Gene: Sopen01g030370
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen01g030370
- Transcript Identifier Sopen01g030370.1
- Gene Type Coding gene
- Location Spenn-ch01 : 87625767-87628081 : positive
Gene Family Information
- ID HOM05D000423
- #Genes/#Species 1212/97
- Phylogenetic origin
- ID ORTHO05D000284
- #Genes/#Species 1196/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen01g030370.1
Descriptions
- Description Encodes PIN5, an atypical member of the PIN family. PIN5 is a functional auxin transporter that is required for auxin-mediated development. PIN5 does not have a direct role in cell-to-cell transport but regulates intracellular auxin homeostasis and metabolism. PIN5 localizes, unlike other characterized plasma membrane PIN proteins, to endoplasmic reticulum (ER), presumably mediating auxin flow from the cytosol to the lumen of the ER. | PIN-FORMED 5 (PIN5) | CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup , Auxin efflux carrier | BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0055085 | IEA | InterPro | transmembrane transport | |
| GO:0010315 | ISO | PLAZA Integrative Orthology | auxin efflux | Solyc01g068410.4 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010329 | ISO | PLAZA Integrative Orthology | auxin efflux transmembrane transporter activity | Solyc01g068410.4 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | InterPro | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004776 | Membrane transport protein |
| Mapman id | Description |
|---|---|
| 11.2.4.1.1 | Phytohormone action.auxin.transport.polar auxin transport.auxin transporter (PIN) |
| 24.2.5.2.1 | Solute transport.carrier-mediated transport.BART superfamily.AEC family.auxin efflux transporter (PIN) |