Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g12770 Coffea canephora HOM05D006616 ORTHO05D008435 1.9e-246 855.5 466 100.0
Dinv27270 Davidia involucrata HOM05D006616 ORTHO05D008435 4.2e-153 545.4 470 68.7
Hma1.2p1_2178F.1_g316210 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 1.9e-145 520.0 471 64.8
Oeu038315.2 Olea europaea HOM05D006616 ORTHO05D008435 7.6e-139 498.0 502 61.0
SGA_v2.0_scaffold25G11136 Striga asiatica HOM05D006616 ORTHO05D008435 2.2e-138 496.5 468 64.7
Actinidia03423 Actinidia chinensis HOM05D006616 ORTHO05D008435 2.7e-136 489.6 473 62.2
Rhsim11G0071400 Rhododendron simsii HOM05D006616 ORTHO05D008435 1.0e-135 487.6 478 63.0
MSTRG.24176 Avicennia marina HOM05D006616 ORTHO05D008435 5.1e-135 485.3 472 62.3
GSVIVG01025818001 Vitis vinifera HOM05D006616 ORTHO05D008435 2.8e-133 479.6 472 63.8
Prupe.7G020500 Prunus persica HOM05D006616 ORTHO05D008435 8.2e-133 478.0 484 61.8
SalBow2G2978 Salvia bowleyana HOM05D006616 ORTHO05D008435 2.6e-131 473.0 490 55.1
TAR622G0026 Trochodendron aralioides HOM05D006616 ORTHO05D008435 5.8e-131 471.9 470 62.3
Migut.N03264 Erythranthe guttata HOM05D006616 ORTHO05D008435 1.0e-130 471.1 470 61.9
CSS0027023 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 2.2e-130 469.9 472 62.5
CAN.G526.15 Capsicum annuum HOM05D006616 ORTHO05D008435 3.8e-130 469.2 474 61.0
Peaxi162Scf00066g00130 Petunia axillaris HOM05D006616 ORTHO05D008435 8.4e-130 468.0 468 63.0
Hund19065 Selenicereus undatus HOM05D006616 ORTHO05D008435 4.6e-128 462.2 463 61.6
Lj5g0015037 Lotus japonicus HOM05D006616 ORTHO05D008435 6.1e-128 461.8 456 61.4
VMungo0720G0485 Vigna mungo HOM05D006616 ORTHO05D008435 1.8e-127 460.3 454 62.8
Phvul.007G243700 Phaseolus vulgaris HOM05D006616 ORTHO05D008435 2.3e-127 459.9 449 63.5
ECA246G4188 Erigeron canadensis HOM05D006616 ORTHO05D008435 6.7e-127 458.4 473 59.8
RcHm_v2.0_Chr3g0494671 Rosa chinensis HOM05D006616 ORTHO05D008435 2.5e-126 456.4 463 61.3
MD00G1150000 Malus domestica HOM05D006616 ORTHO05D008435 3.3e-126 456.1 483 58.8
Atru.chr1.1509 Acer truncatum HOM05D006616 ORTHO05D008435 4.3e-126 455.7 486 59.7
Nn3g18184 Nelumbo nucifera HOM05D006616 ORTHO05D008435 1.6e-125 453.8 453 63.1
MBI16_g32949_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 2.2e-125 453.4 477 58.7
CANSAT78G0100 Cannabis sativa HOM05D006616 ORTHO05D008435 3.7e-125 452.6 477 59.7
Ca_02795_v3 Cicer arietinum L. HOM05D006616 ORTHO05D008435 3.7e-125 452.6 464 61.4
HanXRQChr05g0149371 Helianthus annuus HOM05D006616 ORTHO05D008435 3.7e-125 452.6 464 60.3
Aqoxy3G00148 Aquilegia oxysepala HOM05D006616 ORTHO05D008435 4.8e-125 452.2 471 60.9
TWI74G0800 Tripterygium wilfordii HOM05D006616 ORTHO05D008435 1.8e-124 450.3 462 61.7
arahy.Tifrunner.gnm1.ann1.QA0LD5 Arachis hypogaea HOM05D006616 ORTHO05D008435 2.4e-124 449.9 474 61.2
Lj7A350T24 Lonicera japonica HOM05D006616 ORTHO05D008435 2.4e-124 449.9 528 51.1
arahy.Tifrunner.gnm1.ann1.958W0C Arachis hypogaea HOM05D006616 ORTHO05D008435 1.2e-123 447.6 474 61.0
PGR042G1816 Punica granatum HOM05D006616 ORTHO05D008435 1.2e-123 447.6 466 60.1
Lalb_Chr21g0316821 Lupinus albus HOM05D006616 ORTHO05D008435 5.9e-123 445.3 459 61.4
Potri.006G032200 Populus trichocarpa HOM05D006616 ORTHO05D008435 2.9e-122 443.0 473 57.7
TPR.G13802 Trifolium pratense HOM05D006616 ORTHO05D008435 8.5e-122 441.4 456 61.0
Cfa019948 Carpinus fangiana HOM05D006616 ORTHO05D008435 1.1e-121 441.0 490 58.8
Duzib128G1745 Durio zibethinus HOM05D006616 ORTHO05D008435 1.9e-121 440.3 475 58.1
CiPaw.10G044000 Carya illinoinensis HOM05D006616 ORTHO05D008435 1.6e-120 437.2 509 57.4
FAN28G1824 Fragaria x ananassa HOM05D006616 ORTHO05D008435 3.6e-120 436.0 468 60.5
Ah.13g077310 Amaranthus hybridus HOM05D006616 ORTHO05D008435 1.4e-119 434.1 464 57.5
QL07p014063 Quercus lobata HOM05D006616 ORTHO05D008435 1.8e-119 433.7 524 53.8
Eucgr.A02183 Eucalyptus grandis HOM05D006616 ORTHO05D008435 2.3e-119 433.3 465 59.1
Thecc.05G123900 Theobroma cacao HOM05D006616 ORTHO05D008435 3.0e-119 433.0 483 58.2
ATR0326G030 Amborella trichopoda HOM05D006616 ORTHO05D008435 3.9e-119 432.6 481 57.8
Manes.09G002500 Manihot esculenta HOM05D006616 ORTHO05D008435 3.9e-119 432.6 460 59.8
CSS0040058 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 6.7e-119 431.8 469 59.1
FAN26G1972 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.1e-118 431.0 462 61.7
Medtr1g051155 Medicago truncatula HOM05D006616 ORTHO05D008435 1.1e-118 431.0 456 60.3
AUR62018417 Chenopodium quinoa HOM05D006616 ORTHO05D008435 2.2e-117 426.8 477 56.0
AUR62021025 Chenopodium quinoa HOM05D006616 ORTHO05D008435 2.2e-117 426.8 474 56.1
CsaV3_3G040470 Cucumis sativus L. HOM05D006616 ORTHO05D008435 4.8e-117 425.6 510 55.9
Glyma.02G162000 Glycine max HOM05D006616 ORTHO05D008435 8.2e-117 424.9 459 59.9
Sabra06G0021500 Salix brachista HOM05D006616 ORTHO05D008435 1.1e-116 424.5 473 56.7
Sed0024074 Sechium edule HOM05D006616 ORTHO05D008435 2.4e-116 423.3 502 55.4
CDE04G3611 Ceratophyllum demersum HOM05D006616 ORTHO05D008435 6.9e-116 421.8 462 58.4
Gohir.A11G305800 Gossypium hirsutum HOM05D006616 ORTHO05D008435 1.5e-115 420.6 463 58.1
Solyc11g005110.3 Solanum lycopersicum HOM05D006616 ORTHO05D008435 1.5e-115 420.6 467 58.5
Ciclev10011646m.g Citrus clementina HOM05D006616 ORTHO05D008435 2.6e-115 419.9 469 58.0
PSO478G1375 Papaver somniferum HOM05D006616 ORTHO05D008435 2.6e-115 419.9 473 58.4
Sopen11g001110 Solanum pennellii HOM05D006616 ORTHO05D008435 2.6e-115 419.9 467 58.5
Gorai.007G351400 Gossypium raimondii HOM05D006616 ORTHO05D008435 2.5e-113 413.3 464 58.0
Psat6g087360 Pisum sativum HOM05D006616 ORTHO05D008435 4.2e-113 412.5 459 58.0
THA.LOC104815412 Tarenaya hassleriana HOM05D006616 ORTHO05D008435 1.2e-112 411.0 474 58.0
Gohir.D11G321200 Gossypium hirsutum HOM05D006616 ORTHO05D008435 1.6e-112 410.6 462 58.2
FAN19G2668 Fragaria x ananassa HOM05D006616 ORTHO05D008435 2.7e-112 409.8 480 56.9
DCAR_014373 Daucus carota HOM05D006616 ORTHO05D008435 1.0e-111 407.9 484 55.8
EL10Ac3g07308 Beta vulgaris HOM05D006616 ORTHO05D008435 4.8e-109 399.1 472 54.2
Os01g0916300 Oryza sativa ssp. japonica HOM05D006616 ORTHO05D008435 2.6e-107 393.3 465 56.1
HPP92_023122 Vanilla planifolia HOM05D006616 ORTHO05D008435 2.6e-107 393.3 491 54.4
Aa31LG3G1010 Aethionema arabicum HOM05D006616 ORTHO05D008435 1.1e-105 387.9 465 54.2
Zm00001eb364810 Zea mays HOM05D006616 ORTHO05D008435 2.7e-104 383.3 469 55.0
unitig_52.g17546 Utricularia gibba HOM05D006616 ORTHO05D008435 5.2e-103 379.0 471 53.9
AL4G39000 Arabidopsis lyrata HOM05D006616 ORTHO05D008435 5.7e-102 375.6 478 54.4
AT2G41020 Arabidopsis thaliana HOM05D006616 ORTHO05D008435 4.1e-100 369.4 478 54.6
BcaC02g12875 Brassica carinata HOM05D006616 ORTHO05D008435 3.8e-98 362.8 457 54.5
Thhalv10002504m.g Eutrema salsugineum HOM05D006616 ORTHO05D008435 6.5e-98 362.1 470 53.0
Sp4g23340 Schrenkiella parvula HOM05D006616 ORTHO05D008435 6.5e-98 362.1 472 52.8
C04p68740 Brassica napus HOM05D006616 ORTHO05D008435 8.5e-98 361.7 454 54.4
Nitab4.5_0001168g0150 Nicotiana tabacum HOM05D006616 ORTHO05D008435 5.5e-97 359.0 473 46.7
Lsat_1_v5_gn_6_110180 Lactuca sativa HOM05D006616 ORTHO05D008435 4.7e-96 355.9 462 53.9
BraA04t18591Z Brassica rapa HOM05D006616 ORTHO05D002641 1.2e-94 351.3 472 52.3
A04p31340 Brassica napus HOM05D006616 ORTHO05D002641 5.7e-94 349.0 462 52.6
PSO017G2359 Papaver somniferum HOM05D006616 ORTHO05D008435 7.5e-94 348.6 403 56.3
Carub.0004s2335 Capsella rubella HOM05D006616 ORTHO05D008435 9.8e-94 348.2 471 53.3
BolC4t28379H Brassica oleracea HOM05D006616 ORTHO05D008435 1.7e-93 347.4 447 53.5
FvH4_1g29230 Fragaria vesca HOM05D006616 ORTHO05D008435 2.9e-90 336.7 477 52.8
CARHR136140 Cardamine hirsuta HOM05D006616 ORTHO05D008435 9.4e-89 331.6 438 53.2
ClCG10G015990 Citrullus lanatus HOM05D006616 ORTHO05D008435 6.8e-87 325.5 485 50.1
Pp3c10_1890 Physcomitrium patens HOM05D006616 ORTHO05D008435 6.8e-87 325.5 541 45.7
Pp3c10_1896 Physcomitrium patens HOM05D006616 ORTHO05D008435 6.8e-87 325.5 541 45.7
Mapoly0043s0041 Marchantia polymorpha HOM05D006616 ORTHO05D008435 5.4e-84 315.8 559 44.2
Haze_20291 Corylus avellana HOM05D006616 ORTHO05D008435 6.6e-82 308.9 744 38.6
MELO3C009780.2 Cucumis melo HOM05D006616 ORTHO05D008435 7.3e-81 305.4 588 44.6
Hma1.2p1_2178F.1_g316200 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 2.7e-59 233.8 264 50.8
Nitab4.5_0003863g0020 Nicotiana tabacum HOM05D006616 ORTHO05D008435 2.1e-56 224.2 303 43.6
Sc13g0000840 Simmondsia chinensis HOM05D006616 ORTHO05D008435 3.6e-56 223.4 216 58.3
Nitab4.5_0003863g0030 Nicotiana tabacum HOM05D006616 ORTHO05D008435 3.3e-49 200.3 224 51.8
AagrBONN_evm.TU.Sc2ySwM_228.200 Anthoceros agrestis HOM05D006616 ORTHO05D008435 1.2e-48 198.4 272 44.1
SEGI_28853 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 1.7e-45 188.0 362 42.8
SEGI_15760 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 4.9e-45 186.4 150 68.0
Cpa.g.sc33.190 Carica papaya HOM05D006616 ORTHO05D008435 1.0e-42 178.7 220 47.7
Actinidia25416 Actinidia chinensis HOM05D006616 ORTHO05D008435 3.8e-37 160.2 232 44.0
vmacro00862 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 1.9e-36 157.9 110 76.4
COL.COLO4_33517 Corchorus olitorius HOM05D006616 ORTHO05D008435 9.3e-36 155.6 174 53.4
SMO339G0010 Selaginella moellendorffii HOM05D006616 ORTHO05D008435 2.7e-35 154.1 98 77.6
FAN23G2418 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.1e-31 142.1 82 91.5
CBR_g8767 Chara braunii HOM05D006616 ORTHO05D008435 5.8e-30 136.3 407 36.1
Migut.C01363 Erythranthe guttata HOM05D006616 ORTHO05D008435 4.6e-27 126.7 171 47.4
Psat1g016240 Pisum sativum HOM05D006616 ORTHO05D008435 2.8e-24 117.5 147 47.6
Psat7g065560 Pisum sativum HOM05D006616 ORTHO05D008435 1.1e-23 115.5 147 46.9
MCO09G511 Micromonas commoda HOM05D006616 ORTHO05D008435 1.8e-23 114.8 329 40.1
SHI24850 Sapria himalayana HOM05D006616 ORTHO05D008435 4.5e-22 110.2 150 42.7
vmacro00863 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 1.7e-21 108.2 88 64.8
MBI16_g47221_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 3.9e-18 97.1 181 39.8
Cre12.g527600 Chlamydomonas reinhardtii HOM05D006616 ORTHO05D008435 1.6e-16 91.7 311 38.6
Actinidia29490 Actinidia chinensis HOM05D006616 ORTHO05D008435 4.1e-15 87.0 90 51.1
PSO478G1191 Papaver somniferum HOM05D006616 ORTHO05D008435 1.0e-13 82.4 183 43.2
BcaC02g07966 Brassica carinata HOM05D001681 ORTHO05D001589 2.5e-12 77.8 50 80.0


User provided reference genes

Program Settings