Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc09_g04510 Coffea canephora HOM05D004929 ORTHO05D006492 7.3e-206 720.3 358 100.0
Dinv25726 Davidia involucrata HOM05D004929 ORTHO05D006492 9.6e-174 613.6 353 83.6
Nn8g40033 Nelumbo nucifera HOM05D004929 ORTHO05D006492 2.8e-173 612.1 359 81.6
SalBow7G3047 Salvia bowleyana HOM05D004929 ORTHO05D006492 5.8e-171 604.4 358 80.2
TAR633G2310 Trochodendron aralioides HOM05D004929 ORTHO05D006492 1.1e-169 600.1 347 83.0
Nitab4.5_0001860g0030 Nicotiana tabacum HOM05D004929 ORTHO05D006492 1.9e-169 599.4 351 80.9
Solyc02g093440.4 Solanum lycopersicum HOM05D004929 ORTHO05D006492 4.2e-169 598.2 351 80.6
CAN.G473.20 Capsicum annuum HOM05D004929 ORTHO05D006492 1.2e-168 596.7 351 80.9
Peaxi162Scf03028g00012 Petunia axillaris HOM05D004929 ORTHO05D006492 1.2e-168 596.7 351 80.6
Sopen02g038230 Solanum pennellii HOM05D004929 ORTHO05D006492 1.6e-168 596.3 351 80.6
Peaxi162Scf00129g01650 Petunia axillaris HOM05D004929 ORTHO05D006492 4.6e-168 594.7 351 80.3
Actinidia05982 Actinidia chinensis HOM05D004929 ORTHO05D006492 7.8e-168 594.0 346 81.2
Lju41A43T26 Lonicera japonica HOM05D004929 ORTHO05D006492 7.8e-168 594.0 350 80.9
Duzib147G0164 Durio zibethinus HOM05D004929 ORTHO05D006492 3.0e-167 592.0 355 79.7
GSVIVG01032385001 Vitis vinifera HOM05D004929 ORTHO05D006492 3.0e-167 592.0 350 80.9
Ciclev10015593m.g Citrus clementina HOM05D004929 ORTHO05D006492 1.1e-166 590.1 353 80.5
Peaxi162Scf00080g01316 Petunia axillaris HOM05D004929 ORTHO05D005557 1.1e-166 590.1 350 78.9
MSTRG.3138 Avicennia marina HOM05D004929 ORTHO05D006492 4.3e-166 588.2 356 79.2
Sabra16G0222700 Salix brachista HOM05D004929 ORTHO05D006492 7.3e-166 587.4 350 78.9
Manes.15G151900 Manihot esculenta HOM05D004929 ORTHO05D006492 1.3e-165 586.6 352 79.5
PGSC0003DMG400012608 Solanum tuberosum HOM05D004929 ORTHO05D006492 1.3e-165 586.6 351 79.2
CiPaw.03G045500 Carya illinoinensis HOM05D004929 ORTHO05D006492 2.8e-165 585.5 346 81.5
Prupe.3G293800 Prunus persica HOM05D004929 ORTHO05D006492 2.8e-165 585.5 352 80.1
Thecc.04G019500 Theobroma cacao HOM05D004929 ORTHO05D006492 2.8e-165 585.5 355 78.6
Potri.001G343400 Populus trichocarpa HOM05D004929 ORTHO05D006492 3.6e-165 585.1 353 78.2
vmacro05876 Vaccinium macrocarpon HOM05D004929 ORTHO05D006492 3.6e-165 585.1 351 79.2
ClCG09G019380 Citrullus lanatus HOM05D004929 ORTHO05D006492 1.4e-164 583.2 355 77.7
FvH4_6g51800 Fragaria vesca HOM05D004929 ORTHO05D006492 1.4e-164 583.2 354 79.7
MELO3C021592.2 Cucumis melo HOM05D004929 ORTHO05D006492 1.8e-164 582.8 355 77.7
Migut.K01411 Erythranthe guttata HOM05D004929 ORTHO05D006492 2.4e-164 582.4 359 76.9
MD09G1023000 Malus domestica HOM05D004929 ORTHO05D006492 4.0e-164 581.6 348 80.2
FAN09G2944 Fragaria x ananassa HOM05D004929 ORTHO05D006492 5.3e-164 581.3 354 79.4
FAN14G2766 Fragaria x ananassa HOM05D004929 ORTHO05D006492 5.3e-164 581.3 354 79.7
QL02p074005 Quercus lobata HOM05D004929 ORTHO05D006492 5.3e-164 581.3 350 79.4
Cfa007339 Carpinus fangiana HOM05D004929 ORTHO05D006492 1.5e-163 579.7 350 79.7
Rhsim10G0014700 Rhododendron simsii HOM05D004929 ORTHO05D006492 1.5e-163 579.7 358 78.5
CsaV3_5G027030 Cucumis sativus L. HOM05D004929 ORTHO05D006492 5.8e-163 577.8 354 77.4
PSO699G0033 Papaver somniferum HOM05D004929 ORTHO05D006492 1.3e-162 576.6 345 78.0
Haze_14758 Corylus avellana HOM05D004929 ORTHO05D006492 2.2e-162 575.9 348 79.9
CiPaw.04G029600 Carya illinoinensis HOM05D004929 ORTHO05D006492 2.9e-162 575.5 348 79.3
MD17G1022300 Malus domestica HOM05D004929 ORTHO05D006492 3.8e-162 575.1 348 79.6
PSO384G0906 Papaver somniferum HOM05D004929 ORTHO05D006492 3.8e-162 575.1 346 78.0
RcHm_v2.0_Chr2g0173281 Rosa chinensis HOM05D004929 ORTHO05D006492 3.8e-162 575.1 347 80.4
Sed0027438 Sechium edule HOM05D004929 ORTHO05D006492 6.4e-162 574.3 356 76.7
THA.LOC104821096 Tarenaya hassleriana HOM05D004929 ORTHO05D006492 1.1e-161 573.5 355 76.3
FAN05G4087 Fragaria x ananassa HOM05D004929 ORTHO05D006492 1.9e-161 572.8 347 80.1
Aqoxy5G00914 Aquilegia oxysepala HOM05D004929 ORTHO05D006492 3.2e-161 572.0 348 77.9
Hund23289 Selenicereus undatus HOM05D004929 ORTHO05D006492 1.2e-160 570.1 356 76.1
Thhalv10020980m.g Eutrema salsugineum HOM05D004929 ORTHO05D006492 1.6e-160 569.7 354 76.3
Sed0020215 Sechium edule HOM05D004929 ORTHO05D006492 1.6e-160 569.7 355 76.1
PGR142G3088 Punica granatum HOM05D004929 ORTHO05D006492 2.7e-160 568.9 354 76.3
Gorai.006G034800 Gossypium raimondii HOM05D004929 ORTHO05D006492 4.6e-160 568.2 347 77.5
Lsat_1_v5_gn_0_18301 Lactuca sativa HOM05D004929 ORTHO05D006492 6.0e-160 567.8 350 76.0
FAN02G0047 Fragaria x ananassa HOM05D004929 ORTHO05D006492 1.0e-159 567.0 366 76.0
Gohir.D09G029800 Gossypium hirsutum HOM05D004929 ORTHO05D006492 1.3e-159 566.6 347 76.9
CANSAT64G1903 Cannabis sativa HOM05D004929 ORTHO05D006492 1.8e-159 566.2 350 77.1
HanXRQChr17g0548641 Helianthus annuus HOM05D004929 ORTHO05D006492 1.8e-159 566.2 355 76.6
EL10Ac6g14097 Beta vulgaris HOM05D004929 ORTHO05D006492 3.0e-159 565.5 350 76.3
Gohir.A09G030100 Gossypium hirsutum HOM05D004929 ORTHO05D006492 3.0e-159 565.5 347 76.7
Sp3g00410 Schrenkiella parvula HOM05D004929 ORTHO05D006492 3.0e-159 565.5 353 75.6
Aqoxy4G03095 Aquilegia oxysepala HOM05D004929 ORTHO05D006492 3.9e-159 565.1 354 75.1
AL3G10510 Arabidopsis lyrata HOM05D004929 ORTHO05D006492 3.9e-159 565.1 352 75.3
BcaC01g04530 Brassica carinata HOM05D004929 ORTHO05D006492 3.9e-159 565.1 346 76.6
Aa31LG5G10780 Aethionema arabicum HOM05D004929 ORTHO05D006492 6.7e-159 564.3 350 76.9
BraA03t12414Z Brassica rapa HOM05D004929 ORTHO05D006492 1.5e-158 563.1 346 76.0
C03p39500 Brassica napus HOM05D004929 ORTHO05D006492 2.5e-158 562.4 346 76.0
DCAR_021732 Daucus carota HOM05D004929 ORTHO05D006492 2.5e-158 562.4 340 79.7
HanXRQChr17g0548651 Helianthus annuus HOM05D004929 ORTHO05D006492 3.3e-158 562.0 345 77.4
AT3G01640 Arabidopsis thaliana HOM05D004929 ORTHO05D006492 7.4e-158 560.8 352 74.7
A03p32440 Brassica napus HOM05D004929 ORTHO05D006492 9.6e-158 560.5 346 76.0
Cpa.g.sc108.76 Carica papaya HOM05D003450 ORTHO05D004150 2.1e-157 559.3 345 76.2
BolC3t16218H Brassica oleracea HOM05D004929 ORTHO05D006492 2.8e-157 558.9 346 75.4
TWI56G0780 Tripterygium wilfordii HOM05D004929 ORTHO05D006492 8.1e-157 557.4 349 75.4
HPP92_015407 Vanilla planifolia HOM05D004929 ORTHO05D006492 1.4e-156 556.6 348 75.3
CARHR075280 Cardamine hirsuta HOM05D004929 ORTHO05D006492 3.1e-156 555.4 353 73.7
ECA246G1179 Erigeron canadensis HOM05D004929 ORTHO05D006492 6.9e-156 554.3 362 74.9
TWI12G0632 Tripterygium wilfordii HOM05D004929 ORTHO05D006492 9.0e-156 553.9 348 76.4
Thhalv10013912m.g Eutrema salsugineum HOM05D004929 ORTHO05D006492 1.5e-155 553.1 354 73.4
MBI05_g22077_MAGBIO Magnolia biondii HOM05D004929 ORTHO05D006492 4.5e-155 551.6 355 75.8
AL6G25200 Arabidopsis lyrata HOM05D004929 ORTHO05D006492 1.3e-154 550.1 356 73.3
Carub.0003s0042 Capsella rubella HOM05D004929 ORTHO05D006492 1.1e-153 547.0 346 74.0
CARHR198840 Cardamine hirsuta HOM05D004929 ORTHO05D006492 1.1e-153 547.0 356 72.8
Ah.03g137000 Amaranthus hybridus HOM05D004929 ORTHO05D006492 1.4e-153 546.6 356 72.8
BraA10t44472Z Brassica rapa HOM05D004929 ORTHO05D006492 1.4e-153 546.6 351 74.1
Glyma.05G002500 Glycine max HOM05D004929 ORTHO05D006492 2.4e-153 545.8 351 74.6
arahy.Tifrunner.gnm1.ann1.NF5K9F Arachis hypogaea HOM05D004929 ORTHO05D006492 3.2e-153 545.4 351 74.9
Phvul.004G004700 Phaseolus vulgaris HOM05D004929 ORTHO05D006492 3.2e-153 545.4 350 75.7
arahy.Tifrunner.gnm1.ann1.FEY4ZS Arachis hypogaea HOM05D004929 ORTHO05D006492 5.5e-153 544.7 351 74.6
Carub.0006s1265 Capsella rubella HOM05D004929 ORTHO05D006492 5.5e-153 544.7 353 73.4
AT5G14470 Arabidopsis thaliana HOM05D004929 ORTHO05D006492 2.1e-152 542.7 356 71.6
VMungo0464G1388 Vigna mungo HOM05D004929 ORTHO05D006492 4.6e-152 541.6 350 74.9
TPR.G31950 Trifolium pratense HOM05D004929 ORTHO05D006492 6.0e-152 541.2 355 74.6
Duzib264G0638 Durio zibethinus HOM05D004929 ORTHO05D006492 1.8e-151 539.7 383 69.7
AUR62008872 Chenopodium quinoa HOM05D004929 ORTHO05D006492 3.9e-151 538.5 357 72.8
Medtr6g004430 Medicago truncatula HOM05D004929 ORTHO05D006492 3.9e-151 538.5 345 75.7
Lalb_Chr06g0176621 Lupinus albus HOM05D004929 ORTHO05D006492 1.9e-150 536.2 349 73.1
Lj2g0024676 Lotus japonicus HOM05D004929 ORTHO05D006492 2.5e-150 535.8 351 73.5
BcaB08g36997 Brassica carinata HOM05D004929 ORTHO05D006492 3.3e-150 535.4 359 72.1
Ca_04143_v3 Cicer arietinum L. HOM05D004929 ORTHO05D006492 2.1e-149 532.7 353 73.9
Oeu018151.1 Olea europaea HOM05D004929 ORTHO05D006492 2.1e-149 532.7 354 74.9
Zm00001eb025800 Zea mays HOM05D004929 ORTHO05D006492 5.3e-148 528.1 347 73.5
AUR62031837 Chenopodium quinoa HOM05D004929 ORTHO05D006492 9.0e-148 527.3 397 65.7
ATR0827G043 Amborella trichopoda HOM05D004929 ORTHO05D006492 1.0e-146 523.9 372 69.6
Os11g0217300 Oryza sativa ssp. japonica HOM05D004929 ORTHO05D006492 3.0e-143 512.3 340 72.4
arahy.Tifrunner.gnm1.ann1.BJ3QP1 Arachis hypogaea HOM05D004929 ORTHO05D006492 1.6e-141 506.5 318 77.4
BcaC04g19032 Brassica carinata HOM05D004929 ORTHO05D006492 6.9e-140 501.1 352 69.9
BcaB08g36995 Brassica carinata HOM05D004929 ORTHO05D006492 3.2e-137 492.3 358 68.4
COL.COLO4_29172 Corchorus olitorius HOM05D004929 ORTHO05D006492 2.3e-135 486.1 355 67.6
SHI00354 Sapria himalayana HOM05D004929 ORTHO05D006492 2.5e-134 482.6 341 67.2
SGA_v2.0_scaffold30G12409 Striga asiatica HOM05D004929 ORTHO05D006492 9.7e-134 480.7 276 83.3
Dinv33427 Davidia involucrata HOM05D004929 ORTHO05D006492 3.7e-133 478.8 278 82.4
Eucgr.I01731 Eucalyptus grandis HOM05D004929 ORTHO05D006492 1.4e-132 476.9 286 78.7
Nitab4.5_0006683g0060 Nicotiana tabacum HOM05D004929 ORTHO05D006492 1.6e-128 463.4 349 66.2
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 3.9e-127 458.8 276 79.7
A10p24090 Brassica napus HOM05D004929 ORTHO05D006492 1.7e-125 453.4 353 62.3
SMO145G0043 Selaginella moellendorffii HOM05D004929 ORTHO05D006492 3.7e-125 452.2 333 64.3
Sc03g0007290 Simmondsia chinensis HOM05D004929 ORTHO05D006492 8.5e-122 441.0 269 77.7
HPP92_026990 Vanilla planifolia HOM05D004929 ORTHO05D006492 3.3e-118 429.1 270 75.6
AagrBONN_evm.TU.Sc2ySwM_228.449 Anthoceros agrestis HOM05D000718 ORTHO05D002712 9.1e-116 421.0 298 67.1
Psat1g053480 Pisum sativum HOM05D004929 ORTHO05D006492 3.2e-113 412.5 268 73.9
SGA_v2.0_scaffold47G17516 Striga asiatica HOM05D004929 ORTHO05D006492 8.8e-111 404.4 338 62.7
Mapoly0023s0058 Marchantia polymorpha HOM05D004929 ORTHO05D006492 3.3e-110 402.5 349 59.0
CBR_g3618 Chara braunii HOM05D004929 ORTHO05D006492 6.3e-109 398.3 345 58.6
Atru.chr6.2430 Acer truncatum HOM05D004929 ORTHO05D006492 1.3e-106 390.6 235 79.6
ATR0681G379 Amborella trichopoda HOM05D004929 ORTHO05D006492 4.7e-104 382.1 259 73.0
Pp3c22_9380 Physcomitrium patens HOM05D004929 ORTHO05D006492 2.6e-102 376.3 270 65.9
SHI25478 Sapria himalayana HOM05D004929 ORTHO05D006492 2.9e-98 362.8 283 63.6
BolC9t59108H Brassica oleracea HOM05D004929 ORTHO05D006492 6.3e-93 345.1 360 51.4
C09p62710 Brassica napus HOM05D004929 ORTHO05D006492 3.1e-92 342.8 351 51.6
CDE07G0337 Ceratophyllum demersum HOM05D004929 ORTHO05D006492 1.2e-91 340.9 209 76.1
Nitab4.5_0000040g0670 Nicotiana tabacum HOM05D004929 ORTHO05D006492 2.7e-91 339.7 351 54.1
Cre02.g107600 Chlamydomonas reinhardtii HOM05D004929 ORTHO05D006492 7.3e-89 331.6 357 50.4
PRCOL_00005101 Prasinoderma coloniale HOM05D004929 ORTHO05D006492 2.6e-86 323.2 343 51.6
MCO09G795 Micromonas commoda HOM05D004929 ORTHO05D006492 1.2e-80 304.3 350 48.9
Nitab4.5_0001550g0030 Nicotiana tabacum HOM05D004929 ORTHO05D006492 3.4e-78 296.2 236 65.7
Oeu033729.3 Olea europaea HOM05D004929 ORTHO05D006492 1.7e-69 267.3 207 67.6
BcaB08g36982 Brassica carinata HOM05D004929 ORTHO05D006492 1.2e-64 251.1 167 71.3
MBI05_g01825_MAGBIO Magnolia biondii HOM05D004929 ORTHO05D006492 2.8e-64 250.0 223 58.7
MSTRG.3285 Avicennia marina HOM05D004929 ORTHO05D006492 4.4e-54 216.1 131 80.2
BolC9t59344H Brassica oleracea HOM05D004929 ORTHO05D006492 6.4e-53 212.2 195 57.9
Atru.chr6.2429 Acer truncatum HOM05D004929 ORTHO05D006492 7.3e-49 198.7 118 78.0
CDE07G1161 Ceratophyllum demersum HOM05D004929 ORTHO05D043891 5.5e-36 156.0 116 65.5
A10p26090 Brassica napus HOM05D004929 ORTHO05D006492 9.3e-28 128.6 188 43.6
MD17G1022500 Malus domestica HOM05D004929 ORTHO05D006492 1.1e-23 115.2 63 82.5
BcaNung06761 Brassica carinata HOM05D004929 ORTHO05D006492 5.3e-23 112.8 70 72.9
Sopen02g038030 Solanum pennellii HOM05D004929 ORTHO05D006492 9.0e-23 112.1 68 70.6
Sp6g29550 Schrenkiella parvula HOM05D004929 ORTHO05D043891 6.1e-19 99.4 65 67.7
arahy.Tifrunner.gnm1.ann1.6CI6DX Arachis hypogaea HOM05D004929 ORTHO05D031499 1.3e-08 65.1 44 61.4
Glyma.19G002700 Glycine max HOM05D004929 ORTHO05D215243 1.3e-08 65.1 85 45.9
arahy.Tifrunner.gnm1.ann1.XQCE19 Arachis hypogaea HOM05D004929 ORTHO05D031499 2.4e-07 60.8 43 55.8
CAN.G1057.11 Capsicum annuum HOM05D004929 ORTHO05D115892 2.6e-06 57.4 109 33.0


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