Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc09_g08590 Coffea canephora HOM05D004632 ORTHO05D005556 1.2e-270 936.4 675 100.0
Dinv34967 Davidia involucrata HOM05D004632 ORTHO05D005556 1.1e-210 737.3 675 84.0
CSS0008139 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 1.5e-207 726.9 675 84.1
Rhsim02G0214000 Rhododendron simsii HOM05D004632 ORTHO05D005556 5.6e-207 724.9 674 83.5
Actinidia22297 Actinidia chinensis HOM05D004632 ORTHO05D005556 1.0e-197 694.1 672 82.1
CAN.G199.61 Capsicum annuum HOM05D004632 ORTHO05D005556 2.3e-197 693.0 675 80.9
GSVIVG01035887001 Vitis vinifera HOM05D004632 ORTHO05D005556 6.8e-197 691.4 676 81.2
Prupe.1G392800 Prunus persica HOM05D004632 ORTHO05D005556 3.5e-193 679.1 676 80.5
PSO782G2171 Papaver somniferum HOM05D004632 ORTHO05D005556 1.0e-192 677.6 672 79.6
Peaxi162Scf00430g00519 Petunia axillaris HOM05D004632 ORTHO05D005556 1.0e-192 677.6 677 80.6
Nn8g39852 Nelumbo nucifera HOM05D004632 ORTHO05D005556 2.3e-192 676.4 675 79.7
CsaV3_4G036640 Cucumis sativus L. HOM05D004632 ORTHO05D005556 8.6e-192 674.5 673 80.1
Sopen06g024220 Solanum pennellii HOM05D004632 ORTHO05D005556 8.6e-192 674.5 680 79.4
Potri.006G263400 Populus trichocarpa HOM05D004632 ORTHO05D005556 1.1e-191 674.1 675 79.0
MELO3C016968.2 Cucumis melo HOM05D004632 ORTHO05D005556 1.5e-191 673.7 673 80.2
MSTRG.9370 Avicennia marina HOM05D004632 ORTHO05D005556 7.3e-191 671.4 675 79.9
Solyc06g065700.3 Solanum lycopersicum HOM05D004632 ORTHO05D005556 3.6e-190 669.1 678 79.1
PSO063G4867 Papaver somniferum HOM05D004632 ORTHO05D005556 6.2e-190 668.3 676 78.8
Aqoxy7G03810 Aquilegia oxysepala HOM05D004632 ORTHO05D005556 1.1e-189 667.5 675 79.6
CiPaw.07G229300 Carya illinoinensis HOM05D004632 ORTHO05D005556 1.1e-189 667.5 679 79.7
Sed0004025 Sechium edule HOM05D004632 ORTHO05D005556 1.4e-189 667.2 674 79.4
RcHm_v2.0_Chr6g0299541 Rosa chinensis HOM05D004632 ORTHO05D005556 8.9e-189 664.5 675 79.9
Manes.16G128700 Manihot esculenta HOM05D004632 ORTHO05D005556 1.5e-188 663.7 672 79.3
EL10Ac1g00704 Beta vulgaris HOM05D004632 ORTHO05D005556 2.0e-188 663.3 681 76.7
Migut.N00603 Erythranthe guttata HOM05D004632 ORTHO05D005556 5.8e-188 661.8 672 79.6
Potri.018G020200 Populus trichocarpa HOM05D004632 ORTHO05D005556 5.8e-188 661.8 675 78.1
DCAR_015265 Daucus carota HOM05D004632 ORTHO05D005556 2.2e-187 659.8 680 78.7
Lalb_Chr23g0268241 Lupinus albus HOM05D004632 ORTHO05D005556 2.9e-187 659.4 675 78.7
Ciclev10007613m.g Citrus clementina HOM05D004632 ORTHO05D005556 6.4e-187 658.3 675 79.6
TWI32G0830 Tripterygium wilfordii HOM05D004632 ORTHO05D005556 6.4e-187 658.3 678 78.0
HanXRQChr03g0084861 Helianthus annuus HOM05D004632 ORTHO05D005556 1.1e-186 657.5 671 78.4
Sabra06G0205900 Salix brachista HOM05D004632 ORTHO05D005556 2.1e-185 653.3 673 77.9
Phvul.009G087600 Phaseolus vulgaris HOM05D004632 ORTHO05D005556 6.0e-185 651.7 675 78.4
FAN20G1191 Fragaria x ananassa HOM05D004632 ORTHO05D005556 1.3e-184 650.6 690 77.0
Psat5g032640 Pisum sativum HOM05D004632 ORTHO05D005556 1.7e-184 650.2 675 77.3
FvH4_2g41020 Fragaria vesca HOM05D004632 ORTHO05D005556 2.3e-184 649.8 676 78.1
Medtr3g106080 Medicago truncatula HOM05D004632 ORTHO05D005556 3.0e-184 649.4 675 78.4
FAN20G0152 Fragaria x ananassa HOM05D004632 ORTHO05D005556 6.6e-184 648.3 689 76.8
ECA240G3507 Erigeron canadensis HOM05D004632 ORTHO05D005556 2.5e-183 646.4 672 78.0
VMungo1309G0882 Vigna mungo HOM05D004632 ORTHO05D005556 2.5e-183 646.4 673 77.9
arahy.Tifrunner.gnm1.ann1.8PBG0P Arachis hypogaea HOM05D004632 ORTHO05D005556 4.3e-183 645.6 674 78.0
Ca_15774_v3 Cicer arietinum L. HOM05D004632 ORTHO05D005556 9.5e-183 644.4 675 77.5
Duzib168G2284 Durio zibethinus HOM05D004632 ORTHO05D005556 9.5e-183 644.4 668 79.3
arahy.Tifrunner.gnm1.ann1.21LKMJ Arachis hypogaea HOM05D004632 ORTHO05D005556 1.2e-182 644.0 461 71.8
Lsat_1_v5_gn_6_77900 Lactuca sativa HOM05D004632 ORTHO05D005556 2.8e-182 642.9 679 77.8
MBI15_g05236_MAGBIO Magnolia biondii HOM05D004632 ORTHO05D005556 2.8e-182 642.9 460 72.2
ClCG05G016370 Citrullus lanatus HOM05D004632 ORTHO05D005556 3.6e-182 642.5 680 78.1
Glyma.06G062300 Glycine max HOM05D004632 ORTHO05D005556 3.6e-182 642.5 673 77.9
Lj1g0022186 Lotus japonicus HOM05D004632 ORTHO05D005556 4.7e-182 642.1 673 78.0
Glyma.04G061600 Glycine max HOM05D004632 ORTHO05D005556 8.1e-182 641.3 674 77.7
SGA_v2.0_scaffold40G15680 Striga asiatica HOM05D004632 ORTHO05D005556 8.9e-181 637.9 712 75.0
Lsat_1_v5_gn_7_4261 Lactuca sativa HOM05D004632 ORTHO05D005556 3.4e-180 636.0 464 71.3
MD00G1143300 Malus domestica HOM05D004632 ORTHO05D005556 3.4e-180 636.0 462 72.1
TPR.G1835 Trifolium pratense HOM05D004632 ORTHO05D005556 4.4e-180 635.6 675 77.2
Atru.chr7.2537 Acer truncatum HOM05D004632 ORTHO05D005556 5.8e-180 635.2 683 77.3
Ah.05g177560 Amaranthus hybridus HOM05D004632 ORTHO05D005556 6.4e-179 631.7 473 70.0
Lj7A732T26 Lonicera japonica HOM05D004632 ORTHO05D005556 1.4e-178 630.6 652 75.3
FAN27G1200 Fragaria x ananassa HOM05D004632 ORTHO05D005556 2.7e-177 626.3 461 69.8
PGR042G1415 Punica granatum HOM05D004632 ORTHO05D005556 1.7e-176 623.6 677 77.7
Eucgr.C02661 Eucalyptus grandis HOM05D004632 ORTHO05D005556 2.5e-175 619.8 689 76.2
Nitab4.5_0007182g0050 Nicotiana tabacum HOM05D004632 ORTHO05D005556 3.6e-174 615.9 460 71.3
ATR0739G094 Amborella trichopoda HOM05D004632 ORTHO05D005556 1.8e-173 613.6 672 76.2
Cpa.g.sc127.22 Carica papaya HOM05D004632 ORTHO05D005556 2.2e-171 606.7 460 67.6
Gohir.A05G058900 Gossypium hirsutum HOM05D004632 ORTHO05D005556 2.9e-171 606.3 670 76.7
BcaB04g19812 Brassica carinata HOM05D004632 ORTHO05D005556 1.4e-170 604.0 673 75.5
Nitab4.5_0003976g0020 Nicotiana tabacum HOM05D004632 ORTHO05D005556 1.7e-168 597.0 732 68.0
A09p06280 Brassica napus HOM05D004632 ORTHO05D005556 5.1e-168 595.5 672 75.0
BolC9t53613H Brassica oleracea HOM05D004632 ORTHO05D005556 5.1e-168 595.5 672 74.7
BraA09t36273Z Brassica rapa HOM05D004632 ORTHO05D005556 6.6e-168 595.1 672 75.0
CSS0046974 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 6.6e-168 595.1 618 79.4
Gohir.A07G031900 Gossypium hirsutum HOM05D004632 ORTHO05D005556 9.6e-167 591.3 670 76.1
C09p06950 Brassica napus HOM05D004632 ORTHO05D005556 8.1e-166 588.2 672 74.4
BcaC04g23574 Brassica carinata HOM05D004632 ORTHO05D005556 1.4e-165 587.4 672 74.4
MSTRG.4644 Avicennia marina HOM05D004632 ORTHO05D005556 1.8e-165 587.0 673 74.9
Gorai.001G037500 Gossypium raimondii HOM05D004632 ORTHO05D005556 2.4e-165 586.6 667 75.6
Gohir.D07G035600 Gossypium hirsutum HOM05D004632 ORTHO05D005556 2.6e-164 583.2 670 75.2
THA.LOC104814991 Tarenaya hassleriana HOM05D004632 ORTHO05D005556 2.6e-164 583.2 680 73.5
HPP92_014401 Vanilla planifolia HOM05D004632 ORTHO05D005556 4.2e-162 575.9 674 73.6
CDE05G3472 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 2.7e-161 573.2 672 64.0
AUR62023356 Chenopodium quinoa HOM05D004632 ORTHO05D005556 4.6e-161 572.4 675 69.8
AT5G25150 Arabidopsis thaliana HOM05D004632 ORTHO05D005556 3.0e-160 569.7 672 73.7
VMungo0647G2075 Vigna mungo HOM05D004632 ORTHO05D005556 1.5e-159 567.4 460 63.0
Sp2g22380 Schrenkiella parvula HOM05D004632 ORTHO05D005556 2.5e-159 566.6 672 73.2
Phvul.001G042300 Phaseolus vulgaris HOM05D004632 ORTHO05D005556 3.3e-159 566.2 460 62.8
BolC2t12041H Brassica oleracea HOM05D004632 ORTHO05D005556 2.8e-158 563.1 675 72.6
Os06g0649500 Oryza sativa ssp. japonica HOM05D004632 ORTHO05D005556 8.1e-158 561.6 672 72.3
vmacro11252 Vaccinium macrocarpon HOM05D004632 ORTHO05D005556 1.8e-157 560.5 602 64.1
Carub.0006s2297 Capsella rubella HOM05D004632 ORTHO05D005556 4.0e-157 559.3 672 73.8
AUR62013801 Chenopodium quinoa HOM05D004632 ORTHO05D005556 6.9e-157 558.5 618 73.0
Thhalv10003767m.g Eutrema salsugineum HOM05D004632 ORTHO05D005556 9.0e-157 558.1 673 73.6
SalBow1G2567 Salvia bowleyana HOM05D004632 ORTHO05D005556 2.0e-156 557.0 388 75.5
Glyma.17G222200 Glycine max HOM05D004632 ORTHO05D005556 3.4e-156 556.2 672 70.7
Hund27424 Selenicereus undatus HOM05D004632 ORTHO05D005556 2.2e-155 553.5 580 54.5
Thecc.09G016800 Theobroma cacao HOM05D004632 ORTHO05D005556 4.9e-155 552.4 571 83.2
BraA02t08956Z Brassica rapa HOM05D004632 ORTHO05D005556 3.2e-154 549.7 673 72.4
A02p39940 Brassica napus HOM05D004632 ORTHO05D005556 7.1e-154 548.5 673 72.2
C02p59830 Brassica napus HOM05D004632 ORTHO05D005556 9.3e-154 548.1 675 71.7
Aa31LG11G4400 Aethionema arabicum HOM05D004632 ORTHO05D005556 1.8e-152 543.9 464 63.1
Haze_21427 Corylus avellana HOM05D004632 ORTHO05D005556 1.5e-151 540.8 463 65.2
CARHR188340 Cardamine hirsuta HOM05D004632 ORTHO05D005556 3.3e-151 539.7 459 62.1
TAR626G1191 Trochodendron aralioides HOM05D004632 ORTHO05D005556 6.2e-150 535.4 553 84.8
BcaB07g29936 Brassica carinata HOM05D004632 ORTHO05D005556 2.7e-145 520.0 458 59.8
AL6G36810 Arabidopsis lyrata HOM05D004632 ORTHO05D005556 1.9e-143 513.8 443 62.5
Zm00001eb388650 Zea mays HOM05D004632 ORTHO05D005556 2.0e-140 503.8 569 78.0
Oeu061252.3 Olea europaea HOM05D004632 ORTHO05D005556 4.2e-130 469.5 709 66.3
Mapoly0009s0169 Marchantia polymorpha HOM05D004632 ORTHO05D005556 2.0e-127 460.7 681 64.5
BcaC03g17924 Brassica carinata HOM05D004632 ORTHO05D005556 2.6e-127 460.3 675 67.1
TAR625G0176 Trochodendron aralioides HOM05D004632 ORTHO05D005556 5.9e-124 449.1 356 68.5
Pp3c12_23330 Physcomitrium patens HOM05D004632 ORTHO05D005556 3.2e-122 443.4 464 51.5
Gohir.D05G060932 Gossypium hirsutum HOM05D004632 ORTHO05D005556 3.1e-117 426.8 633 57.7
CSS0042581 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 1.7e-115 421.0 293 77.5
MD15G1039100 Malus domestica HOM05D004632 ORTHO05D005556 3.2e-114 416.8 317 70.3
Oeu013659.1 Olea europaea HOM05D004632 ORTHO05D005556 8.0e-113 412.1 278 76.3
SMO118G0104 Selaginella moellendorffii HOM05D004632 ORTHO05D005556 5.2e-104 382.9 400 51.2
Actinidia13189 Actinidia chinensis HOM05D004632 ORTHO05D005556 3.4e-95 353.6 678 60.6
COL.COLO4_18941 Corchorus olitorius HOM05D004632 ORTHO05D005556 7.3e-66 256.1 388 44.6
Zm00001eb259920 Zea mays HOM05D004632 ORTHO05D005556 2.8e-65 254.2 193 68.4
PRCOL_00000651 Prasinoderma coloniale HOM05D004632 ORTHO05D005556 2.4e-61 241.1 468 34.4
Sed0017212 Sechium edule HOM05D004632 ORTHO05D005556 8.1e-57 226.1 571 47.6
Dinv40981 Davidia involucrata HOM05D004632 ORTHO05D005556 5.2e-56 223.4 278 51.8
SEGI_13945 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 3.2e-53 214.2 169 62.1
MD15G1039000 Malus domestica HOM05D004632 ORTHO05D005556 1.2e-52 212.2 148 72.3
MCO11G306 Micromonas commoda HOM05D004632 ORTHO05D005556 1.6e-52 211.8 479 31.5
CBR_g41144 Chara braunii HOM05D004632 ORTHO05D005556 4.6e-52 210.3 194 52.1
VMungo1309G1582 Vigna mungo HOM05D004632 ORTHO05D005556 1.3e-49 202.2 136 73.5
CDE05G1210 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 8.1e-49 199.5 142 69.7
Manes.03G009801 Manihot esculenta HOM05D004632 ORTHO05D005556 1.2e-47 195.7 295 45.4
MCO11G293 Micromonas commoda HOM05D004632 ORTHO05D005556 2.9e-46 191.0 525 28.8
SEGI_28232 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 2.4e-45 188.0 176 60.2
CDE05G3588 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 2.4e-40 171.4 124 67.7
AagrBONN_evm.TU.Sc2ySwM_228.3176 Anthoceros agrestis HOM05D003428 ORTHO05D004131 1.4e-37 162.2 145 52.4
Actinidia10511 Actinidia chinensis HOM05D004632 ORTHO05D005556 2.7e-36 157.9 152 54.6
CBR_g39739 Chara braunii HOM05D004632 ORTHO05D005556 5.1e-35 153.7 289 37.0
PSO541G0014 Papaver somniferum HOM05D004632 ORTHO05D005556 6.7e-35 153.3 116 69.0
Hma1.2p1_0059F.1_g032640 Hydrangea macrophylla HOM05D004632 ORTHO05D005556 9.0e-32 142.9 294 88.8
Actinidia09762 Actinidia chinensis HOM05D004632 ORTHO05D005556 4.8e-25 120.6 66 86.4
Glyma.14G103500 Glycine max HOM05D004632 ORTHO05D005556 3.8e-22 110.9 113 53.1
Actinidia10512 Actinidia chinensis HOM05D004632 ORTHO05D005556 7.2e-21 106.7 88 68.2
Cre12.g526950 Chlamydomonas reinhardtii HOM05D004632 ORTHO05D005556 9.4e-21 106.3 519 23.9
Sabra18G0022500 Salix brachista HOM05D004632 ORTHO05D005556 6.7e-19 100.1 286 32.2
SEGI_30848 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 5.7e-18 97.1 75 62.7
Cfa022837 Carpinus fangiana HOM05D004632 ORTHO05D005556 5.0e-14 84.0 501 24.2
SEGI_29407 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 1.1e-13 82.8 53 67.9
MD15G1038900 Malus domestica HOM05D004632 ORTHO05D005556 1.4e-13 82.4 56 75.0
FAN15G3250 Fragaria x ananassa HOM05D004632 ORTHO05D005556 1.6e-12 79.0 53 75.5
Haze_26425 Corylus avellana HOM05D004632 ORTHO05D005556 6.1e-12 77.0 178 30.9
Dinv40325 Davidia involucrata HOM05D004632 ORTHO05D005556 2.8e-09 68.2 37 83.8
Glyma.14G103600 Glycine max HOM05D004632 ORTHO05D005556 9.1e-08 63.2 43 69.8
Actinidia36729 Actinidia chinensis HOM05D004632 ORTHO05D005556 3.4e-07 61.2 151 31.1
Zm00001eb086350 Zea mays HOM05D008576 ORTHO05D000385 4.5e-07 60.8 50 72.0
Os07g0205200 Oryza sativa ssp. japonica HOM05D004632 ORTHO05D005556 5.9e-07 60.5 87 40.2
Zm00001eb239900 Zea mays HOM05D004632 ORTHO05D005556 1.0e-06 59.7 61 63.9
SEGI_21073 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 3.8e-06 57.8 54 57.4


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