Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc09_g03120 Coffea canephora HOM05D000423 ORTHO05D000284 1.2e-22 109.0 57 100.0
Manes.09G184701 Manihot esculenta HOM05D000423 ORTHO05D000284 3.2e-07 57.8 56 50.0
Nitab4.5_0000316g0050 Nicotiana tabacum HOM05D000423 ORTHO05D000284 3.2e-07 57.8 56 51.8
Nitab4.5_0002801g0020 Nicotiana tabacum HOM05D000423 ORTHO05D000284 4.2e-07 57.4 56 51.8
CAN.G179.36 Capsicum annuum HOM05D000423 ORTHO05D000284 9.4e-07 56.2 55 52.7
Oeu062054.1 Olea europaea HOM05D000423 ORTHO05D000284 1.2e-06 55.8 37 70.3
Oeu062055.1 Olea europaea HOM05D000423 ORTHO05D000284 1.2e-06 55.8 37 70.3
Peaxi162Scf00309g00112 Petunia axillaris HOM05D000423 ORTHO05D000284 1.2e-06 55.8 56 51.8
Dinv02955 Davidia involucrata HOM05D000423 ORTHO05D000284 1.6e-06 55.5 56 53.6
PGSC0003DMG400017955 Solanum tuberosum HOM05D000423 ORTHO05D000284 1.6e-06 55.5 56 50.0
Duzib128G0255 Durio zibethinus HOM05D000423 ORTHO05D000284 2.1e-06 55.1 56 50.0
TAR633G0120 Trochodendron aralioides HOM05D000423 ORTHO05D000284 2.1e-06 55.1 56 53.6
Solyc01g068410.4 Solanum lycopersicum HOM05D000423 ORTHO05D000284 2.7e-06 54.7 56 48.2
Sopen01g030370 Solanum pennellii HOM05D000423 ORTHO05D000284 2.7e-06 54.7 56 48.2
FvH4_6g00660 Fragaria vesca HOM05D000423 ORTHO05D000284 3.6e-06 54.3 45 53.3
FAN02G1471 Fragaria x ananassa HOM05D000423 ORTHO05D000284 3.6e-06 54.3 45 53.3
FAN05G5271 Fragaria x ananassa HOM05D000423 ORTHO05D000284 3.6e-06 54.3 45 53.3
FAN09G1229 Fragaria x ananassa HOM05D000423 ORTHO05D000284 3.6e-06 54.3 45 53.3
FAN14G5277 Fragaria x ananassa HOM05D000423 ORTHO05D000284 3.6e-06 54.3 45 53.3
MD12G1259500 Malus domestica HOM05D000423 ORTHO05D000284 3.6e-06 54.3 45 53.3
Actinidia06810 Actinidia chinensis HOM05D000423 ORTHO05D000284 4.7e-06 53.9 56 51.8
Cpa.g.c26337.3 Carica papaya HOM05D000423 ORTHO05D000284 4.7e-06 53.9 51 54.9
Cfa006271 Carpinus fangiana HOM05D000421 ORTHO05D001007 4.7e-06 53.9 56 51.8
Haze_04541 Corylus avellana HOM05D000423 ORTHO05D000284 4.7e-06 53.9 56 51.8
Oeu034302.1 Olea europaea HOM05D000423 ORTHO05D000284 4.7e-06 53.9 49 57.1
RcHm_v2.0_Chr3g0448071 Rosa chinensis HOM05D000423 ORTHO05D000284 4.7e-06 53.9 45 53.3
ClCG11G010850 Citrullus lanatus HOM05D000423 ORTHO05D000284 6.1e-06 53.5 32 71.9
Cc10_g14830 Coffea canephora HOM05D000423 ORTHO05D000284 6.1e-06 53.5 56 50.0
Lj1A583G10 Lonicera japonica HOM05D000423 ORTHO05D000284 6.1e-06 53.5 56 50.0
Nitab4.5_0000083g0010 Nicotiana tabacum HOM05D000423 ORTHO05D000284 6.1e-06 53.5 42 57.1
SGA_v2.0_scaffold62G21328 Striga asiatica HOM05D000423 ORTHO05D000284 6.1e-06 53.5 38 63.2
GSVIVG01019126001 Vitis vinifera HOM05D000423 ORTHO05D000284 6.1e-06 53.5 56 50.0
BcaB01g04977 Brassica carinata HOM05D000423 ORTHO05D000284 7.9e-06 53.1 56 51.8
A03p07840 Brassica napus HOM05D000423 ORTHO05D000284 7.9e-06 53.1 56 51.8
C03p09060 Brassica napus HOM05D000423 ORTHO05D000284 7.9e-06 53.1 56 51.8
BolC3t13401H Brassica oleracea HOM05D000423 ORTHO05D000284 7.9e-06 53.1 56 51.8
BraA03t10111Z Brassica rapa HOM05D000423 ORTHO05D005676 7.9e-06 53.1 56 51.8
CsaV3_2G009610 Cucumis sativus L. HOM05D000423 ORTHO05D000284 7.9e-06 53.1 32 71.9
Sp6g27620 Schrenkiella parvula HOM05D000423 ORTHO05D000284 7.9e-06 53.1 56 51.8


User provided reference genes

Program Settings