Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa003872 Carpinus fangiana HOM05D004048 ORTHO05D004859 1.7e-168 595.9 297 100.0
Haze_15565 Corylus avellana HOM05D004048 ORTHO05D004859 1.8e-72 276.9 361 51.5
CiPaw.02G034800 Carya illinoinensis HOM05D004048 ORTHO05D004859 1.7e-62 243.8 352 48.6
Dinv32522 Davidia involucrata HOM05D004048 ORTHO05D004859 1.8e-61 240.4 363 46.0
CSS0027402 Camellia sinensis var. sinensis HOM05D004048 ORTHO05D004859 6.5e-59 231.9 357 44.8
CSS0029554 Camellia sinensis var. sinensis HOM05D004048 ORTHO05D004859 1.9e-58 230.3 357 44.5
Manes.05G029300 Manihot esculenta HOM05D004048 ORTHO05D004859 9.4e-58 228.0 358 43.6
Potri.014G090500 Populus trichocarpa HOM05D004048 ORTHO05D004859 1.2e-57 227.6 359 42.9
QL04p055532 Quercus lobata HOM05D004048 ORTHO05D004859 2.7e-57 226.5 363 44.9
Ciclev10020577m.g Citrus clementina HOM05D004048 ORTHO05D004859 3.6e-57 226.1 341 44.0
Thecc.01G352400 Theobroma cacao HOM05D004048 ORTHO05D004859 6.1e-57 225.3 358 44.4
Sabra14G0065600 Salix brachista HOM05D004048 ORTHO05D004859 7.9e-57 224.9 358 43.9
TWI23G0617 Tripterygium wilfordii HOM05D004048 ORTHO05D004859 1.0e-56 224.6 361 44.9
COL.COLO4_12778 Corchorus olitorius HOM05D004048 ORTHO05D004859 1.4e-56 224.2 358 43.6
Hund27241 Selenicereus undatus HOM05D004048 ORTHO05D004859 1.4e-56 224.2 356 44.9
TAR375G1056 Trochodendron aralioides HOM05D004048 ORTHO05D004859 1.4e-56 224.2 362 44.2
vmacro13227 Vaccinium macrocarpon HOM05D004048 ORTHO05D004859 1.4e-56 224.2 340 45.0
Cpa.g.sc11.73 Carica papaya HOM05D004048 ORTHO05D004859 2.3e-56 223.4 327 45.0
Migut.B01799 Erythranthe guttata HOM05D004048 ORTHO05D004859 6.7e-56 221.9 362 42.5
Rhsim07G0205800 Rhododendron simsii HOM05D004048 ORTHO05D004859 8.8e-56 221.5 390 43.1
Prupe.2G177600 Prunus persica HOM05D004048 ORTHO05D004859 1.1e-55 221.1 350 44.3
MD07G1131200 Malus domestica HOM05D004048 ORTHO05D004859 1.5e-55 220.7 352 43.8
FvH4_7g15370 Fragaria vesca HOM05D004048 ORTHO05D004859 3.3e-55 219.5 352 42.3
FAN06G1753 Fragaria x ananassa HOM05D004048 ORTHO05D004859 3.3e-55 219.5 352 42.3
EL10Ac1g00354 Beta vulgaris HOM05D004048 ORTHO05D004859 4.4e-55 219.2 326 43.6
Sp5g01880 Schrenkiella parvula HOM05D004048 ORTHO05D004859 4.4e-55 219.2 334 44.6
Lj9C589T5 Lonicera japonica HOM05D004048 ORTHO05D004859 9.7e-55 218.0 329 45.6
Thhalv10001521m.g Eutrema salsugineum HOM05D004048 ORTHO05D004859 2.2e-54 216.9 336 44.6
AT2G46110 Arabidopsis thaliana HOM05D004048 ORTHO05D004859 2.8e-54 216.5 351 43.6
CAN.G439.29 Capsicum annuum HOM05D004048 ORTHO05D004859 2.8e-54 216.5 356 43.3
FAN10G1698 Fragaria x ananassa HOM05D004048 ORTHO05D004859 3.7e-54 216.1 352 41.8
FAN10G3606 Fragaria x ananassa HOM05D004048 ORTHO05D004859 3.7e-54 216.1 352 41.8
Duzib268G0835 Durio zibethinus HOM05D004048 ORTHO05D004859 4.8e-54 215.7 358 43.0
Actinidia10075 Actinidia chinensis HOM05D004048 ORTHO05D004859 6.3e-54 215.3 340 43.5
A07p25550 Brassica napus HOM05D004048 ORTHO05D004859 6.3e-54 215.3 336 44.9
AUR62004413 Chenopodium quinoa HOM05D004048 ORTHO05D004859 8.2e-54 214.9 346 42.2
THA.LOC104817317 Tarenaya hassleriana HOM05D004048 ORTHO05D004859 8.2e-54 214.9 344 43.9
Sc01g0003210 Simmondsia chinensis HOM05D004048 ORTHO05D004859 1.1e-53 214.5 355 42.8
Aa31LG10G15450 Aethionema arabicum HOM05D004048 ORTHO05D004859 1.4e-53 214.2 336 44.3
BcaB02g07374 Brassica carinata HOM05D004048 ORTHO05D004859 1.4e-53 214.2 338 44.7
Nn1g01686 Nelumbo nucifera HOM05D004048 ORTHO05D004859 1.4e-53 214.2 355 42.0
AL5G43890 Arabidopsis lyrata HOM05D004048 ORTHO05D004859 1.8e-53 213.8 352 43.8
AT3G61530 Arabidopsis thaliana HOM05D004048 ORTHO05D004859 1.8e-53 213.8 348 44.5
FAN06G0189 Fragaria x ananassa HOM05D004048 ORTHO05D004859 1.8e-53 213.8 367 41.4
PSO170G0644 Papaver somniferum HOM05D004048 ORTHO05D004859 1.8e-53 213.8 349 43.3
Sp4g28180 Schrenkiella parvula HOM05D004048 ORTHO05D004859 1.8e-53 213.8 351 42.7
C06p27540 Brassica napus HOM05D004048 ORTHO05D004859 2.4e-53 213.4 336 44.6
BolC6t37921H Brassica oleracea HOM05D004048 ORTHO05D004859 2.4e-53 213.4 336 44.6
BraA07t30196Z Brassica rapa HOM05D004048 ORTHO05D004859 2.4e-53 213.4 336 44.6
Gohir.D08G043100 Gossypium hirsutum HOM05D004048 ORTHO05D004859 3.1e-53 213.0 352 42.3
PGR004G0897 Punica granatum HOM05D004048 ORTHO05D004859 3.1e-53 213.0 343 43.4
Carub.0004s2881 Capsella rubella HOM05D004048 ORTHO05D004859 4.1e-53 212.6 351 43.3
RcHm_v2.0_Chr1g0357691 Rosa chinensis HOM05D004048 ORTHO05D004859 4.1e-53 212.6 354 41.5
BcaC08g45130 Brassica carinata HOM05D004048 ORTHO05D004859 5.3e-53 212.2 336 44.3
Nitab4.5_0000615g0020 Nicotiana tabacum HOM05D004048 ORTHO05D004859 5.3e-53 212.2 364 42.6
Atru.chr7.1494 Acer truncatum HOM05D004048 ORTHO05D004859 7.0e-53 211.8 345 43.8
BcaC07g42671 Brassica carinata HOM05D004048 ORTHO05D004859 7.0e-53 211.8 283 48.1
Gorai.004G041700 Gossypium raimondii HOM05D004048 ORTHO05D004859 7.0e-53 211.8 352 42.3
Hma1.2p1_0335F.1_g128890 Hydrangea macrophylla HOM05D004048 ORTHO05D004859 7.0e-53 211.8 322 44.1
A09p53600 Brassica napus HOM05D004048 ORTHO05D004859 1.2e-52 211.1 326 43.9
Peaxi162Scf00217g00711 Petunia axillaris HOM05D004048 ORTHO05D004859 1.2e-52 211.1 338 44.4
FAN03G0096 Fragaria x ananassa HOM05D004048 ORTHO05D004859 1.5e-52 210.7 352 41.2
BcaC07g40671 Brassica carinata HOM05D004048 ORTHO05D004859 2.6e-52 209.9 338 42.9
Solyc09g007130.3 Solanum lycopersicum HOM05D004048 ORTHO05D004859 2.6e-52 209.9 361 41.8
DCAR_025214 Daucus carota HOM05D004048 ORTHO05D004859 3.5e-52 209.5 352 41.5
Gohir.A08G032200 Gossypium hirsutum HOM05D004048 ORTHO05D004859 4.5e-52 209.1 352 41.2
BcaC07g40651 Brassica carinata HOM05D004048 ORTHO05D004859 5.9e-52 208.8 326 43.9
BolC8t51222H Brassica oleracea HOM05D004048 ORTHO05D004859 5.9e-52 208.8 326 43.9
Carub.0005s2822 Capsella rubella HOM05D004048 ORTHO05D004859 7.7e-52 208.4 324 44.4
PGSC0003DMG400002011 Solanum tuberosum HOM05D004048 ORTHO05D004859 1.0e-51 208.0 352 41.8
RcHm_v2.0_Chr1g0357711 Rosa chinensis HOM05D004048 ORTHO05D004859 1.3e-51 207.6 336 40.8
PSO063G1481 Papaver somniferum HOM05D004048 ORTHO05D004859 2.2e-51 206.8 336 43.5
ClCG09G009090 Citrullus lanatus HOM05D004048 ORTHO05D004859 3.8e-51 206.1 316 44.0
Nitab4.5_0005222g0030 Nicotiana tabacum HOM05D004048 ORTHO05D004859 3.8e-51 206.1 361 41.3
C08p36390 Brassica napus HOM05D004048 ORTHO05D004859 5.0e-51 205.7 326 43.6
Duzib138G1147 Durio zibethinus HOM05D004048 ORTHO05D004859 6.5e-51 205.3 377 40.6
SGA_v2.0_scaffold4G02279 Striga asiatica HOM05D004048 ORTHO05D004859 6.5e-51 205.3 327 43.7
Cc02_g21240 Coffea canephora HOM05D004048 ORTHO05D004859 1.9e-50 203.8 333 42.3
BraA09t40782Z Brassica rapa HOM05D004048 ORTHO05D004859 3.2e-50 203.0 326 43.6
Gorai.004G160400 Gossypium raimondii HOM05D004048 ORTHO05D004859 9.4e-50 201.4 359 39.8
Aqoxy5G04084 Aquilegia oxysepala HOM05D004048 ORTHO05D004859 1.2e-49 201.1 354 41.8
CsaV3_7G025860 Cucumis sativus L. HOM05D004048 ORTHO05D004859 2.1e-49 200.3 348 40.2
CANSAT56G4107 Cannabis sativa HOM05D004048 ORTHO05D004859 2.7e-49 199.9 363 41.9
MBI03_g34597_MAGBIO Magnolia biondii HOM05D004048 ORTHO05D004859 4.7e-49 199.1 326 42.6
VMungo0331G0386 Vigna mungo HOM05D004048 ORTHO05D004859 4.7e-49 199.1 349 42.4
Gohir.D08G154300 Gossypium hirsutum HOM05D004048 ORTHO05D004859 6.1e-49 198.7 359 39.6
Eucgr.B01988 Eucalyptus grandis HOM05D004048 ORTHO05D004859 8.0e-49 198.4 332 43.1
FAN06G1997 Fragaria x ananassa HOM05D004048 ORTHO05D004859 3.0e-48 196.4 329 41.9
MELO3C014805.2 Cucumis melo HOM05D004048 ORTHO05D004859 3.9e-48 196.1 338 40.2
Lalb_Chr17g0338041 Lupinus albus HOM05D004048 ORTHO05D004859 5.2e-48 195.7 349 40.4
Lj5g0009706 Lotus japonicus HOM05D004048 ORTHO05D004859 8.8e-48 194.9 343 41.7
Lj1g0027864 Lotus japonicus HOM05D004048 ORTHO05D004859 1.1e-47 194.5 344 40.4
arahy.Tifrunner.gnm1.ann1.9CR96V Arachis hypogaea HOM05D004048 ORTHO05D004859 2.0e-47 193.7 326 41.7
Oeu054354.2 Olea europaea HOM05D004048 ORTHO05D004859 5.7e-47 192.2 372 39.0
HPP92_005267 Vanilla planifolia HOM05D004048 ORTHO05D004859 7.4e-47 191.8 324 40.7
arahy.Tifrunner.gnm1.ann1.8BBS1S Arachis hypogaea HOM05D004048 ORTHO05D004859 9.7e-47 191.4 326 41.4
CARHR107270 Cardamine hirsuta HOM05D004048 ORTHO05D004859 9.7e-47 191.4 325 44.0
HanXRQChr17g0562171 Helianthus annuus HOM05D004048 ORTHO05D004859 1.3e-46 191.0 338 40.5
Lsat_1_v5_gn_4_35260 Lactuca sativa HOM05D004048 ORTHO05D004859 1.3e-46 191.0 339 40.4
Medtr8g028555 Medicago truncatula HOM05D004048 ORTHO05D004859 1.7e-46 190.7 339 41.9
Psat4g156920 Pisum sativum HOM05D004048 ORTHO05D004859 1.7e-46 190.7 328 43.0
TPR.G28287 Trifolium pratense HOM05D004048 ORTHO05D004859 6.3e-46 188.7 351 41.0
Rhsim07G0010400 Rhododendron simsii HOM05D004048 ORTHO05D004859 1.1e-45 188.0 337 43.3
unitig_60.g25627 Utricularia gibba HOM05D004048 ORTHO05D004859 1.8e-45 187.2 328 40.5
arahy.Tifrunner.gnm1.ann1.8G3C0P Arachis hypogaea HOM05D004048 ORTHO05D004859 3.1e-45 186.4 326 39.9
FAN10G3616 Fragaria x ananassa HOM05D004048 ORTHO05D004859 4.1e-45 186.0 374 38.0
Glyma.07G064600 Glycine max HOM05D004048 ORTHO05D004859 4.1e-45 186.0 349 40.1
Nn6g32447 Nelumbo nucifera HOM05D004048 ORTHO05D004859 2.0e-44 183.7 291 41.2
Rhsim07G0206900 Rhododendron simsii HOM05D004048 ORTHO05D004859 2.0e-44 183.7 387 37.5
Ca_03490_v3 Cicer arietinum L. HOM05D004048 ORTHO05D004859 2.6e-44 183.3 377 37.7
TPR.G37181 Trifolium pratense HOM05D004048 ORTHO05D004859 5.9e-44 182.2 329 40.7
AUR62022619 Chenopodium quinoa HOM05D004048 ORTHO05D004859 3.2e-42 176.4 302 40.7
MELO3C012767.2 Cucumis melo HOM05D004048 ORTHO05D004859 5.5e-42 175.6 406 34.7
SEGI_12250 Sequoiadendron giganteum HOM05D004048 ORTHO05D004859 2.1e-41 173.7 331 37.5
GSVIVG01026967001 Vitis vinifera HOM05D004048 ORTHO05D004859 6.1e-41 172.2 95 84.2
FvH4_7g15371 Fragaria vesca HOM05D004048 ORTHO05D004859 2.3e-40 170.2 360 36.9
Sopen09g002000 Solanum pennellii HOM05D004048 ORTHO05D004859 2.8e-38 163.3 92 83.7
FAN01G2460 Fragaria x ananassa HOM05D004048 ORTHO05D004859 3.7e-38 162.9 95 78.9
Eucgr.B01984 Eucalyptus grandis HOM05D004048 ORTHO05D004859 1.1e-37 161.4 325 39.1
Medtr4g037315 Medicago truncatula HOM05D004048 ORTHO05D004859 1.4e-37 161.0 100 78.0
Glyma.09G254700 Glycine max HOM05D004048 ORTHO05D004859 9.1e-37 158.3 349 36.1
Medtr4g037305 Medicago truncatula HOM05D004048 ORTHO05D004859 9.1e-37 158.3 94 80.9
Phvul.010G104900 Phaseolus vulgaris HOM05D004048 ORTHO05D004859 9.1e-37 158.3 96 81.2
FAN10G1509 Fragaria x ananassa HOM05D004048 ORTHO05D004859 1.2e-36 157.9 95 75.8
Ah.05g180160 Amaranthus hybridus HOM05D004048 ORTHO05D004859 1.6e-36 157.5 324 38.6
PGSC0003DMG400018716 Solanum tuberosum HOM05D004048 ORTHO05D004859 4.5e-36 156.0 87 83.9
AL4G45340 Arabidopsis lyrata HOM05D004048 ORTHO05D004859 5.9e-36 155.6 92 78.3
Lj6g0001313 Lotus japonicus HOM05D004048 ORTHO05D004859 2.2e-35 153.7 94 76.6
Gohir.A08G133000 Gossypium hirsutum HOM05D004048 ORTHO05D004859 1.1e-34 151.4 95 74.7
Os01g0225400 Oryza sativa ssp. japonica HOM05D004048 ORTHO05D004859 7.2e-34 148.7 90 75.6
SMO144G0210 Selaginella moellendorffii HOM05D004048 ORTHO05D004859 8.0e-33 145.2 354 33.3
Mapoly0035s0043 Marchantia polymorpha HOM05D004048 ORTHO05D004859 1.0e-32 144.8 356 33.4
CDE11G0110 Ceratophyllum demersum HOM05D004048 ORTHO05D004859 2.3e-32 143.7 90 74.4
Pp3c7_220 Physcomitrium patens HOM05D004048 ORTHO05D004859 2.0e-31 140.6 339 33.3
Cre12.g508550 Chlamydomonas reinhardtii HOM05D004048 ORTHO05D004859 3.4e-31 139.8 332 34.0
AagrBONN_evm.TU.Sc2ySwM_117.2358 Anthoceros agrestis HOM05D004048 ORTHO05D004859 4.4e-31 139.4 334 33.8
AagrBONN_evm.TU.Sc2ySwM_117.1042 Anthoceros agrestis HOM05D004048 ORTHO05D004859 5.7e-31 139.0 353 33.1
arahy.Tifrunner.gnm1.ann1.63JPLQ Arachis hypogaea HOM05D004048 ORTHO05D004859 2.2e-30 137.1 82 78.0
Os01g0225500 Oryza sativa ssp. japonica HOM05D004048 ORTHO05D004859 2.0e-28 130.6 313 34.2
MCO13G154 Micromonas commoda HOM05D004048 ORTHO05D004859 5.9e-28 129.0 336 34.2
SEGI_25526 Sequoiadendron giganteum HOM05D004048 ORTHO05D004859 3.0e-24 116.7 84 60.7
ECA234G0147 Erigeron canadensis HOM05D004048 ORTHO05D004859 4.0e-24 116.3 72 75.0
CBR_g45417 Chara braunii HOM05D004048 ORTHO05D004859 8.9e-24 115.2 312 31.1
Potri.002G164601 Populus trichocarpa HOM05D004048 ORTHO05D004859 4.4e-23 112.8 76 71.1
ATR0751G274 Amborella trichopoda HOM05D004048 ORTHO05D004859 2.2e-22 110.5 73 67.1
Eucgr.B01986 Eucalyptus grandis HOM05D004048 ORTHO05D004859 2.2e-22 110.5 102 54.9
arahy.Tifrunner.gnm1.ann1.DMYH1R Arachis hypogaea HOM05D004048 ORTHO05D004859 2.8e-22 110.2 73 71.2
TPR.G28294 Trifolium pratense HOM05D004048 ORTHO05D004859 6.3e-22 109.0 72 73.6
AL4G45350 Arabidopsis lyrata HOM05D004048 ORTHO05D038698 4.5e-20 102.8 67 74.6
SMO356G0035 Selaginella moellendorffii HOM05D004048 ORTHO05D004859 2.3e-19 100.5 88 56.8
FAN06G4041 Fragaria x ananassa HOM05D004048 ORTHO05D004859 8.6e-19 98.6 260 33.8
SMO119G0299 Selaginella moellendorffii HOM05D004048 ORTHO05D004859 6.8e-16 89.0 62 64.5
Zm00001eb339000 Zea mays HOM05D004048 ORTHO05D004859 3.7e-14 83.2 56 73.2
arahy.Tifrunner.gnm1.ann1.CIF5FW Arachis hypogaea HOM05D004048 ORTHO05D004859 3.2e-13 80.1 52 71.2
ATR0751G082 Amborella trichopoda HOM05D004048 ORTHO05D004859 5.4e-13 79.3 53 69.8
SHI16536 Sapria himalayana HOM05D004048 ORTHO05D004859 9.2e-13 78.6 48 77.1
FAN10G2371 Fragaria x ananassa HOM05D004048 ORTHO05D038698 1.6e-12 77.8 60 66.7
SEGI_21771 Sequoiadendron giganteum HOM05D004048 ORTHO05D004859 3.5e-12 76.6 51 68.6
PRCOL_00005166 Prasinoderma coloniale HOM05D004048 ORTHO05D004859 4.3e-10 69.7 341 24.9
ATR0751G137 Amborella trichopoda HOM05D004048 ORTHO05D004859 7.3e-10 68.9 49 69.4


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