Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa000706 Carpinus fangiana HOM05D006866 ORTHO05D008689 4.7e-114 416.0 196 100.0
Haze_06061 Corylus avellana HOM05D006866 ORTHO05D008689 3.0e-108 396.7 192 97.9
CiPaw.10G064300 Carya illinoinensis HOM05D006866 ORTHO05D008689 3.2e-94 350.1 191 88.0
QL11p016582 Quercus lobata HOM05D006866 ORTHO05D008689 3.3e-83 313.5 230 67.0
GSVIVG01012065001 Vitis vinifera HOM05D006866 ORTHO05D008689 1.8e-76 291.2 191 71.7
CSS0001165 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 3.0e-76 290.4 196 69.4
Prupe.4G112600 Prunus persica HOM05D006866 ORTHO05D008689 3.9e-76 290.0 193 72.5
MD10G1231700 Malus domestica HOM05D006866 ORTHO05D008689 3.3e-75 287.0 178 76.4
TWI38G1826 Tripterygium wilfordii HOM05D006866 ORTHO05D008689 1.7e-74 284.6 191 69.1
COL.COLO4_30996 Corchorus olitorius HOM05D006866 ORTHO05D008689 2.2e-74 284.3 196 68.4
CANSAT35G0964 Cannabis sativa HOM05D006866 ORTHO05D008689 4.8e-74 283.1 192 71.9
FAN21G0631 Fragaria x ananassa HOM05D006866 ORTHO05D008689 4.8e-74 283.1 185 73.0
Gorai.011G048600 Gossypium raimondii HOM05D006866 ORTHO05D008689 6.3e-74 282.7 192 68.8
Potri.012G123600 Populus trichocarpa HOM05D006866 ORTHO05D008689 8.2e-74 282.3 191 67.5
Sabra12G0093800 Salix brachista HOM05D006866 ORTHO05D008689 1.1e-73 282.0 196 65.3
Thecc.06G143300 Theobroma cacao HOM05D006866 ORTHO05D008689 1.1e-73 282.0 192 69.3
Actinidia22399 Actinidia chinensis HOM05D006866 ORTHO05D008689 1.8e-73 281.2 191 68.1
Duzib160G0228 Durio zibethinus HOM05D006866 ORTHO05D008689 2.4e-73 280.8 184 70.7
TAR626G0654 Trochodendron aralioides HOM05D006866 ORTHO05D008689 3.1e-73 280.4 174 73.6
FvH4_3g12360 Fragaria vesca HOM05D006866 ORTHO05D008689 9.1e-73 278.9 185 72.4
Dinv01379 Davidia involucrata HOM05D006866 ORTHO05D008689 1.5e-72 278.1 173 73.4
CSS0037136 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 2.0e-72 277.7 192 68.8
Oeu060351.1 Olea europaea HOM05D006866 ORTHO05D008689 3.4e-72 276.9 191 66.5
RcHm_v2.0_Chr5g0020151 Rosa chinensis HOM05D006866 ORTHO05D008689 7.7e-72 275.8 185 70.8
MELO3C021744.2 Cucumis melo HOM05D006866 ORTHO05D008689 2.9e-71 273.9 191 66.0
CsaV3_1G046260 Cucumis sativus L. HOM05D006866 ORTHO05D008689 6.5e-71 272.7 191 65.4
Solyc02g068760.4 Solanum lycopersicum HOM05D006866 ORTHO05D008689 6.5e-71 272.7 193 64.8
ClCG01G009530 Citrullus lanatus HOM05D006866 ORTHO05D008689 1.1e-70 271.9 195 65.1
CAN.G149.30 Capsicum annuum HOM05D006866 ORTHO05D008689 3.6e-69 266.9 191 63.9
Gohir.A10G044500 Gossypium hirsutum HOM05D006866 ORTHO05D008689 4.7e-69 266.5 169 74.0
Sopen02g017930 Solanum pennellii HOM05D006866 ORTHO05D008689 6.1e-69 266.2 191 64.4
PGSC0003DMG400010422 Solanum tuberosum HOM05D006866 ORTHO05D008689 6.1e-69 266.2 191 64.9
Gohir.D10G045700 Gossypium hirsutum HOM05D006866 ORTHO05D008689 7.9e-69 265.8 169 73.4
Lalb_Chr02g0143291 Lupinus albus HOM05D006866 ORTHO05D008689 7.9e-69 265.8 194 63.4
Nitab4.5_0001288g0160 Nicotiana tabacum HOM05D006866 ORTHO05D008689 7.9e-69 265.8 198 63.1
Peaxi162Scf00149g00318 Petunia axillaris HOM05D006866 ORTHO05D008689 7.9e-69 265.8 192 63.5
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 7.9e-69 265.8 183 66.1
FAN25G0624 Fragaria x ananassa HOM05D006866 ORTHO05D008689 1.4e-68 265.0 185 70.3
Nn7g38175 Nelumbo nucifera HOM05D006866 ORTHO05D008689 1.1e-67 261.9 196 60.7
BcaB02g09476 Brassica carinata HOM05D006866 ORTHO05D008689 1.5e-67 261.5 197 62.4
BolC4t22960H Brassica oleracea HOM05D006866 ORTHO05D008689 4.4e-67 260.0 197 61.9
Cc09_g06040 Coffea canephora HOM05D006866 ORTHO05D008689 1.7e-66 258.1 191 62.8
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 2.2e-66 257.7 191 62.8
Aa31LG9G16090 Aethionema arabicum HOM05D006866 ORTHO05D008689 2.8e-66 257.3 191 62.8
DCAR_001319 Daucus carota HOM05D006866 ORTHO05D008689 6.3e-66 256.1 192 62.0
Aqoxy1G01457 Aquilegia oxysepala HOM05D006866 ORTHO05D008689 8.2e-66 255.8 195 61.0
Ca_25672_v3 Cicer arietinum L. HOM05D006866 ORTHO05D008689 1.1e-65 255.4 187 63.1
Glyma.20G109800 Glycine max HOM05D006866 ORTHO05D008689 1.4e-65 255.0 187 62.6
Thhalv10017758m.g Eutrema salsugineum HOM05D006866 ORTHO05D008689 1.8e-65 254.6 191 61.3
vmacro03523 Vaccinium macrocarpon HOM05D006866 ORTHO05D008689 1.8e-65 254.6 220 56.8
AUR62006933 Chenopodium quinoa HOM05D006866 ORTHO05D008689 2.4e-65 254.2 182 62.1
AUR62006935 Chenopodium quinoa HOM05D006866 ORTHO05D008689 3.1e-65 253.8 182 61.5
arahy.Tifrunner.gnm1.ann1.X32MFV Arachis hypogaea HOM05D006866 ORTHO05D008689 5.3e-65 253.1 187 64.2
Sabra12G0093100 Salix brachista HOM05D006866 ORTHO05D008689 5.3e-65 253.1 157 70.7
BraA05t20001Z Brassica rapa HOM05D006866 ORTHO05D008689 7.0e-65 252.7 192 62.5
AT2G35130 Arabidopsis thaliana HOM05D006866 ORTHO05D008689 9.1e-65 252.3 191 61.8
A05p10610 Brassica napus HOM05D006866 ORTHO05D008689 1.2e-64 251.9 192 62.5
Lj5g0008795 Lotus japonicus HOM05D006866 ORTHO05D008689 1.2e-64 251.9 183 63.4
C04p13710 Brassica napus HOM05D006866 ORTHO05D008689 2.0e-64 251.1 192 62.0
Sp4g17360 Schrenkiella parvula HOM05D006866 ORTHO05D008689 2.0e-64 251.1 192 61.5
TPR.G2424 Trifolium pratense HOM05D006866 ORTHO05D008689 2.0e-64 251.1 187 62.6
VMungo0720G0148 Vigna mungo HOM05D006866 ORTHO05D008689 2.6e-64 250.8 187 61.5
MBI18_g11481_MAGBIO Magnolia biondii HOM05D006866 ORTHO05D008689 5.9e-64 249.6 189 63.0
AL4G31140 Arabidopsis lyrata HOM05D006866 ORTHO05D008689 1.3e-63 248.4 182 62.1
Carub.0004s1681 Capsella rubella HOM05D006866 ORTHO05D008689 1.3e-63 248.4 159 68.6
Eucgr.D00981 Eucalyptus grandis HOM05D006866 ORTHO05D008689 1.3e-63 248.4 187 63.1
THA.LOC104814359 Tarenaya hassleriana HOM05D006866 ORTHO05D008689 1.7e-63 248.1 183 62.8
Psat6g231320 Pisum sativum HOM05D006866 ORTHO05D008689 5.0e-63 246.5 187 61.5
EL10Ac4g09707 Beta vulgaris HOM05D006866 ORTHO05D008689 2.5e-62 244.2 182 59.3
HanXRQChr09g0258331 Helianthus annuus HOM05D006866 ORTHO05D008689 5.5e-62 243.0 180 62.8
Medtr1g112240 Medicago truncatula HOM05D006866 ORTHO05D008689 5.5e-62 243.0 168 66.1
ECA232G0121 Erigeron canadensis HOM05D006866 ORTHO05D008689 2.3e-60 237.7 184 58.7
Phvul.007G021100 Phaseolus vulgaris HOM05D006866 ORTHO05D008689 6.7e-60 236.1 168 63.7
Migut.M01983 Erythranthe guttata HOM05D006866 ORTHO05D008689 1.5e-59 235.0 195 59.0
TPR.G2448 Trifolium pratense HOM05D006866 ORTHO05D008689 2.0e-59 234.6 216 53.2
Sabra12G0093000 Salix brachista HOM05D000009 ORTHO05D000008 3.1e-57 227.3 191 57.6
ATR0763G194 Amborella trichopoda HOM05D006866 ORTHO05D008689 2.0e-56 224.6 155 66.5
CARHR129270 Cardamine hirsuta HOM05D006866 ORTHO05D008689 3.5e-56 223.8 136 72.1
Nitab4.5_0007533g0010 Nicotiana tabacum HOM05D006866 ORTHO05D008689 1.3e-55 221.9 165 63.6
PSO675G2302 Papaver somniferum HOM05D006866 ORTHO05D008689 1.3e-55 221.9 195 53.3
CDE01G0264 Ceratophyllum demersum HOM05D006866 ORTHO05D008689 2.5e-54 217.6 185 59.5
PSO541G3299 Papaver somniferum HOM05D006866 ORTHO05D008689 5.5e-54 216.5 161 59.6
Cpa.g.sc135.7 Carica papaya HOM05D006866 ORTHO05D008689 8.0e-53 212.6 129 72.9
EL10Ac8g19312 Beta vulgaris HOM05D006866 ORTHO05D008689 1.4e-52 211.8 184 52.7
Lsat_1_v5_gn_8_117320 Lactuca sativa HOM05D006866 ORTHO05D008689 5.2e-52 209.9 134 70.1
Zm00001eb233080 Zea mays HOM05D006866 ORTHO05D008689 8.8e-52 209.1 176 55.7
arahy.Tifrunner.gnm1.ann1.0F554D Arachis hypogaea HOM05D006866 ORTHO05D008689 4.4e-51 206.8 187 55.1
AUR62000579 Chenopodium quinoa HOM05D006866 ORTHO05D008689 3.7e-50 203.8 186 53.8
Lj2A350T60 Lonicera japonica HOM05D006866 ORTHO05D008689 2.0e-48 198.0 205 50.7
PGR004G0545 Punica granatum HOM05D006866 ORTHO05D008689 3.3e-38 164.1 162 50.6
HanXRQChr10g0279011 Helianthus annuus HOM05D006866 ORTHO05D008689 1.2e-35 155.6 127 57.5
Sabra12G0092900 Salix brachista HOM05D000009 ORTHO05D000008 3.9e-31 140.6 130 52.3
Lsat_1_v5_gn_6_52341 Lactuca sativa HOM05D006866 ORTHO05D008689 1.5e-30 138.7 108 61.1
Os02g0170000 Oryza sativa ssp. japonica HOM05D006866 ORTHO05D008689 2.5e-30 137.9 105 60.0
Haze_06053 Corylus avellana HOM05D006866 ORTHO05D008689 1.5e-27 128.6 207 43.0
Manes.13G080558 Manihot esculenta HOM05D006866 ORTHO05D008689 2.6e-27 127.9 74 75.7
Cfa008015 Carpinus fangiana HOM05D000082 ORTHO05D008689 4.9e-26 123.6 112 58.9
SMO165G0132 Selaginella moellendorffii HOM05D006866 ORTHO05D008689 1.5e-22 112.1 130 39.2
AagrBONN_evm.TU.Sc2ySwM_368.1444 Anthoceros agrestis HOM05D006866 ORTHO05D008689 2.1e-21 108.2 128 39.1
Mapoly0002s0014 Marchantia polymorpha HOM05D006866 ORTHO05D008689 3.1e-20 104.4 137 35.8
Pp3c6_26210 Physcomitrium patens HOM05D006866 ORTHO05D008689 1.3e-18 99.0 125 36.8
RhsimUnG0235100 Rhododendron simsii HOM05D006866 ORTHO05D008689 1.1e-17 95.9 54 75.9
Pp3c16_5890 Physcomitrium patens HOM05D006866 ORTHO05D008689 9.2e-17 92.8 131 35.1
CSS0019706 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 2.1e-16 91.7 53 73.6
Lsat_1_v5_gn_3_50301 Lactuca sativa HOM05D006866 ORTHO05D008689 3.0e-15 87.8 55 70.9
CAN.G27.8 Capsicum annuum HOM05D006866 ORTHO05D008689 1.5e-14 85.5 70 55.7
Lsat_1_v5_gn_8_128381 Lactuca sativa HOM05D006866 ORTHO05D008689 1.5e-11 75.5 53 64.2
Haze_06062 Corylus avellana HOM05D006866 ORTHO05D008689 1.3e-10 72.4 39 94.9
CARHR141110 Cardamine hirsuta HOM05D006866 ORTHO05D008689 1.9e-09 68.6 45 64.4
Ciclev10015335m.g Citrus clementina HOM05D006866 ORTHO05D008689 3.5e-08 64.3 37 75.7
CAN.G1114.2 Capsicum annuum HOM05D006866 ORTHO05D008689 1.3e-07 62.4 41 65.9
CARHR180830 Cardamine hirsuta HOM05D006866 ORTHO05D008689 1.7e-07 62.0 42 64.3
CSS0001056 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 2.3e-07 61.6 37 73.0
CSS0048441 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 2.3e-07 61.6 37 73.0


User provided reference genes

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