Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 0.0e+00 1399.0 1046 100.0
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 0.0e+00 1269.6 1046 94.6
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 0.0e+00 1114.4 1049 79.6
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 1.4e-311 1073.2 1108 74.8
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 8.6e-311 1070.5 1111 75.1
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 1.4e-310 1069.7 1060 78.3
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 2.1e-309 1065.8 1099 75.3
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 3.5e-309 1065.1 1050 77.0
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 3.6e-306 1055.0 1105 75.1
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 1.8e-305 1052.7 1105 74.2
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 4.4e-304 1048.1 1108 74.0
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 1.7e-300 1036.2 1112 73.4
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 5.1e-300 1034.6 1112 73.4
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 1.5e-299 1033.1 1109 74.6
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 3.6e-298 1028.5 1112 73.2
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.4e-296 1021.9 1077 78.6
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 7.6e-296 1020.8 1129 73.5
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 6.4e-295 1017.7 1067 75.0
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 1.1e-294 1016.9 1046 75.0
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 2.4e-294 1015.8 1084 76.9
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 1.6e-290 1003.0 1058 74.1
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 2.1e-290 1002.7 1048 73.6
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 3.6e-290 1001.9 1048 73.6
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 4.8e-290 1001.5 1084 74.9
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 6.2e-290 1001.1 1055 74.6
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 6.9e-289 997.7 1058 74.1
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 1.5e-288 996.5 1058 74.7
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 3.4e-288 995.3 1054 73.3
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 4.5e-288 995.0 1053 73.5
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 4.5e-288 995.0 1053 73.5
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 9.9e-288 993.8 1043 73.8
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 1.9e-286 989.6 1111 72.7
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 1.9e-286 989.6 1061 73.3
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 2.4e-286 989.2 1042 73.8
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 4.2e-286 988.4 1051 72.5
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 4.2e-286 988.4 1043 73.9
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 5.4e-286 988.0 1047 73.9
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 2.7e-285 985.7 1109 71.2
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 7.9e-285 984.2 1049 72.6
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 7.9e-285 984.2 1046 72.5
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 5.1e-284 981.5 1060 72.6
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 3.7e-282 975.3 1082 76.2
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 4.8e-282 974.9 1082 76.2
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 6.2e-282 974.5 1056 61.6
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 4.0e-281 971.8 1046 71.3
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.9e-279 965.7 1071 77.1
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 5.5e-278 961.4 1047 74.3
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 2.1e-277 959.5 1047 71.8
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 3.0e-276 955.7 1088 68.7
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 5.1e-276 954.9 1043 71.8
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 8.7e-276 954.1 1052 70.4
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 1.9e-275 953.0 1057 71.9
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 1.9e-275 953.0 1057 73.9
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.5e-275 952.6 1083 75.8
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 6.2e-274 948.0 1041 71.8
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 2.0e-272 943.0 1047 75.4
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 8.4e-271 937.6 1045 73.1
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 5.5e-270 934.9 1106 68.3
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 4.6e-269 931.8 1050 70.2
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 1.0e-268 930.6 1042 75.2
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 1.8e-265 919.8 1068 68.3
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 1.8e-265 919.8 1081 67.3
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 4.1e-265 918.7 1068 68.3
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 1.2e-264 917.1 1054 70.2
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 1.2e-264 917.1 1047 71.7
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 5.9e-264 914.8 1060 67.6
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 1.0e-263 914.1 1064 67.6
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 1.3e-263 913.7 1087 67.2
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 2.5e-262 909.4 1047 69.5
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 4.2e-262 908.7 1091 69.2
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 5.5e-262 908.3 1068 69.5
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 2.3e-260 902.9 1055 69.1
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 1.5e-259 900.2 1062 67.9
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 7.4e-259 897.9 1049 69.5
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 1.7e-258 896.7 1069 64.5
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 4.8e-258 895.2 1211 49.2
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 2.0e-256 889.8 1058 62.7
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 1.7e-255 886.7 1131 47.5
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 6.5e-255 884.8 485 88.2
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 2.5e-254 882.9 1045 73.7
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 1.2e-253 880.6 1046 68.1
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 4.7e-253 878.6 1061 66.4
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 7.9e-253 877.9 1045 74.0
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 4.1e-249 865.5 1077 66.9
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 1.3e-247 860.5 1062 66.0
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 1.7e-247 860.1 1028 67.7
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 4.2e-246 855.5 1050 67.6
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 5.3e-241 838.6 914 78.9
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 1.7e-239 833.6 1049 67.8
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 2.7e-237 826.2 487 80.5
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 1.8e-236 823.5 1048 67.7
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 2.8e-234 816.2 805 81.2
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.3e-231 807.4 488 78.7
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 2.9e-231 806.2 486 77.6
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 4.0e-220 769.2 807 67.0
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 3.0e-215 753.1 981 62.3
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 5.6e-214 748.8 487 73.3
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 1.1e-209 734.6 1041 56.2
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 3.9e-207 726.1 1071 58.2
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 2.0e-203 713.8 1043 61.7
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 2.6e-187 660.2 920 66.4
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 2.5e-182 643.7 483 64.4
TAR381G1622 Trochodendron aralioides HOM05D004966 ORTHO05D006199 9.0e-172 608.6 844 75.1
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 6.7e-167 592.4 990 54.7
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 2.0e-142 511.1 442 60.2
Lalb_Chr16g0389071 Lupinus albus HOM05D004966 ORTHO05D006199 1.3e-138 498.4 773 71.0
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 4.2e-137 493.4 1034 48.3
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 1.0e-135 488.8 1052 43.8
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 1.8e-116 424.9 253 77.9
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 8.6e-98 362.8 537 39.1
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 8.0e-96 356.3 204 79.9
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 1.2e-94 352.4 499 44.1
Sp7g35120 Schrenkiella parvula HOM05D004966 ORTHO05D006199 3.7e-93 347.4 702 59.3
MD15G1292300 Malus domestica HOM05D004966 ORTHO05D006199 9.2e-92 342.8 330 59.7
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 3.6e-88 330.9 202 76.2
CiPaw.01G008100 Carya illinoinensis HOM05D004966 ORTHO05D006199 5.2e-87 327.0 298 75.8
CAN.G1075.4 Capsicum annuum HOM05D004966 ORTHO05D006199 1.9e-76 292.0 340 50.9
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 7.3e-73 280.0 269 57.2
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 4.7e-72 277.3 452 36.5
BcaNung02943 Brassica carinata HOM05D004966 ORTHO05D006199 3.4e-70 271.2 166 78.3
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 4.6e-67 260.8 498 36.5
FAN23G2362 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.7e-66 258.8 329 56.2
Cpa.g.sc6.59 Carica papaya HOM05D004966 ORTHO05D006199 4.0e-55 221.1 177 68.4
Cpa.g.sc6.60 Carica papaya HOM05D004966 ORTHO05D006199 1.3e-45 189.5 99 85.9
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 4.9e-45 187.6 133 64.7
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 5.7e-41 174.1 183 51.9
CSS0022043 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.1e-39 168.3 112 75.9
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 6.5e-37 160.6 107 72.0
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 1.1e-36 159.8 107 72.0
Glyma.11G051067 Glycine max HOM05D004966 ORTHO05D006199 1.4e-36 159.5 134 67.9
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 6.1e-35 154.1 93 80.6
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 9.7e-33 146.7 93 74.2
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.3e-29 136.3 74 79.7
BcaNung02945 Brassica carinata HOM05D004966 ORTHO05D006199 2.5e-28 132.1 93 68.8
RcHm_v2.0_Chr1g0315291 Rosa chinensis HOM05D004966 ORTHO05D006199 2.7e-27 128.6 76 82.9
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 1.9e-20 105.9 105 56.2
Phvul.002G013866 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 5.5e-20 104.4 84 66.7
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 2.0e-17 95.9 129 42.6
ATR0030G036 Amborella trichopoda HOM05D004966 ORTHO05D006199 2.6e-14 85.5 120 41.7
CBR_g36362 Chara braunii HOM05D004966 ORTHO05D006199 2.1e-11 75.9 145 35.2
CSS0024681 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 7.5e-09 67.4 43 74.4
CSS0029353 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.1e-07 63.5 59 59.3
BcaC09g51691 Brassica carinata HOM05D003801 ORTHO05D017532 7.0e-07 60.8 98 40.8
HanXRQChr06g0176501 Helianthus annuus HOM05D004966 ORTHO05D006199 2.7e-06 58.9 46 65.2
Lsat_1_v5_gn_8_118440 Lactuca sativa HOM05D004966 ORTHO05D231273 3.5e-06 58.5 49 46.9


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