Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc10_g01080 Coffea canephora HOM05D004247 ORTHO05D004994 2.0e-81 305.8 168 100.0
TWI56G0334 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 9.3e-63 243.8 169 79.9
Nitab4.5_0003030g0010 Nicotiana tabacum HOM05D004247 ORTHO05D004994 4.6e-62 241.5 170 77.6
GSVIVG01008733001 Vitis vinifera HOM05D004247 ORTHO05D004994 7.9e-62 240.7 169 77.5
QL02p013016 Quercus lobata HOM05D004247 ORTHO05D004994 1.0e-61 240.4 169 77.5
Haze_22717 Corylus avellana HOM05D004247 ORTHO05D004994 1.8e-61 239.6 169 78.1
Ciclev10002698m.g Citrus clementina HOM05D004247 ORTHO05D004994 3.0e-61 238.8 169 76.3
Potri.002G016000 Populus trichocarpa HOM05D004247 ORTHO05D004994 3.0e-61 238.8 169 76.9
CiPaw.08G069600 Carya illinoinensis HOM05D004247 ORTHO05D004994 6.7e-61 237.7 169 76.9
Peaxi162Scf00174g00103 Petunia axillaris HOM05D004247 ORTHO05D004994 6.7e-61 237.7 169 77.5
Dinv31897 Davidia involucrata HOM05D004247 ORTHO05D004994 8.7e-61 237.3 161 79.5
Cfa014015 Carpinus fangiana HOM05D004247 ORTHO05D004994 1.5e-60 236.5 169 77.5
Potri.005G246100 Populus trichocarpa HOM05D004247 ORTHO05D004994 1.5e-60 236.5 169 74.6
RcHm_v2.0_Chr6g0303721 Rosa chinensis HOM05D004247 ORTHO05D004994 1.9e-60 236.1 168 75.6
FvH4_2g37890 Fragaria vesca HOM05D004247 ORTHO05D004994 4.3e-60 235.0 169 75.7
FAN27G2657 Fragaria x ananassa HOM05D004247 ORTHO05D004994 5.7e-60 234.6 169 75.1
arahy.Tifrunner.gnm1.ann1.X5CP5W Arachis hypogaea HOM05D004247 ORTHO05D004994 7.4e-60 234.2 171 76.6
COL.COLO4_26078 Corchorus olitorius HOM05D004247 ORTHO05D004994 7.4e-60 234.2 169 75.7
FAN20G0823 Fragaria x ananassa HOM05D004247 ORTHO05D004994 7.4e-60 234.2 169 74.6
arahy.Tifrunner.gnm1.ann1.X4SEKR Arachis hypogaea HOM05D004247 ORTHO05D004994 9.7e-60 233.8 171 76.6
Sabra05G0190200 Salix brachista HOM05D004247 ORTHO05D004994 9.7e-60 233.8 169 74.0
Thecc.08G052400 Theobroma cacao HOM05D004247 ORTHO05D004994 9.7e-60 233.8 168 73.2
Duzib116G0390 Durio zibethinus HOM05D004247 ORTHO05D004994 1.3e-59 233.4 169 75.7
Glyma.04G020300 Glycine max HOM05D004247 ORTHO05D004994 1.6e-59 233.0 169 77.5
FAN15G0804 Fragaria x ananassa HOM05D004247 ORTHO05D004994 2.8e-59 232.3 169 74.6
Gorai.009G190800 Gossypium raimondii HOM05D004247 ORTHO05D004994 2.8e-59 232.3 169 75.1
Lj4C16T12 Lonicera japonica HOM05D004247 ORTHO05D004994 2.8e-59 232.3 169 73.4
Gohir.D05G185400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 3.7e-59 231.9 169 75.1
Hma1.2p1_3012F.1_g331630 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 3.7e-59 231.9 169 75.7
Lsat_1_v5_gn_0_680 Lactuca sativa HOM05D004247 ORTHO05D004994 3.7e-59 231.9 168 73.2
Sabra02G0012900 Salix brachista HOM05D004247 ORTHO05D004994 3.7e-59 231.9 168 75.0
CiPaw.07G143100 Carya illinoinensis HOM05D004247 ORTHO05D004994 4.8e-59 231.5 169 75.1
MD15G1006300 Malus domestica HOM05D004247 ORTHO05D004994 4.8e-59 231.5 170 77.1
Actinidia37957 Actinidia chinensis HOM05D004247 ORTHO05D004994 6.3e-59 231.1 168 75.6
ClCG05G015390 Citrullus lanatus HOM05D004247 ORTHO05D004994 6.3e-59 231.1 169 74.0
Phvul.009G020300 Phaseolus vulgaris HOM05D004247 ORTHO05D004994 6.3e-59 231.1 169 75.7
VMungo1309G1934 Vigna mungo HOM05D004247 ORTHO05D004994 6.3e-59 231.1 169 75.1
Hma1.2p1_2322F.1_g319850 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 8.2e-59 230.7 169 75.1
Prupe.1G358900 Prunus persica HOM05D004247 ORTHO05D004994 1.4e-58 229.9 169 73.4
Cpa.g.sc26.256 Carica papaya HOM05D004247 ORTHO05D004994 4.1e-58 228.4 170 73.5
Nitab4.5_0007524g0020 Nicotiana tabacum HOM05D004247 ORTHO05D004994 4.1e-58 228.4 170 73.5
Gohir.A05G182400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 6.9e-58 227.6 169 74.6
PSO541G1800 Papaver somniferum HOM05D004247 ORTHO05D004994 9.0e-58 227.3 168 72.0
Glyma.06G020400 Glycine max HOM05D004247 ORTHO05D004994 1.2e-57 226.9 168 75.0
Lj1g0015317 Lotus japonicus HOM05D004247 ORTHO05D004994 1.5e-57 226.5 171 73.7
PSO675G9160 Papaver somniferum HOM05D004247 ORTHO05D004994 1.5e-57 226.5 169 73.4
CSS0046333 Camellia sinensis var. sinensis HOM05D004247 ORTHO05D004994 2.0e-57 226.1 173 75.7
THA.LOC104813771 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 2.0e-57 226.1 169 72.2
Nitab4.5_0001936g0030 Nicotiana tabacum HOM05D004247 ORTHO05D004994 4.5e-57 224.9 170 72.4
Hma1.2p1_0023F.1_g015810 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 5.9e-57 224.6 173 73.4
MELO3C003725.2 Cucumis melo HOM05D004247 ORTHO05D004994 7.7e-57 224.2 169 72.8
Rhsim07G0251400 Rhododendron simsii HOM05D004247 ORTHO05D004994 7.7e-57 224.2 169 73.4
Ah.04g150590 Amaranthus hybridus HOM05D004247 ORTHO05D004994 1.7e-56 223.0 169 69.8
CAN.G311.79 Capsicum annuum HOM05D004247 ORTHO05D004994 2.2e-56 222.6 168 73.2
Ca_15453_v3 Cicer arietinum L. HOM05D004247 ORTHO05D004994 2.2e-56 222.6 168 70.8
MD08G1007200 Malus domestica HOM05D004247 ORTHO05D004994 2.2e-56 222.6 170 73.5
CsaV3_3G046150 Cucumis sativus L. HOM05D004247 ORTHO05D004994 2.9e-56 222.2 169 71.6
Lalb_Chr03g0033581 Lupinus albus HOM05D004247 ORTHO05D004994 2.9e-56 222.2 169 72.2
Sc26g0004480 Simmondsia chinensis HOM05D004247 ORTHO05D004994 3.8e-56 221.9 170 70.0
ECA232G0296 Erigeron canadensis HOM05D004247 ORTHO05D004994 5.0e-56 221.5 168 72.0
Lalb_Chr01g0008481 Lupinus albus HOM05D004247 ORTHO05D004994 5.0e-56 221.5 169 71.0
Lsat_1_v5_gn_8_28601 Lactuca sativa HOM05D004247 ORTHO05D004994 6.5e-56 221.1 169 70.4
Manes.05G142000 Manihot esculenta HOM05D004247 ORTHO05D004994 6.5e-56 221.1 170 72.4
TAR381G1019 Trochodendron aralioides HOM05D004247 ORTHO05D004994 6.5e-56 221.1 169 74.6
Sp1g18060 Schrenkiella parvula HOM05D004247 ORTHO05D004994 1.1e-55 220.3 168 70.8
Thhalv10008749m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 1.4e-55 219.9 168 70.8
CANSAT25G3567 Cannabis sativa HOM05D004247 ORTHO05D004994 2.5e-55 219.2 172 68.6
A07p15730 Brassica napus HOM05D004247 ORTHO05D004994 3.2e-55 218.8 168 69.6
A07p15830 Brassica napus HOM05D004247 ORTHO05D004994 3.2e-55 218.8 168 69.6
BraA07t29309Z Brassica rapa HOM05D004247 ORTHO05D004994 3.2e-55 218.8 168 69.6
Migut.N03188 Erythranthe guttata HOM05D004247 ORTHO05D004994 3.2e-55 218.8 171 70.8
MBI05_g34744_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 3.2e-55 218.8 169 72.8
Rhsim06G0011800 Rhododendron simsii HOM05D004247 ORTHO05D004994 4.2e-55 218.4 166 71.7
MBI08_g05719_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 7.2e-55 217.6 165 75.2
Oeu021483.1 Olea europaea HOM05D004247 ORTHO05D004994 7.2e-55 217.6 170 71.8
Aqoxy6G01936 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 9.4e-55 217.2 169 70.4
CARHR020810 Cardamine hirsuta HOM05D004247 ORTHO05D004994 9.4e-55 217.2 172 70.9
TAR625G1162 Trochodendron aralioides HOM05D004247 ORTHO05D004994 9.4e-55 217.2 169 71.0
Lalb_Chr19g0131621 Lupinus albus HOM05D004247 ORTHO05D004994 1.6e-54 216.5 173 69.9
BcaB07g32038 Brassica carinata HOM05D004247 ORTHO05D004994 2.1e-54 216.1 168 70.2
BcaNung03373 Brassica carinata HOM05D004247 ORTHO05D004994 2.1e-54 216.1 168 68.5
C07p23120 Brassica napus HOM05D004247 ORTHO05D004994 2.1e-54 216.1 168 68.5
BolC7t42849H Brassica oleracea HOM05D004247 ORTHO05D004994 2.7e-54 215.7 168 68.5
Medtr3g114850 Medicago truncatula HOM05D004247 ORTHO05D004994 2.7e-54 215.7 168 69.0
Oeu051143.1 Olea europaea HOM05D004247 ORTHO05D004994 2.7e-54 215.7 169 71.0
Sed0002819 Sechium edule HOM05D004247 ORTHO05D004994 2.7e-54 215.7 168 71.4
TPR.G38114 Trifolium pratense HOM05D004247 ORTHO05D004994 2.7e-54 215.7 168 67.9
Lj4P802T100 Lonicera japonica HOM05D004247 ORTHO05D004994 4.6e-54 214.9 170 69.4
Psat5g011080 Pisum sativum HOM05D004247 ORTHO05D004994 6.1e-54 214.5 171 69.6
THA.LOC104809663 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 6.1e-54 214.5 171 67.8
Carub.0001s1985 Capsella rubella HOM05D004247 ORTHO05D004994 7.9e-54 214.2 168 70.2
Oeu027609.1 Olea europaea HOM05D004247 ORTHO05D004994 7.9e-54 214.2 169 70.4
AL1G33170 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 1.0e-53 213.8 168 69.6
SGA_v2.0_scaffold19G08591 Striga asiatica HOM05D004247 ORTHO05D004994 1.8e-53 213.0 165 72.1
AT1G20340 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 2.3e-53 212.6 168 68.5
BcaC05g25945 Brassica carinata HOM05D004247 ORTHO05D004994 2.3e-53 212.6 169 69.2
C05p18970 Brassica napus HOM05D004247 ORTHO05D004994 2.3e-53 212.6 169 69.2
BolC5t30597H Brassica oleracea HOM05D004247 ORTHO05D004994 2.3e-53 212.6 169 69.2
A06p16430 Brassica napus HOM05D004247 ORTHO05D004994 3.9e-53 211.8 168 69.6
BraA06t24747Z Brassica rapa HOM05D004247 ORTHO05D004994 3.9e-53 211.8 168 69.6
ECA233G0125 Erigeron canadensis HOM05D004247 ORTHO05D004994 5.1e-53 211.5 161 70.2
SalBow6G1848 Salvia bowleyana HOM05D004247 ORTHO05D004994 1.5e-52 209.9 168 67.9
A08p29430 Brassica napus HOM05D004247 ORTHO05D004994 2.5e-52 209.1 169 69.2
BraA08t34878Z Brassica rapa HOM05D004247 ORTHO05D004994 2.5e-52 209.1 169 69.2
DCAR_013894 Daucus carota HOM05D004247 ORTHO05D004994 2.5e-52 209.1 169 69.2
C08p20070 Brassica napus HOM05D004247 ORTHO05D004994 3.3e-52 208.8 169 68.6
AL2G36140 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 4.3e-52 208.4 172 66.3
BcaC07g39030 Brassica carinata HOM05D004247 ORTHO05D004994 5.7e-52 208.0 169 68.6
BcaB03g12872 Brassica carinata HOM05D004247 ORTHO05D004994 7.4e-52 207.6 170 68.2
PGR031G2466 Punica granatum HOM05D004247 ORTHO05D004994 9.7e-52 207.2 170 70.6
Sed0013890 Sechium edule HOM05D004247 ORTHO05D004994 9.7e-52 207.2 168 68.5
TWI12G1003 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 9.7e-52 207.2 156 75.6
CARHR069640 Cardamine hirsuta HOM05D004247 ORTHO05D004994 1.7e-51 206.5 172 66.9
AT1G76100 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 6.3e-51 204.5 172 67.4
ATR0661G060 Amborella trichopoda HOM05D004247 ORTHO05D004994 1.1e-50 203.8 169 69.2
BolC8t49642H Brassica oleracea HOM05D004247 ORTHO05D004994 1.1e-50 203.8 166 68.1
Thhalv10019237m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 3.1e-50 202.2 169 68.0
EL10Ac1g02063 Beta vulgaris HOM05D004247 ORTHO05D004994 4.1e-50 201.8 161 67.7
HanXRQChr05g0146621 Helianthus annuus HOM05D004247 ORTHO05D004994 4.1e-50 201.8 168 67.9
ECA232G3771 Erigeron canadensis HOM05D004247 ORTHO05D004994 6.9e-50 201.1 168 66.1
Aqoxy6G01937 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 9.1e-50 200.7 169 66.3
Sp5g31220 Schrenkiella parvula HOM05D004247 ORTHO05D004994 9.1e-50 200.7 170 65.9
Aa31LG4G6220 Aethionema arabicum HOM05D004247 ORTHO05D004994 1.2e-49 200.3 166 66.3
Aa31LG7G4700 Aethionema arabicum HOM05D004247 ORTHO05D004994 1.5e-49 199.9 168 64.3
A07p41660 Brassica napus HOM05D004247 ORTHO05D004994 2.6e-49 199.1 171 64.3
CDE02G3101 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 2.6e-49 199.1 165 64.8
BraA07t31695Z Brassica rapa HOM05D004247 ORTHO05D004994 3.4e-49 198.7 171 64.3
BcaC08g47103 Brassica carinata HOM05D004247 ORTHO05D004994 4.5e-49 198.4 170 64.1
C06p50040 Brassica napus HOM05D004247 ORTHO05D004994 4.5e-49 198.4 171 64.3
BcaC08g47292 Brassica carinata HOM05D004247 ORTHO05D004994 7.7e-49 197.6 171 64.3
BolC6t40043H Brassica oleracea HOM05D004247 ORTHO05D004994 7.7e-49 197.6 171 64.3
Solyc04g082010.1 Solanum lycopersicum HOM05D004247 ORTHO05D004994 1.0e-48 197.2 176 64.8
Sopen04g035660 Solanum pennellii HOM05D004247 ORTHO05D004994 1.0e-48 197.2 176 64.8
CDE04G1887 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 1.7e-48 196.4 158 69.0
PGSC0003DMG400041620 Solanum tuberosum HOM05D004247 ORTHO05D004994 1.6e-46 189.9 171 63.2
unitig_899.g15551 Utricularia gibba HOM05D004247 ORTHO05D004994 2.7e-46 189.1 171 66.7
Migut.C00904 Erythranthe guttata HOM05D004247 ORTHO05D004994 1.4e-45 186.8 169 62.7
Nn6g31900 Nelumbo nucifera HOM05D004247 ORTHO05D004994 3.7e-43 178.7 145 72.4
AUR62036731 Chenopodium quinoa HOM05D004247 ORTHO05D004994 7.0e-42 174.5 102 82.4
Os06g0101600 Oryza sativa ssp. japonica HOM05D004247 ORTHO05D004994 1.2e-41 173.7 169 62.7
Zm00001eb268360 Zea mays HOM05D004247 ORTHO05D004994 3.5e-41 172.2 169 62.1
AUR62013862 Chenopodium quinoa HOM05D004247 ORTHO05D004994 1.0e-40 170.6 102 80.4
Zm00001eb379570 Zea mays HOM05D004247 ORTHO05D004994 5.5e-39 164.9 170 60.0
Dinv39560 Davidia involucrata HOM05D004247 ORTHO05D004994 7.2e-39 164.5 100 77.0
SEGI_02730 Sequoiadendron giganteum HOM05D004247 ORTHO05D004994 2.1e-38 162.9 174 57.5
TPR.G8442 Trifolium pratense HOM05D004247 ORTHO05D004994 4.7e-38 161.8 99 77.8
Sc02g0008920 Simmondsia chinensis HOM05D004247 ORTHO05D004994 4.1e-34 148.7 125 64.8
Pp3c19_21160 Physcomitrium patens HOM05D004247 ORTHO05D004994 7.7e-33 144.4 171 50.3
HPP92_015000 Vanilla planifolia HOM05D004247 ORTHO05D004994 7.7e-33 144.4 219 45.7
AagrBONN_evm.TU.Sc2ySwM_228.703 Anthoceros agrestis HOM05D004247 ORTHO05D004994 1.0e-32 144.1 174 48.3
Pp3c21_4230 Physcomitrium patens HOM05D004247 ORTHO05D004994 1.2e-30 137.1 167 48.5
SMO351G0102 Selaginella moellendorffii HOM05D004247 ORTHO05D004994 5.2e-29 131.7 174 43.1
CBR_g18572 Chara braunii HOM05D004247 ORTHO05D004994 1.2e-28 130.6 171 48.0
Cre03.g182551 Chlamydomonas reinhardtii HOM05D004247 ORTHO05D004994 2.0e-28 129.8 148 52.7
Pp3c18_13090 Physcomitrium patens HOM05D004247 ORTHO05D004994 2.0e-28 129.8 170 45.9
PRCOL_00002380 Prasinoderma coloniale HOM05D004247 ORTHO05D004994 1.3e-27 127.1 133 54.1
Mapoly0080s0027 Marchantia polymorpha HOM05D004247 ORTHO05D004994 1.1e-26 124.0 169 46.2
Atru.chr13.210 Acer truncatum HOM05D004247 ORTHO05D004994 1.8e-26 123.2 178 50.0
Nitab4.5_0006806g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 4.1e-26 122.1 70 78.6
Nitab4.5_0001476g0060 Nicotiana tabacum HOM05D004247 ORTHO05D004994 3.5e-25 119.0 70 75.7
Cc01_g01310 Coffea canephora HOM05D004247 ORTHO05D004994 1.2e-22 110.5 72 97.2
MCO15G475 Micromonas commoda HOM05D004247 ORTHO05D004994 2.1e-22 109.8 164 44.5
Nitab4.5_0002353g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.8e-18 96.7 67 70.1
Cc01_g01320 Coffea canephora HOM05D004247 ORTHO05D004994 4.5e-17 92.0 44 97.7
Nitab4.5_0000498g0120 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.6e-14 83.6 81 54.3


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