Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc11_g06410 Coffea canephora HOM05D003836 ORTHO05D004556 0.0e+00 1221.8 627 100.0
Migut.E00502 Erythranthe guttata HOM05D003836 ORTHO05D004556 1.3e-194 683.7 639 62.1
Ciclev10014689m.g Citrus clementina HOM05D003836 ORTHO05D004556 5.0e-186 655.2 508 67.7
Dinv02294 Davidia involucrata HOM05D003836 ORTHO05D004556 8.0e-184 647.9 446 74.9
Lsat_1_v5_gn_3_104360 Lactuca sativa HOM05D003836 ORTHO05D004556 1.2e-182 644.0 646 58.0
Manes.15G136900 Manihot esculenta HOM05D003836 ORTHO05D004556 3.4e-182 642.5 637 58.2
GSVIVG01011621001 Vitis vinifera HOM05D003836 ORTHO05D004556 1.3e-181 640.6 646 57.3
Glyma.04G189300 Glycine max HOM05D003836 ORTHO05D004556 1.4e-180 637.1 481 68.2
VMungo1309G0617 Vigna mungo HOM05D003836 ORTHO05D004556 1.4e-180 637.1 463 70.2
Gohir.A13G027900 Gossypium hirsutum HOM05D003836 ORTHO05D004556 3.5e-179 632.5 554 62.8
RcHm_v2.0_Chr4g0442391 Rosa chinensis HOM05D003836 ORTHO05D004556 7.8e-179 631.3 643 56.5
Cfa015051 Carpinus fangiana HOM05D003836 ORTHO05D004556 1.0e-178 630.9 657 55.1
Lalb_Chr11g0070001 Lupinus albus HOM05D003836 ORTHO05D004556 1.0e-178 630.9 657 55.4
Atru.chr7.2694 Acer truncatum HOM05D003836 ORTHO05D004556 1.3e-178 630.6 631 57.5
Phvul.009G172600 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 8.6e-178 627.9 598 58.7
CiPaw.05G187900 Carya illinoinensis HOM05D003836 ORTHO05D004556 4.3e-177 625.5 660 55.3
TAR374G0617 Trochodendron aralioides HOM05D003836 ORTHO05D004556 7.3e-177 624.8 662 55.3
Lj1g0024673 Lotus japonicus HOM05D003836 ORTHO05D004556 9.5e-177 624.4 509 64.8
Manes.17G086000 Manihot esculenta HOM05D003836 ORTHO05D004556 9.5e-177 624.4 638 57.7
Glyma.06G176300 Glycine max HOM05D003836 ORTHO05D004556 1.2e-176 624.0 657 55.1
FAN17G2261 Fragaria x ananassa HOM05D003836 ORTHO05D004556 1.6e-176 623.6 509 65.2
FvH4_4g33240 Fragaria vesca HOM05D003836 ORTHO05D004556 8.0e-176 621.3 509 65.2
Gorai.013G030000 Gossypium raimondii HOM05D003836 ORTHO05D004556 8.0e-176 621.3 632 58.2
QL03p038287 Quercus lobata HOM05D003836 ORTHO05D004556 2.3e-175 619.8 694 53.7
PGR142G3191 Punica granatum HOM05D003836 ORTHO05D004556 3.1e-175 619.4 657 57.1
FAN07G2679 Fragaria x ananassa HOM05D003836 ORTHO05D004556 1.5e-174 617.1 509 65.2
FAN22G0514 Fragaria x ananassa HOM05D003836 ORTHO05D004556 4.4e-174 615.5 636 55.7
TPR.G35600 Trifolium pratense HOM05D003836 ORTHO05D004556 9.8e-174 614.4 523 63.7
Medtr3g076570 Medicago truncatula HOM05D003836 ORTHO05D004556 1.3e-173 614.0 655 55.0
FAN12G1258 Fragaria x ananassa HOM05D003836 ORTHO05D004556 2.2e-173 613.2 478 67.6
Gorai.008G170400 Gossypium raimondii HOM05D003836 ORTHO05D004556 3.7e-173 612.5 637 56.4
MD16G1015700 Malus domestica HOM05D003836 ORTHO05D004556 1.9e-172 610.1 652 55.5
Aqoxy6G01037 Aquilegia oxysepala HOM05D003836 ORTHO05D004556 2.4e-172 609.8 461 69.2
TAR622G1236 Trochodendron aralioides HOM05D003836 ORTHO05D004556 3.2e-172 609.4 655 55.4
Ca_16122_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 5.4e-172 608.6 666 55.4
Potri.010G103400 Populus trichocarpa HOM05D003836 ORTHO05D004556 7.0e-172 608.2 533 63.6
TWI74G0623 Tripterygium wilfordii HOM05D003836 ORTHO05D004556 9.2e-172 607.8 642 55.1
arahy.Tifrunner.gnm1.ann1.THT645 Arachis hypogaea HOM05D003836 ORTHO05D004556 1.6e-171 607.1 504 64.1
CANSAT78G2203 Cannabis sativa HOM05D003836 ORTHO05D004556 2.5e-169 599.7 479 66.2
Gohir.D13G026700 Gossypium hirsutum HOM05D003836 ORTHO05D004556 4.3e-169 599.0 510 64.5
Hma1.2p1_2859F.1_g329510 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 4.3e-169 599.0 411 72.7
Nn4g24475 Nelumbo nucifera HOM05D003836 ORTHO05D004556 3.6e-168 595.9 674 54.3
Haze_10840 Corylus avellana HOM05D003836 ORTHO05D004556 4.7e-168 595.5 665 53.4
PSO063G7099 Papaver somniferum HOM05D003836 ORTHO05D004556 8.1e-168 594.7 453 68.4
arahy.Tifrunner.gnm1.ann1.FHB42U Arachis hypogaea HOM05D003836 ORTHO05D004556 1.4e-167 594.0 657 53.6
Prupe.1G335900 Prunus persica HOM05D003836 ORTHO05D004556 4.0e-167 592.4 649 54.9
CsaV3_7G022080 Cucumis sativus L. HOM05D003836 ORTHO05D004556 1.5e-166 590.5 669 53.2
ClCG11G007570 Citrullus lanatus HOM05D003836 ORTHO05D004556 2.0e-166 590.1 657 53.1
DCAR_023556 Daucus carota HOM05D003836 ORTHO05D004556 3.4e-166 589.3 633 54.0
Nn3g18432 Nelumbo nucifera HOM05D003836 ORTHO05D004556 3.4e-166 589.3 657 53.4
Psat5g116920 Pisum sativum HOM05D003836 ORTHO05D004556 7.5e-166 588.2 482 63.9
Dinv32673 Davidia involucrata HOM05D003836 ORTHO05D004556 2.2e-165 586.6 655 54.2
SalBow2G2298 Salvia bowleyana HOM05D003836 ORTHO05D004556 2.2e-165 586.6 658 54.0
ECA246G1487 Erigeron canadensis HOM05D003836 ORTHO05D004556 1.1e-164 584.3 639 54.0
Atru.chr11.806 Acer truncatum HOM05D003836 ORTHO05D004556 4.1e-164 582.4 405 72.8
PSO782G5172 Papaver somniferum HOM05D003836 ORTHO05D004556 5.4e-164 582.0 532 60.0
Eucgr.G02079 Eucalyptus grandis HOM05D003836 ORTHO05D004556 3.5e-163 579.3 649 54.2
Sabra10G0076000 Salix brachista HOM05D003836 ORTHO05D004556 6.6e-162 575.1 533 60.4
arahy.Tifrunner.gnm1.ann1.HCE13Z Arachis hypogaea HOM05D003836 ORTHO05D004556 1.5e-161 573.9 644 53.6
Sed0017171 Sechium edule HOM05D003836 ORTHO05D004556 1.5e-161 573.9 670 51.9
AT1G67960 Arabidopsis thaliana HOM05D003836 ORTHO05D004556 2.8e-160 569.7 641 53.0
SGA_v2.0_scaffold23G10153 Striga asiatica HOM05D003836 ORTHO05D004556 3.1e-159 566.2 623 55.2
AL2G26960 Arabidopsis lyrata HOM05D003836 ORTHO05D004556 6.8e-159 565.1 644 52.5
Thecc.02G307000 Theobroma cacao HOM05D003836 ORTHO05D004556 2.2e-157 560.1 644 53.9
CARHR060610 Cardamine hirsuta HOM05D003836 ORTHO05D004556 7.1e-156 555.1 653 51.1
Duzib251G0897 Durio zibethinus HOM05D003836 ORTHO05D004556 9.2e-156 554.7 507 62.1
MELO3C013236.2 Cucumis melo HOM05D003836 ORTHO05D004556 2.1e-155 553.5 647 51.6
Ah.02g131240 Amaranthus hybridus HOM05D003836 ORTHO05D004556 6.0e-155 552.0 426 67.4
Carub.0002s1445 Capsella rubella HOM05D003836 ORTHO05D004556 1.3e-154 550.8 645 50.4
COL.COLO4_27608 Corchorus olitorius HOM05D003836 ORTHO05D004556 3.9e-154 549.3 578 56.6
EL10Ac8g19453 Beta vulgaris HOM05D003836 ORTHO05D004556 1.2e-152 544.3 502 60.0
Sp5g22940 Schrenkiella parvula HOM05D003836 ORTHO05D004556 1.8e-151 540.4 649 50.1
Glyma.07G191900 Glycine max HOM05D003836 ORTHO05D004556 3.1e-151 539.7 440 64.3
Gohir.A12G154400 Gossypium hirsutum HOM05D003836 ORTHO05D004556 1.2e-150 537.7 570 56.1
Duzib268G0198 Durio zibethinus HOM05D003836 ORTHO05D004556 7.6e-150 535.0 640 53.0
Thhalv10018303m.g Eutrema salsugineum HOM05D003836 ORTHO05D004556 9.9e-150 534.6 647 50.7
ATR0021G013 Amborella trichopoda HOM05D003836 ORTHO05D004556 6.4e-149 531.9 666 48.8
Gohir.D12G157600 Gossypium hirsutum HOM05D003836 ORTHO05D004556 7.8e-147 525.0 570 54.9
Zm00001eb216180 Zea mays HOM05D003836 ORTHO05D004556 1.3e-146 524.2 636 50.5
A07p34480 Brassica napus HOM05D003836 ORTHO05D004556 3.0e-146 523.1 622 49.5
Cpa.g.sc2.157 Carica papaya HOM05D003836 ORTHO05D004556 4.3e-145 519.2 594 52.4
Aa31sc536G20 Aethionema arabicum HOM05D003836 ORTHO05D004556 6.2e-144 515.4 680 47.8
unitig_8.g4015 Utricularia gibba HOM05D003836 ORTHO05D004556 8.1e-144 515.0 629 50.7
TPR.G32436 Trifolium pratense HOM05D003836 ORTHO05D004556 2.6e-142 510.0 427 61.4
Glyma.13G184600 Glycine max HOM05D003836 ORTHO05D004556 3.4e-142 509.6 464 60.1
BcaB03g15387 Brassica carinata HOM05D003836 ORTHO05D004556 9.9e-142 508.1 630 48.1
VMungo0251G2034 Vigna mungo HOM05D003836 ORTHO05D004556 4.5e-134 482.6 420 60.7
Psat7g111040 Pisum sativum HOM05D003836 ORTHO05D004556 1.1e-129 468.0 373 64.1
arahy.Tifrunner.gnm1.ann1.36Q8NS Arachis hypogaea HOM05D003836 ORTHO05D004556 9.6e-129 464.9 650 45.4
Lj6A734G74 Lonicera japonica HOM05D003836 ORTHO05D004556 4.0e-127 459.5 461 56.0
BolC6t39223H Brassica oleracea HOM05D003836 ORTHO05D004556 9.0e-127 458.4 605 47.3
Os03g0715400 Oryza sativa ssp. japonica HOM05D003836 ORTHO05D004556 1.7e-125 454.1 544 51.5
Medtr4g090465 Medicago truncatula HOM05D003836 ORTHO05D004556 2.5e-124 450.3 418 58.1
BcaC08g46221 Brassica carinata HOM05D003836 ORTHO05D004556 4.6e-123 446.0 646 44.4
Nitab4.5_0001516g0010 Nicotiana tabacum HOM05D003836 ORTHO05D004556 5.1e-122 442.6 789 40.6
Pp3c12_1050 Physcomitrium patens HOM05D003836 ORTHO05D004556 1.1e-119 434.9 434 53.0
arahy.Tifrunner.gnm1.ann1.6NWB5V Arachis hypogaea HOM05D003836 ORTHO05D004556 6.5e-117 425.6 560 46.8
Phvul.002G223900 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 1.9e-116 424.1 437 54.7
Mapoly0019s0007 Marchantia polymorpha HOM05D003836 ORTHO05D004556 2.7e-115 420.2 424 51.2
Solyc06g051440.4 Solanum lycopersicum HOM05D003836 ORTHO05D004556 3.5e-115 419.9 298 72.1
Oeu036124.4 Olea europaea HOM05D003836 ORTHO05D004556 3.7e-112 409.8 322 68.9
SHI04351 Sapria himalayana HOM05D003836 ORTHO05D004556 1.7e-109 401.0 363 59.0
Lalb_Chr23g0273371 Lupinus albus HOM05D003836 ORTHO05D004556 1.2e-107 394.8 485 49.9
BcaB03g15147 Brassica carinata HOM05D003836 ORTHO05D004556 2.8e-104 383.6 598 43.1
C06p42030 Brassica napus HOM05D003836 ORTHO05D004556 6.1e-99 365.9 611 41.2
AUR62033051 Chenopodium quinoa HOM05D003836 ORTHO05D004556 1.5e-92 344.7 376 53.5
Sopen06g017410 Solanum pennellii HOM05D003836 ORTHO05D004556 1.6e-91 341.3 434 51.4
arahy.Tifrunner.gnm1.ann1.0AB4R7 Arachis hypogaea HOM05D003836 ORTHO05D004556 4.0e-90 336.7 562 41.8
HanXRQChr15g0473551 Helianthus annuus HOM05D003836 ORTHO05D004556 4.4e-89 333.2 320 59.1
AagrBONN_evm.TU.Sc2ySwM_228.1822 Anthoceros agrestis HOM05D003836 ORTHO05D004556 4.1e-87 326.6 351 49.3
Peaxi162Scf00825g00424 Petunia axillaris HOM05D003836 ORTHO05D004556 5.0e-85 319.7 402 50.7
MD13G1017500 Malus domestica HOM05D003836 ORTHO05D004556 1.0e-82 312.0 449 46.1
SMO358G0292 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 2.2e-80 304.3 492 38.4
MBI11_g36366_MAGBIO Magnolia biondii HOM05D003836 ORTHO05D004556 1.7e-77 294.7 244 62.3
Sc10g0004880 Simmondsia chinensis HOM05D003836 ORTHO05D004556 2.2e-77 294.3 195 73.3
Nitab4.5_0001227g0030 Nicotiana tabacum HOM05D003836 ORTHO05D004556 2.6e-73 280.8 654 35.8
Sc10g0004870 Simmondsia chinensis HOM05D003836 ORTHO05D004556 1.7e-72 278.1 237 61.6
CSS0006660 Camellia sinensis var. sinensis HOM05D003836 ORTHO05D004556 6.8e-66 256.1 165 74.5
DCAR_030293 Daucus carota HOM05D003836 ORTHO05D004556 2.6e-65 254.2 356 45.2
Lalb_Chr23g0273381 Lupinus albus HOM05D003836 ORTHO05D004556 2.7e-62 244.2 168 71.4
HanXRQChr15g0473541 Helianthus annuus HOM05D003836 ORTHO05D004556 1.7e-61 241.5 165 71.5
Peaxi162Scf00825g00423 Petunia axillaris HOM05D003836 ORTHO05D004556 1.1e-60 238.8 163 71.8
BcaC08g46015 Brassica carinata HOM05D003836 ORTHO05D004556 6.2e-59 233.0 187 65.2
AUR62042201 Chenopodium quinoa HOM05D003836 ORTHO05D004556 1.0e-53 215.7 440 39.1
C01p04020 Brassica napus HOM05D003836 ORTHO05D004556 6.6e-53 213.0 159 64.8
Hma1.2p1_1450F.1_g284160 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 4.0e-50 203.8 347 43.5
Gorai.013G150200 Gossypium raimondii HOM05D003836 ORTHO05D004556 2.2e-48 198.0 145 69.7
Nn8g39028 Nelumbo nucifera HOM05D003836 ORTHO05D004556 2.5e-44 184.5 140 66.4
arahy.Tifrunner.gnm1.ann1.I9RBIQ Arachis hypogaea HOM05D003836 ORTHO05D004556 2.1e-43 181.4 190 54.7
MD13G1017700 Malus domestica HOM05D003836 ORTHO05D004556 2.1e-43 181.4 124 70.2
Hma1.2p1_0658F.1_g197210 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 1.3e-40 172.2 332 40.7
MCO03G489 Micromonas commoda HOM05D003836 ORTHO05D004556 4.9e-40 170.2 391 30.7
PRCOL_00001721 Prasinoderma coloniale HOM05D003836 ORTHO05D004556 1.4e-39 168.7 391 32.2
Gohir.D13G133800 Gossypium hirsutum HOM05D003836 ORTHO05D004556 4.1e-39 167.2 145 61.4
Ca_18504_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 2.3e-37 161.4 162 56.8
Nn6g35150 Nelumbo nucifera HOM05D003836 ORTHO05D004556 2.3e-37 161.4 128 64.1
Nn6g35439 Nelumbo nucifera HOM05D003836 ORTHO05D004556 7.3e-36 156.4 139 60.4
CAN.G2032.2 Capsicum annuum HOM05D003836 ORTHO05D004556 3.6e-35 154.1 136 58.8
HPP92_020596 Vanilla planifolia HOM05D003836 ORTHO05D004556 4.0e-34 150.6 300 38.0
arahy.Tifrunner.gnm1.ann1.MA62LX Arachis hypogaea HOM05D003836 ORTHO05D004556 1.3e-27 129.0 87 75.9
C06p38100 Brassica napus HOM05D003836 ORTHO05D004556 6.2e-27 126.7 239 34.7
BolC6t38907H Brassica oleracea HOM05D003836 ORTHO05D004556 6.2e-27 126.7 239 34.7
Cre02.g091000 Chlamydomonas reinhardtii HOM05D003836 ORTHO05D004556 8.1e-27 126.3 328 28.0
RcHm_v2.0_Chr2g0114371 Rosa chinensis HOM05D003836 ORTHO05D004556 1.6e-22 112.1 67 82.1
Hund15725 Selenicereus undatus HOM05D003836 ORTHO05D004556 2.3e-21 108.2 264 34.5
arahy.Tifrunner.gnm1.ann1.2AK3X2 Arachis hypogaea HOM05D003836 ORTHO05D004556 2.5e-20 104.8 101 53.5
arahy.Tifrunner.gnm1.ann1.62N7D7 Arachis hypogaea HOM05D003836 ORTHO05D004556 2.5e-20 104.8 101 53.5
arahy.Tifrunner.gnm1.ann1.6IM5NS Arachis hypogaea HOM05D003836 ORTHO05D004556 2.5e-20 104.8 101 53.5
arahy.Tifrunner.gnm1.ann1.QY8RSF Arachis hypogaea HOM05D003836 ORTHO05D004556 2.5e-20 104.8 101 53.5
arahy.Tifrunner.gnm1.ann1.1LH17Q Arachis hypogaea HOM05D003836 ORTHO05D004556 2.1e-19 101.7 93 57.0
arahy.Tifrunner.gnm1.ann1.XXVP91 Arachis hypogaea HOM05D003836 ORTHO05D004556 1.1e-18 99.4 93 54.8
Cfa025144 Carpinus fangiana HOM05D003836 ORTHO05D004556 1.1e-18 99.4 291 31.3
Gohir.D06G130832 Gossypium hirsutum HOM05D005098 ORTHO05D004556 5.3e-18 97.1 110 57.3
Cpa.g.sc2.159 Carica papaya HOM05D003836 ORTHO05D004556 1.5e-17 95.5 69 68.1
arahy.Tifrunner.gnm1.ann1.ANFG2H Arachis hypogaea HOM05D003836 ORTHO05D004556 2.6e-17 94.7 91 57.1
Oeu043972.2 Olea europaea HOM05D003836 ORTHO05D004556 7.6e-17 93.2 164 37.8
TPR.G24606 Trifolium pratense HOM05D003836 ORTHO05D004556 6.4e-16 90.1 69 62.3
Gorai.010G152700 Gossypium raimondii HOM05D003836 ORTHO05D004556 1.2e-14 85.9 54 79.6
SMO278G0031 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 1.0e-13 82.8 93 48.4
Ca_18505_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 1.1e-12 79.3 49 73.5
arahy.Tifrunner.gnm1.ann1.UYUS3H Arachis hypogaea HOM05D003836 ORTHO05D019773 4.3e-12 77.4 65 61.5
SHI04354 Sapria himalayana HOM05D003836 ORTHO05D004556 5.6e-12 77.0 56 64.3
Nn6g35438 Nelumbo nucifera HOM05D003836 ORTHO05D004556 9.6e-12 76.3 44 86.4
SEGI_35804 Sequoiadendron giganteum HOM05D003836 ORTHO05D004556 2.1e-11 75.1 111 38.7
SMO200G0209 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 2.8e-11 74.7 81 48.1
Zm00001eb237940 Zea mays HOM05D003836 ORTHO05D004556 3.7e-11 74.3 46 67.4
Zm00001eb410650 Zea mays HOM05D003836 ORTHO05D004556 3.7e-11 74.3 46 67.4
Zm00001eb175210 Zea mays HOM05D003836 ORTHO05D004556 1.1e-10 72.8 46 65.2
arahy.Tifrunner.gnm1.ann1.45U5GW Arachis hypogaea HOM05D003836 ORTHO05D011406 2.4e-10 71.6 64 57.8
arahy.Tifrunner.gnm1.ann1.JZ224H Arachis hypogaea HOM05D022818 ORTHO05D000304 4.2e-07 60.8 40 72.5
RcHm_v2.0_Chr4g0390701 Rosa chinensis HOM05D003836 ORTHO05D004556 4.2e-07 60.8 39 69.2
arahy.Tifrunner.gnm1.ann1.70DEUR Arachis hypogaea HOM05D000602 ORTHO05D004556 1.6e-06 58.9 36 69.4
RcHm_v2.0_Chr6g0287871 Rosa chinensis HOM05D003836 ORTHO05D004556 2.7e-06 58.2 39 76.9
CAN.G17.4 Capsicum annuum HOM05D003836 ORTHO05D004556 3.5e-06 57.8 238 32.4


User provided reference genes

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