K Arachis hypogaea HOM05D004625 ORTHO05D006054 6.4e-22 108.2 91 64.8
AUR62011397 Chenopodium quinoa HOM05D004625 ORTHO05D006054 8.4e-22 107.8 90 61.1
HanXRQChr03g0074341 Helianthus annuus HOM05D004625 ORTHO05D006054 8.4e-22 107.8 95 63.2
ClCG09G017690 Citrullus lanatus HOM05D004625 ORTHO05D006054 1.4e-21 107.1 92 62.0
Medtr4g068580 Medicago truncatula HOM05D004625 ORTHO05D006054 1.4e-21 107.1 89 68.5
Cc02_g18180 Coffea canephora HOM05D004625 ORTHO05D006054 2.4e-21 106.3 92 63.0
SalBow6G1518 Salvia bowleyana HOM05D004625 ORTHO05D006054 2.4e-21 106.3 92 63.0
Sc14g0001720 Simmondsia chinensis HOM05D004625 ORTHO05D006054 2.4e-21 106.3 159 42.1
Hma1.2p1_1353F.1_g277680 Hydrangea macrophylla HOM05D004625 ORTHO05D006054 3.2e-21 105.9 92 66.3
AUR62016661 Chenopodium quinoa HOM05D004625 ORTHO05D006054 4.2e-21 105.5 90 60.0
Lj3g0006928 Lotus japonicus HOM05D004625 ORTHO05D006054 4.2e-21 105.5 91 63.7
MBI16_g13376_MAGBIO Magnolia biondii HOM05D004625 ORTHO05D006054 1.2e-20 104.0 89 64.0
SGA_v2.0_scaffold58G20593 Striga asiatica HOM05D004625 ORTHO05D006054 1.6e-20 103.6 73 72.6
TPR.G10228 Trifolium pratense HOM05D004625 ORTHO05D006054 2.1e-20 103.2 89 65.2
PSO541G5018 Papaver somniferum HOM05D004625 ORTHO05D006054 6.0e-20 101.7 85 62.4
EL10Ac9g21791 Beta vulgaris HOM05D004625 ORTHO05D006054 1.7e-19 100.1 90 60.0
Psat7g207400 Pisum sativum HOM05D004625 ORTHO05D006054 1.7e-19 100.1 89 65.2
unitig_0.g76 Utricularia gibba HOM05D004625 ORTHO05D006054 6.6e-19 98.2 92 58.7
Oeu035506.5 Olea europaea HOM05D004625 ORTHO05D006054 1.1e-18 97.4 78 65.4
THA.LOC104807342 Tarenaya hassleriana HOM05D004625 ORTHO05D006054 2.5e-18 96.3 72 69.4
Eucgr.I01219 Eucalyptus grandis HOM05D004625 ORTHO05D006054 5.6e-18 95.1 77 64.9
Aa31LG8G13460 Aethionema arabicum HOM05D004625 ORTHO05D006054 7.3e-18 94.7 163 38.0
AL3G47770 Arabidopsis lyrata HOM05D004625 ORTHO05D006054 3.6e-17 92.4 163 37.4
GSVIVG01031879001 Vitis vinifera HOM05D004625 ORTHO05D006054 1.4e-16 90.5 59 79.7
CARHR106270 Cardamine hirsuta HOM05D004625 ORTHO05D006054 4.0e-16 89.0 163 36.8
Psat3g017120 Pisum sativum HOM05D000030 ORTHO05D000009 6.9e-16 88.2 75 66.7
Sp3g29240 Schrenkiella parvula HOM05D004625 ORTHO05D006054 1.2e-15 87.4 163 38.0
BcaC06g36102 Brassica carinata HOM05D004625 ORTHO05D006054 3.4e-15 85.9 90 51.1
C07p07830 Brassica napus HOM05D004625 ORTHO05D006054 3.4e-15 85.9 90 51.1
BolC7t41201H Brassica oleracea HOM05D004625 ORTHO05D006054 3.4e-15 85.9 90 51.1
A07p04860 Brassica napus HOM05D004625 ORTHO05D006054 7.6e-15 84.7 90 51.1
BraA07t28278Z Brassica rapa HOM05D004625 ORTHO05D006054 7.6e-15 84.7 90 51.1
ATR0733G016 Amborella trichopoda HOM05D004625 ORTHO05D006054 2.2e-14 83.2 91 53.8
CDE02G3219 Ceratophyllum demersum HOM05D004625 ORTHO05D006054 1.1e-13 80.9 74 59.5
Thhalv10022517m.g Eutrema salsugineum HOM05D004625 ORTHO05D006054 2.4e-13 79.7 163 34.4
HPP92_012734 Vanilla planifolia HOM05D004625 ORTHO05D006054 2.1e-12 76.6 71 59.2
SEGI_25812 Sequoiadendron giganteum HOM05D004625 ORTHO05D006054 1.8e-08 63.5 74 48.6
Zm00001eb056540 Zea mays HOM05D004625 ORTHO05D006054 2.0e-07 60.1 63 54.0
AagrBONN_evm.TU.Sc2ySwM_362.351 Anthoceros agrestis HOM05D004625 ORTHO05D006054 5.8e-07 58.5 63 50.8


User provided reference genes

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