Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g01510 Coffea canephora HOM05D000032 ORTHO05D016918 6.7e-46 187.2 108 100.0
Cc00_g14370 Coffea canephora HOM05D000032 ORTHO05D006669 8.4e-41 170.2 107 93.5
QL02p011979 Quercus lobata HOM05D000032 ORTHO05D006669 3.1e-27 125.2 109 67.9
Ciclev10000409m.g Citrus clementina HOM05D000032 ORTHO05D006669 7.7e-26 120.6 109 69.7
Dinv15073 Davidia involucrata HOM05D000032 ORTHO05D006669 2.9e-25 118.6 109 68.8
QL12p004290 Quercus lobata HOM05D000032 ORTHO05D006669 6.5e-25 117.5 109 67.0
Oeu007360.3 Olea europaea HOM05D000032 ORTHO05D006669 8.5e-25 117.1 119 62.2
Atru.chr13.268 Acer truncatum HOM05D000032 ORTHO05D006669 3.2e-24 115.2 109 66.1
CSS0021497 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D006669 5.5e-24 114.4 109 66.1
CSS0023183 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D006669 5.5e-24 114.4 109 66.1
Thecc.08G046400 Theobroma cacao HOM05D000032 ORTHO05D006669 1.0e-22 110.2 109 65.1
Atru.chr11.1620 Acer truncatum HOM05D000032 ORTHO05D006669 1.8e-22 109.4 100 66.0
Glyma.18G101600 Glycine max HOM05D000032 ORTHO05D006669 1.8e-22 109.4 110 63.6
Dinv39530 Davidia involucrata HOM05D000032 ORTHO05D006669 5.1e-22 107.8 109 63.3
Gorai.009G193900 Gossypium raimondii HOM05D000032 ORTHO05D006669 5.1e-22 107.8 109 64.2
Lalb_Chr20g0113951 Lupinus albus HOM05D000032 ORTHO05D006669 6.7e-22 107.5 107 64.5
Phvul.006G039100 Phaseolus vulgaris HOM05D000032 ORTHO05D006669 6.7e-22 107.5 110 61.8
Haze_22652 Corylus avellana HOM05D000032 ORTHO05D006669 1.1e-21 106.7 109 62.4
Duzib093G1385 Durio zibethinus HOM05D000032 ORTHO05D006669 2.0e-21 105.9 109 63.3
CiPaw.07G148200 Carya illinoinensis HOM05D000032 ORTHO05D006669 2.6e-21 105.5 110 62.7
Migut.C00853 Erythranthe guttata HOM05D000032 ORTHO05D006669 2.6e-21 105.5 109 62.4
Glyma.08G313100 Glycine max HOM05D000032 ORTHO05D006669 3.3e-21 105.1 109 64.2
Lj6g0027027 Lotus japonicus HOM05D000032 ORTHO05D006669 3.3e-21 105.1 112 60.7
VMungo0540G0072 Vigna mungo HOM05D000032 ORTHO05D006669 5.7e-21 104.4 110 60.0
Lj6g0002233 Lotus japonicus HOM05D000032 ORTHO05D006669 1.7e-20 102.8 111 60.4
Lj1C1148G8 Lonicera japonica HOM05D000032 ORTHO05D006669 2.2e-20 102.4 107 63.6
CANSAT64G1040 Cannabis sativa HOM05D000032 ORTHO05D006669 4.8e-20 101.3 107 61.7
ClCG09G010550 Citrullus lanatus HOM05D000032 ORTHO05D006669 4.8e-20 101.3 109 63.3
Gohir.D05G188600 Gossypium hirsutum HOM05D000032 ORTHO05D006669 4.8e-20 101.3 109 61.5
MBI05_g23391_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D006669 4.8e-20 101.3 109 56.9
TWI56G0435 Tripterygium wilfordii HOM05D000032 ORTHO05D006669 6.3e-20 100.9 110 60.9
COL.COLO4_26129 Corchorus olitorius HOM05D000032 ORTHO05D006669 8.2e-20 100.5 109 63.3
Potri.005G241300 Populus trichocarpa HOM05D000032 ORTHO05D006669 1.4e-19 99.8 110 60.0
Eucgr.A00214 Eucalyptus grandis HOM05D000032 ORTHO05D006669 3.1e-19 98.6 98 59.2
Hma1.2p1_0274F.1_g110360 Hydrangea macrophylla HOM05D000032 ORTHO05D006669 5.3e-19 97.8 88 69.3
MD01G1061100 Malus domestica HOM05D000032 ORTHO05D006669 5.3e-19 97.8 107 58.9
Potri.002G020101 Populus trichocarpa HOM05D000032 ORTHO05D016918 5.3e-19 97.8 110 59.1
TWI36G0775 Tripterygium wilfordii HOM05D000032 ORTHO05D006669 5.3e-19 97.8 110 60.0
Gohir.A05G185800 Gossypium hirsutum HOM05D000032 ORTHO05D006669 1.2e-18 96.7 109 59.6
PGSC0003DMG400009873 Solanum tuberosum HOM05D000032 ORTHO05D006669 3.4e-18 95.1 107 57.9
Nn5g30744 Nelumbo nucifera HOM05D000032 ORTHO05D006669 5.9e-18 94.4 98 58.2
SGA_v2.0_scaffold92G28212 Striga asiatica HOM05D000032 ORTHO05D006669 1.3e-17 93.2 111 58.6
Cpa.g.sc29.166 Carica papaya HOM05D000032 ORTHO05D006669 1.7e-17 92.8 109 61.5
Sopen04g035190 Solanum pennellii HOM05D000032 ORTHO05D006669 2.9e-17 92.0 107 56.1
Sed0016675 Sechium edule HOM05D000032 ORTHO05D006669 3.8e-17 91.7 107 57.9
MELO3C003842.2 Cucumis melo HOM05D000032 ORTHO05D006669 1.1e-16 90.1 96 60.4
CsaV3_3G045070 Cucumis sativus L. HOM05D000032 ORTHO05D006669 1.1e-16 90.1 96 60.4
Hund01599 Selenicereus undatus HOM05D000032 ORTHO05D006669 1.1e-16 90.1 109 55.0
Ca_14808_v3 Cicer arietinum L. HOM05D000032 ORTHO05D006669 1.4e-16 89.7 114 57.0
Lsat_1_v5_gn_8_10200 Lactuca sativa HOM05D000032 ORTHO05D006669 1.9e-16 89.4 106 59.4
Medtr2g041140 Medicago truncatula HOM05D000032 ORTHO05D006669 3.2e-16 88.6 111 54.1
Peaxi162Scf00553g00813 Petunia axillaris HOM05D000032 ORTHO05D006669 4.2e-16 88.2 108 53.7
FvH4_2g38260 Fragaria vesca HOM05D000032 ORTHO05D006669 9.4e-16 87.0 105 54.3
Rhsim06G0019900 Rhododendron simsii HOM05D000032 ORTHO05D006669 9.4e-16 87.0 73 67.1
PGR042G0181 Punica granatum HOM05D000032 ORTHO05D006669 6.1e-15 84.3 110 54.5
EL10Ac1g02170 Beta vulgaris HOM05D000032 ORTHO05D006669 8.0e-15 84.0 110 51.8
Actinidia16996 Actinidia chinensis HOM05D000032 ORTHO05D006669 3.0e-14 82.0 109 56.9
CDE04G2938 Ceratophyllum demersum HOM05D000032 ORTHO05D006669 3.0e-14 82.0 109 49.5
FAN27G2308 Fragaria x ananassa HOM05D000032 ORTHO05D006669 3.0e-14 82.0 105 54.3
HanXRQChr13g0412281 Helianthus annuus HOM05D000032 ORTHO05D006669 3.0e-14 82.0 99 57.6
TPR.G11499 Trifolium pratense HOM05D000032 ORTHO05D006669 3.0e-14 82.0 111 54.1
RcHm_v2.0_Chr6g0303111 Rosa chinensis HOM05D000032 ORTHO05D006669 3.9e-14 81.6 108 50.9
Aqoxy7G02510 Aquilegia oxysepala HOM05D000032 ORTHO05D006669 8.8e-14 80.5 91 56.0
MD15G1442800 Malus domestica HOM05D000032 ORTHO05D016918 2.0e-13 79.3 80 56.2
Carub.0007s2477 Capsella rubella HOM05D000032 ORTHO05D006669 5.7e-13 77.8 125 50.4
Zm00001eb102610 Zea mays HOM05D000032 ORTHO05D006669 5.7e-13 77.8 108 51.9
CDE02G3483 Ceratophyllum demersum HOM05D000032 ORTHO05D006669 7.4e-13 77.4 108 48.1
Ah.00g000290 Amaranthus hybridus HOM05D000032 ORTHO05D006669 2.8e-12 75.5 99 53.5
ATR0090G023 Amborella trichopoda HOM05D000032 ORTHO05D006669 2.8e-12 75.5 107 46.7
TAR628G0705 Trochodendron aralioides HOM05D000032 ORTHO05D006669 4.8e-12 74.7 91 57.1
CAN.G311.43 Capsicum annuum HOM05D000032 ORTHO05D006669 1.1e-11 73.6 89 52.8
BraA08t33251Z Brassica rapa HOM05D000032 ORTHO05D006669 1.8e-11 72.8 118 46.6
arahy.Tifrunner.gnm1.ann1.B7U3FX Arachis hypogaea HOM05D002394 ORTHO05D002508 7.0e-11 70.9 71 64.8
ECA238G1643 Erigeron canadensis HOM05D000032 ORTHO05D006669 7.0e-11 70.9 100 53.0
Medtr3g049990 Medicago truncatula HOM05D000032 ORTHO05D006669 7.0e-11 70.9 83 57.8
THA.LOC104815496 Tarenaya hassleriana HOM05D000032 ORTHO05D006669 7.0e-11 70.9 129 49.6
DCAR_023755 Daucus carota HOM05D000032 ORTHO05D006669 9.1e-11 70.5 89 55.1
PSO541G2252 Papaver somniferum HOM05D000032 ORTHO05D006669 9.1e-11 70.5 89 55.1
Cfa013970 Carpinus fangiana HOM05D000032 ORTHO05D016918 1.6e-10 69.7 87 56.3
Prupe.1G363600 Prunus persica HOM05D000032 ORTHO05D006669 2.6e-10 68.9 69 62.3
Psat5g176240 Pisum sativum HOM05D000032 ORTHO05D006669 7.7e-10 67.4 68 64.7
arahy.Tifrunner.gnm1.ann1.KG3JNQ Arachis hypogaea HOM05D000032 ORTHO05D006669 1.3e-09 66.6 109 47.7
Nitab4.5_0005970g0030 Nicotiana tabacum HOM05D000032 ORTHO05D006669 1.7e-09 66.2 62 61.3
arahy.Tifrunner.gnm1.ann1.CZI2M2 Arachis hypogaea HOM05D000032 ORTHO05D006669 2.9e-09 65.5 109 46.8
AL7G38120 Arabidopsis lyrata HOM05D000032 ORTHO05D006669 6.5e-09 64.3 122 45.9
ECA240G2120 Erigeron canadensis HOM05D000032 ORTHO05D006669 1.1e-08 63.5 100 49.0
AT4G16630 Arabidopsis thaliana HOM05D000032 ORTHO05D006669 1.5e-08 63.2 124 42.7
FAN20G2235 Fragaria x ananassa HOM05D000032 ORTHO05D006669 1.5e-08 63.2 88 50.0
HPP92_018598 Vanilla planifolia HOM05D000032 ORTHO05D006669 1.5e-08 63.2 109 50.5
Sabra05G0186800 Salix brachista HOM05D000032 ORTHO05D006669 3.2e-08 62.0 67 58.2
Sc15g0004880 Simmondsia chinensis HOM05D000032 ORTHO05D006669 3.2e-08 62.0 93 47.3
HPP92_018594 Vanilla planifolia HOM05D000032 ORTHO05D032836 9.4e-08 60.5 109 49.5
HanXRQChr16g0529991 Helianthus annuus HOM05D000032 ORTHO05D006669 1.2e-07 60.1 49 69.4
TPR.G35214 Trifolium pratense HOM05D026687 ORTHO05D016918 1.2e-07 60.1 94 54.3
PSO675G8850 Papaver somniferum HOM05D000032 ORTHO05D006669 4.7e-07 58.2 65 58.5
GSVIVG01009935001 Vitis vinifera HOM05D000032 ORTHO05D006669 1.0e-06 57.0 64 57.8
TPR.G7711 Trifolium pratense HOM05D026687 ORTHO05D016918 1.8e-06 56.2 95 50.5
BcaC07g38004 Brassica carinata HOM05D000032 ORTHO05D006669 2.3e-06 55.8 71 50.7
BolC8t48384H Brassica oleracea HOM05D000032 ORTHO05D006669 2.3e-06 55.8 71 50.7
TPR.G35212 Trifolium pratense HOM05D026687 ORTHO05D016918 2.3e-06 55.8 93 50.5
Aa31LG2G12780 Aethionema arabicum HOM05D000032 ORTHO05D006669 3.0e-06 55.5 106 43.4
A08p12610 Brassica napus HOM05D000032 ORTHO05D006669 6.7e-06 54.3 70 50.0
AUR62041487 Chenopodium quinoa HOM05D000032 ORTHO05D006669 6.7e-06 54.3 65 50.8
BraA01t01995Z Brassica rapa HOM05D000032 ORTHO05D006669 8.8e-06 53.9 78 47.4
SHI08056 Sapria himalayana HOM05D000032 ORTHO05D006669 8.8e-06 53.9 111 40.5


User provided reference genes

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