Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 2.4e-173 612.5 402 100.0
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 4.9e-94 349.0 300 64.0
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 9.3e-93 344.7 319 64.6
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 1.2e-92 344.4 366 63.7
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 1.6e-92 344.0 342 60.8
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 4.6e-92 342.4 266 65.8
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 2.3e-91 340.1 284 65.5
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 3.0e-91 339.7 284 66.2
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 3.0e-91 339.7 293 64.2
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 5.1e-91 339.0 322 63.0
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 8.7e-91 338.2 355 61.4
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 1.9e-90 337.0 293 64.5
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 4.3e-90 335.9 289 63.3
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 4.3e-90 335.9 315 65.1
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 7.4e-90 335.1 285 66.3
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 7.4e-90 335.1 265 65.7
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 9.6e-90 334.7 265 65.7
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 2.8e-89 333.2 279 64.9
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 1.4e-88 330.9 319 59.9
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 1.8e-88 330.5 292 63.4
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 3.1e-88 329.7 265 63.8
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 6.9e-88 328.6 286 64.3
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 1.2e-87 327.8 266 66.2
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 2.6e-87 326.6 232 68.1
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 1.0e-86 324.7 294 60.2
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 1.0e-86 324.7 275 67.3
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 1.3e-86 324.3 329 60.5
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 8.4e-86 321.6 232 69.8
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 5.5e-85 318.9 243 69.1
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 7.1e-85 318.5 343 57.1
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 1.2e-84 317.8 281 69.8
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 1.6e-84 317.4 266 64.7
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 2.7e-84 316.6 253 68.0
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 4.6e-84 315.8 329 56.8
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 6.0e-84 315.5 286 59.8
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 7.9e-84 315.1 279 62.0
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 1.0e-83 314.7 329 61.1
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 1.3e-83 314.3 259 64.1
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 2.3e-83 313.5 281 61.9
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 3.0e-83 313.2 243 67.5
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 8.7e-83 311.6 242 69.0
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 1.5e-82 310.8 250 68.0
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 1.5e-82 310.8 276 65.2
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 1.9e-82 310.5 270 67.4
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 3.3e-82 309.7 321 59.2
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 5.7e-82 308.9 321 60.7
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 9.6e-82 308.1 308 57.1
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 9.6e-82 308.1 241 67.6
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 1.6e-81 307.4 309 57.3
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 2.8e-81 306.6 343 58.0
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 4.8e-81 305.8 299 58.9
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 8.2e-81 305.1 279 65.2
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 1.1e-80 304.7 257 64.6
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 9.0e-80 301.6 282 58.9
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 2.0e-79 300.4 333 56.2
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 2.0e-79 300.4 327 55.0
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 4.5e-79 299.3 278 64.0
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 2.9e-78 296.6 321 57.6
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 2.9e-78 296.6 321 57.3
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 3.8e-78 296.2 298 60.7
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 3.8e-78 296.2 333 56.2
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 1.9e-77 293.9 288 56.6
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 3.2e-77 293.1 345 53.3
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 3.2e-77 293.1 298 56.4
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 5.5e-77 292.4 327 52.0
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 9.3e-77 291.6 262 62.2
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 2.1e-76 290.4 256 65.6
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 6.1e-76 288.9 314 51.3
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 1.3e-75 287.7 256 68.8
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 1.8e-75 287.3 255 67.8
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 3.0e-75 286.6 223 66.8
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 3.9e-75 286.2 320 56.9
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 7.4e-74 282.0 219 69.9
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 7.9e-68 261.9 241 59.8
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 1.4e-67 261.2 223 63.2
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 5.1e-67 259.2 234 62.0
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 4.4e-66 256.1 195 72.8
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 1.7e-62 244.2 155 80.6
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 1.7e-62 244.2 195 70.3
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 3.8e-62 243.0 239 52.7
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 5.0e-62 242.7 242 56.2
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 8.5e-62 241.9 247 55.1
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 6.1e-60 235.7 209 60.8
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 1.7e-57 227.6 215 62.8
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 5.9e-55 219.2 162 73.5
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 8.0e-52 208.8 162 65.4
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 3.7e-49 199.9 195 61.0
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 9.1e-40 168.7 179 52.5
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 5.5e-37 159.5 130 63.8
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 1.0e-27 128.6 233 33.0
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 4.4e-26 123.2 74 86.5
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 4.4e-26 123.2 79 81.0
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 8.6e-22 109.0 155 39.4
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.7e-14 84.7 115 52.2


User provided reference genes

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