Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 1.8e-204 715.7 354 100.0
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 2.5e-158 562.4 354 76.0
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 3.3e-158 562.0 382 71.5
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 4.3e-158 561.6 355 76.1
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 2.1e-157 559.3 354 75.7
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 6.8e-156 554.3 354 74.9
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 6.8e-156 554.3 354 74.3
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 9.8e-155 550.4 354 74.3
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 2.2e-154 549.3 354 74.3
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 3.2e-153 545.4 354 73.4
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 3.5e-152 542.0 377 69.8
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 7.3e-150 534.3 356 72.8
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 6.2e-149 531.2 355 71.8
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 8.1e-149 530.8 350 73.4
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 1.1e-148 530.4 355 73.0
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 1.8e-148 529.6 355 71.8
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 3.1e-148 528.9 355 71.8
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 1.2e-147 526.9 355 71.8
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 1.2e-147 526.9 354 71.8
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 3.4e-147 525.4 355 71.5
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 4.4e-147 525.0 355 71.0
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 9.9e-147 523.9 355 70.4
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 2.2e-146 522.7 355 69.9
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 1.4e-145 520.0 355 71.3
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 3.5e-144 515.4 356 71.6
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 7.8e-144 514.2 373 68.9
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 1.0e-143 513.8 358 68.7
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 2.3e-143 512.7 355 70.1
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 3.0e-143 512.3 357 70.0
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 3.9e-143 511.9 355 70.1
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 5.1e-143 511.5 356 69.7
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 5.1e-143 511.5 356 70.2
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 8.6e-143 510.8 358 67.0
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 8.6e-143 510.8 357 70.0
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 1.1e-142 510.4 357 69.7
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 1.9e-142 509.6 356 69.9
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 4.3e-142 508.4 358 67.6
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 5.6e-142 508.1 357 70.0
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 1.6e-141 506.5 354 69.8
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 2.1e-141 506.1 355 69.0
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 3.6e-141 505.4 356 69.1
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 3.6e-141 505.4 386 65.5
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 4.7e-141 505.0 356 68.5
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 1.8e-140 503.1 355 68.2
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 2.4e-140 502.7 356 66.9
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 2.4e-140 502.7 354 68.9
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 2.4e-140 502.7 358 68.2
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 2.0e-139 499.6 356 68.8
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 2.6e-139 499.2 354 67.8
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 4.4e-139 498.4 354 68.1
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 4.4e-139 498.4 354 68.1
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 1.7e-138 496.5 354 66.1
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 3.8e-138 495.4 354 68.1
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 1.4e-137 493.4 356 67.4
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 1.9e-137 493.0 354 65.5
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 3.2e-137 492.3 355 68.2
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 9.2e-137 490.7 355 68.2
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 2.7e-136 489.2 357 68.1
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 2.7e-136 489.2 357 68.1
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 4.6e-136 488.4 355 67.9
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.3e-135 486.9 354 66.9
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 3.9e-135 485.3 354 66.9
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 1.5e-134 483.4 358 65.1
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 1.9e-134 483.0 327 72.8
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 2.5e-134 482.6 354 66.1
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 4.3e-134 481.9 354 66.1
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 7.3e-134 481.1 355 67.0
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 9.6e-134 480.7 355 67.6
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 1.6e-133 479.9 355 65.6
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 2.1e-133 479.6 402 59.2
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 2.8e-133 479.2 357 66.4
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 4.7e-133 478.4 355 66.5
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 8.1e-133 477.6 355 67.0
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 2.4e-132 476.1 355 64.8
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 6.9e-132 474.6 357 65.5
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 6.9e-132 474.6 354 65.3
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 1.5e-131 473.4 355 65.4
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 2.0e-131 473.0 358 65.9
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 2.0e-131 473.0 355 65.6
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 2.0e-131 473.0 367 63.8
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 2.6e-131 472.6 355 64.5
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 4.4e-131 471.9 358 65.1
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 5.8e-131 471.5 358 65.1
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 5.8e-131 471.5 358 65.1
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 1.3e-130 470.3 358 65.1
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 1.7e-130 469.9 358 64.2
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 1.7e-130 469.9 354 65.8
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 2.9e-130 469.2 367 62.7
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 3.8e-130 468.8 354 65.5
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 4.9e-130 468.4 358 64.0
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 4.9e-130 468.4 326 69.3
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 1.4e-129 466.8 358 64.2
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 2.4e-129 466.1 358 64.2
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 2.4e-129 466.1 354 65.0
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 7.1e-129 464.5 354 63.6
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 9.3e-129 464.2 354 65.0
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 2.1e-128 463.0 354 64.7
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 2.7e-128 462.6 358 64.2
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 3.5e-128 462.2 358 65.6
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 1.0e-127 460.7 358 65.4
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 3.0e-127 459.1 358 62.0
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 1.5e-123 446.8 354 61.0
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 3.0e-119 432.6 353 60.6
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 1.5e-118 430.3 357 59.9
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 1.4e-116 423.7 365 56.4
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 3.2e-113 412.5 357 56.3
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 1.5e-110 403.7 347 58.2
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 7.6e-107 391.3 360 56.9
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 3.8e-106 389.0 359 54.0
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 4.9e-106 388.7 358 53.9
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 1.3e-103 380.6 356 58.7
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 1.0e-95 354.4 362 48.9
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 4.5e-91 339.0 224 72.3
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 5.9e-83 312.0 304 55.3
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 4.2e-81 305.8 198 73.2
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 2.7e-80 303.1 198 73.2
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 2.6e-75 286.6 182 75.3
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 2.5e-73 280.0 179 74.3
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 1.7e-69 267.3 346 42.8
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 4.7e-64 249.2 291 47.1
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 3.8e-50 203.0 136 71.3
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 1.7e-42 177.6 170 52.4
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 7.8e-11 72.4 260 23.5


User provided reference genes

Program Settings