Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 8.6e-168 593.6 302 100.0
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 2.0e-140 502.7 300 82.7
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 1.0e-139 500.4 304 82.9
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 1.3e-139 500.0 301 82.4
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 2.9e-139 498.8 301 82.4
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 2.9e-139 498.8 301 82.4
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 1.9e-138 496.1 300 83.0
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 2.5e-138 495.7 301 81.1
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 4.2e-138 495.0 301 82.7
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 5.5e-138 494.6 301 82.1
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 7.1e-138 494.2 301 81.4
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 2.1e-137 492.7 301 80.7
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 4.6e-137 491.5 301 80.7
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 6.0e-137 491.1 301 80.7
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 6.0e-137 491.1 301 80.7
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 7.9e-137 490.7 301 80.4
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 1.0e-136 490.3 301 80.4
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 1.3e-136 490.0 301 81.7
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 1.8e-136 489.6 301 80.1
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 2.3e-136 489.2 301 80.7
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 2.3e-136 489.2 301 80.7
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 2.3e-136 489.2 301 80.7
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 3.9e-136 488.4 299 80.3
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 6.7e-136 487.6 299 79.9
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 8.7e-136 487.3 301 79.7
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 8.7e-136 487.3 301 80.4
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 1.9e-135 486.1 300 81.0
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 1.9e-135 486.1 301 79.7
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 2.5e-135 485.7 301 81.1
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 3.3e-135 485.3 300 79.7
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 5.7e-135 484.6 301 80.4
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 5.7e-135 484.6 301 80.4
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 5.7e-135 484.6 301 80.1
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 5.7e-135 484.6 301 80.1
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 1.3e-134 483.4 301 78.4
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 1.6e-134 483.0 300 79.3
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 1.6e-134 483.0 301 79.4
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 1.1e-133 480.3 301 80.1
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 1.4e-133 479.9 301 78.1
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 4.1e-133 478.4 300 78.3
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 6.9e-133 477.6 301 78.7
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 2.0e-132 476.1 299 79.6
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 2.0e-132 476.1 301 78.4
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 7.6e-132 474.2 300 78.7
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 5.0e-131 471.5 301 77.4
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 6.5e-131 471.1 299 78.9
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 1.1e-130 470.3 299 78.9
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.1e-130 470.3 299 78.6
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 1.9e-130 469.5 302 77.5
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 2.5e-130 469.2 301 77.1
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 3.2e-130 468.8 301 77.4
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 5.5e-130 468.0 299 77.9
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 1.2e-129 466.8 302 76.2
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 1.2e-129 466.8 302 76.8
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 2.7e-129 465.7 301 76.4
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 2.7e-129 465.7 292 77.4
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 6.1e-129 464.5 299 77.3
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 2.3e-128 462.6 301 77.7
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 6.7e-128 461.1 303 77.2
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 1.5e-127 459.9 300 74.7
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 8.2e-126 454.1 303 74.6
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 5.3e-125 451.4 300 76.0
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 1.5e-124 449.9 293 77.5
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 1.0e-123 447.2 303 74.3
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 1.3e-123 446.8 311 72.7
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 1.3e-123 446.8 300 75.7
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 2.9e-123 445.7 300 75.3
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 6.5e-123 444.5 303 74.9
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 1.4e-122 443.4 300 73.7
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 2.5e-122 442.6 300 75.0
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 2.5e-122 442.6 300 75.0
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 3.2e-122 442.2 300 75.0
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 9.4e-122 440.7 304 72.7
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 1.6e-121 439.9 300 75.0
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 2.1e-121 439.5 300 75.3
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 2.7e-121 439.1 300 74.0
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 2.7e-121 439.1 300 74.3
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 2.7e-121 439.1 302 72.2
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 6.1e-121 438.0 304 74.7
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 1.4e-120 436.8 300 74.3
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 1.4e-120 436.8 304 74.3
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 1.8e-120 436.4 300 73.7
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 3.0e-120 435.6 300 74.3
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 3.0e-120 435.6 300 72.3
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 3.0e-120 435.6 301 72.4
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 6.7e-120 434.5 300 72.3
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 1.1e-119 433.7 303 75.6
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 1.5e-119 433.3 300 72.7
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 3.3e-119 432.2 287 74.9
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 4.8e-118 428.3 300 72.0
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 4.8e-118 428.3 300 72.0
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 4.8e-118 428.3 300 72.0
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 3.1e-117 425.6 304 71.1
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 3.1e-117 425.6 300 71.3
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 2.9e-115 419.1 275 77.1
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 1.8e-112 409.8 249 80.3
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 2.3e-112 409.5 249 80.7
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 2.0e-103 379.8 300 64.3
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 9.7e-103 377.5 299 64.5
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 1.4e-101 373.6 230 80.0
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 7.0e-101 371.3 227 79.7
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 9.1e-101 370.9 275 70.2
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 7.2e-98 361.3 305 61.3
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 4.7e-97 358.6 248 71.4
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 3.0e-96 355.9 218 78.0
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 8.8e-96 354.4 235 74.5
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 5.7e-95 351.7 213 79.3
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 5.7e-95 351.7 222 75.7
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 7.0e-93 344.7 219 79.5
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 2.7e-92 342.8 254 66.9
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 8.3e-86 321.2 301 60.1
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 7.0e-85 318.2 277 57.8
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 8.6e-75 284.6 339 47.8
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 3.2e-69 266.2 173 71.7
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 9.9e-55 218.0 316 40.8
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 1.1e-50 204.5 141 75.9
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 5.6e-50 202.2 163 63.2
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 6.2e-41 172.2 343 35.0
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 1.1e-40 171.4 301 38.9
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 1.6e-36 157.5 177 48.0
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 3.9e-35 152.9 105 72.4
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 2.2e-30 137.1 89 74.2
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 2.2e-30 137.1 88 70.5
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 4.6e-28 129.4 91 72.5
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 1.4e-24 117.9 86 72.1
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 6.9e-24 115.5 139 49.6
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 3.8e-22 109.8 72 66.7
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 1.4e-21 107.8 315 30.2
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 1.4e-16 91.3 64 75.0
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 1.3e-14 84.7 60 60.0
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 1.4e-13 81.3 44 84.1


User provided reference genes

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