Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa001622 Carpinus fangiana HOM05D003684 ORTHO05D125656 0.0e+00 2868.6 1474 100.0
ATR1136G078 Amborella trichopoda HOM05D003684 ORTHO05D004428 1.4e-08 67.0 157 27.4
Zm00001eb108610 Zea mays HOM05D003684 ORTHO05D004428 1.5e-07 63.5 154 29.2
Sp6g34450 Schrenkiella parvula HOM05D003684 ORTHO05D004428 2.0e-07 63.2 219 25.1
Cpa.g.sc138.52 Carica papaya HOM05D003684 ORTHO05D004428 4.4e-07 62.0 154 27.9
Sabra19G0000700 Salix brachista HOM05D003684 ORTHO05D004428 5.8e-07 61.6 147 27.2
Sabra19G0012100 Salix brachista HOM05D003684 ORTHO05D004428 5.8e-07 61.6 147 27.2
CARHR204550 Cardamine hirsuta HOM05D003684 ORTHO05D004428 7.5e-07 61.2 161 25.5
BcaB01g05594 Brassica carinata HOM05D003684 ORTHO05D004428 9.8e-07 60.8 161 25.5
A03p03860 Brassica napus HOM05D003684 ORTHO05D004428 9.8e-07 60.8 161 25.5
C03p04350 Brassica napus HOM05D003684 ORTHO05D004428 9.8e-07 60.8 161 25.5
BolC3t12968H Brassica oleracea HOM05D003684 ORTHO05D004428 9.8e-07 60.8 161 25.5
BraA03t09733Z Brassica rapa HOM05D003684 ORTHO05D004428 9.8e-07 60.8 161 25.5
A10p28300 Brassica napus HOM05D003684 ORTHO05D004428 1.3e-06 60.5 161 25.5
BraA10t44878Z Brassica rapa HOM05D003684 ORTHO05D004428 1.3e-06 60.5 161 25.5
Os07g0477500 Oryza sativa ssp. japonica HOM05D003684 ORTHO05D004428 1.3e-06 60.5 177 26.0
Aa31LG3G18080 Aethionema arabicum HOM05D003684 ORTHO05D004428 1.7e-06 60.1 154 26.0
Zm00001eb178520 Zea mays HOM05D003684 ORTHO05D004428 1.7e-06 60.1 161 27.3
AT5G08450 Arabidopsis thaliana HOM05D003684 ORTHO05D004428 2.2e-06 59.7 161 24.8
Thhalv10012626m.g Eutrema salsugineum HOM05D003684 ORTHO05D004428 2.2e-06 59.7 161 24.8
Psat6g111880 Pisum sativum HOM05D003684 ORTHO05D004428 2.2e-06 59.7 154 27.3
Potri.018G145560 Populus trichocarpa HOM05D003684 ORTHO05D004428 2.2e-06 59.7 154 26.6
TAR381G1133 Trochodendron aralioides HOM05D003684 ORTHO05D004428 2.2e-06 59.7 154 27.9
Potri.018G145546 Populus trichocarpa HOM05D003684 ORTHO05D004428 2.9e-06 59.3 154 26.6
THA.LOC104818396 Tarenaya hassleriana HOM05D003684 ORTHO05D004428 2.9e-06 59.3 161 25.5
Ah.06g188290 Amaranthus hybridus HOM05D003684 ORTHO05D004428 3.7e-06 58.9 154 27.3
Carub.0006s0737 Capsella rubella HOM05D003684 ORTHO05D004428 3.7e-06 58.9 161 24.8
Lsat_1_v5_gn_1_130380 Lactuca sativa HOM05D003684 ORTHO05D004428 3.7e-06 58.9 154 27.3
Duzib213G0690 Durio zibethinus HOM05D003684 ORTHO05D004428 4.9e-06 58.5 154 26.6
COL.COLO4_36995 Corchorus olitorius HOM05D003684 ORTHO05D004428 6.4e-06 58.2 154 26.6
Duzib187G1616 Durio zibethinus HOM05D003684 ORTHO05D004428 6.4e-06 58.2 154 26.6
Potri.004G135800 Populus trichocarpa HOM05D003684 ORTHO05D004428 6.4e-06 58.2 154 26.6
Sabra04G0082300 Salix brachista HOM05D003684 ORTHO05D004428 6.4e-06 58.2 154 26.6
Thecc.07G170900 Theobroma cacao HOM05D003684 ORTHO05D004428 6.4e-06 58.2 154 26.6


User provided reference genes

Program Settings